RNA–Protein interactions for RNA: ENST00000513895.1

LINC00616-204, long intergenic non-protein coding RNA 616, humanhuman

TSL 3

Gene LINC00616, Length 566 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00616-204ENST00000513895 TMEM88BA6NKF7 163 aa8.29□□□□□ -1.08
LINC00616-204ENST00000513895 BMP3P12645 472 aa8.29□□□□□ -1.08
LINC00616-204ENST00000513895 CDK11BP21127 795 aaKnown RBP8.29□□□□□ -1.08
LINC00616-204ENST00000513895 NLRP12P59046 1061 aa8.29□□□□□ -1.08
LINC00616-204ENST00000513895 TMEM132EQ6IEE7 984 aa8.29□□□□□ -1.08
LINC00616-204ENST00000513895 BEND4Q6ZU67 534 aa8.29□□□□□ -1.08
LINC00616-204ENST00000513895 SLC26A8Q96RN1 970 aa8.29□□□□□ -1.08
LINC00616-204ENST00000513895 KCNF1Q9H3M0 494 aa8.29□□□□□ -1.08
LINC00616-204ENST00000513895 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.29□□□□□ -1.08
LINC00616-204ENST00000513895 METP08581 1390 aa8.29□□□□□ -1.08
LINC00616-204ENST00000513895 CHD2O14647 1828 aaKnown RBP8.29□□□□□ -1.08
LINC00616-204ENST00000513895 ROCK2O75116 1388 aaKnown RBP8.28□□□□□ -1.08
LINC00616-204ENST00000513895 PIK3R4Q99570 1358 aa8.28□□□□□ -1.08
LINC00616-204ENST00000513895 NFKBIEO00221 500 aa8.28□□□□□ -1.08
LINC00616-204ENST00000513895 ATCAYQ86WG3 371 aa8.28□□□□□ -1.08
LINC00616-204ENST00000513895 RUSC1Q9BVN2 902 aa8.28□□□□□ -1.08
LINC00616-204ENST00000513895 DZANK1Q9NVP4 752 aa8.28□□□□□ -1.08
LINC00616-204ENST00000513895 SLAIN2Q9P270 581 aa8.28□□□□□ -1.08
LINC00616-204ENST00000513895 PTPRUQ92729 1446 aa8.28□□□□□ -1.08
LINC00616-204ENST00000513895 LRPPRCP42704 1394 aaKnown RBP8.27□□□□□ -1.09
LINC00616-204ENST00000513895 RPLP1P05386 114 aaKnown RBP8.27□□□□□ -1.09
LINC00616-204ENST00000513895 FDX2Q6P4F2 183 aa8.27□□□□□ -1.09
LINC00616-204ENST00000513895 XKR5Q6UX68 686 aa8.27□□□□□ -1.09
LINC00616-204ENST00000513895 C1orf127Q8N9H9 656 aa8.27□□□□□ -1.09
LINC00616-204ENST00000513895 CARD11Q9BXL7 1154 aa8.27□□□□□ -1.09
LINC00616-204ENST00000513895 SEPT3Q9UH03 358 aa8.27□□□□□ -1.09
LINC00616-204ENST00000513895 SOX13Q9UN79 622 aa8.27□□□□□ -1.09
LINC00616-204ENST00000513895 YTHDC2Q9H6S0 1430 aaKnown RBP8.27□□□□□ -1.09
LINC00616-204ENST00000513895 KNDC1Q76NI1 1749 aa8.26□□□□□ -1.09
LINC00616-204ENST00000513895 ABCC11Q96J66 1382 aa8.26□□□□□ -1.09
LINC00616-204ENST00000513895 PDE2AO00408 941 aaPredicted RBP8.26□□□□□ -1.09
LINC00616-204ENST00000513895 WNT11O96014 354 aa8.26□□□□□ -1.09
LINC00616-204ENST00000513895 CES1P23141 567 aa8.26□□□□□ -1.09
LINC00616-204ENST00000513895 B4GALNT3Q6L9W6 998 aa8.26□□□□□ -1.09
LINC00616-204ENST00000513895 SLC7A3Q8WY07 619 aa8.26□□□□□ -1.09
LINC00616-204ENST00000513895 EDEM1Q92611 657 aa8.26□□□□□ -1.09
LINC00616-204ENST00000513895 PUS7Q96PZ0 661 aaKnown RBP8.26□□□□□ -1.09
LINC00616-204ENST00000513895 TECPR2O15040 1411 aa8.26□□□□□ -1.09
LINC00616-204ENST00000513895 XRN1Q8IZH2 1706 aaKnown RBP8.26□□□□□ -1.09
LINC00616-204ENST00000513895 DLC1Q96QB1 1528 aa8.25□□□□□ -1.09
LINC00616-204ENST00000513895 KRTAP4-8A0A0G2JLE6 195 aa8.25□□□□□ -1.09
LINC00616-204ENST00000513895 KCNA6P17658 529 aa8.25□□□□□ -1.09
LINC00616-204ENST00000513895 ATP2B4P23634 1241 aa8.25□□□□□ -1.09
LINC00616-204ENST00000513895 HHIPQ96QV1 700 aa8.25□□□□□ -1.09
LINC00616-204ENST00000513895 GNEQ9Y223 722 aaKnown RBP8.25□□□□□ -1.09
LINC00616-204ENST00000513895 RNF114Q9Y508 228 aa8.25□□□□□ -1.09
LINC00616-204ENST00000513895 NWD1Q149M9 1564 aa8.25□□□□□ -1.09
LINC00616-204ENST00000513895 STRCP1A6NGW2 1772 aa8.25□□□□□ -1.09
LINC00616-204ENST00000513895 ARHGEF28Q8N1W1 1705 aaKnown RBP8.24□□□□□ -1.09
LINC00616-204ENST00000513895 RBM47A0AV96 593 aaKnown RBP8.24□□□□□ -1.09
LINC00616-204ENST00000513895 MEGF11A6BM72 1044 aa8.24□□□□□ -1.09
LINC00616-204ENST00000513895 WDR64B1ANS9 1081 aa8.24□□□□□ -1.09
LINC00616-204ENST00000513895 GAS2O43903 313 aaKnown RBP8.24□□□□□ -1.09
LINC00616-204ENST00000513895 TRPA1O75762 1119 aa8.24□□□□□ -1.09
LINC00616-204ENST00000513895 YBX3P16989 372 aaKnown RBP eCLIP8.24□□□□□ -1.09
LINC00616-204ENST00000513895 MFSD14AQ96MC6 490 aa8.24□□□□□ -1.09
LINC00616-204ENST00000513895 CHRDQ9H2X0 955 aa8.24□□□□□ -1.09
LINC00616-204ENST00000513895 CPS1P31327 1500 aa8.24□□□□□ -1.09
LINC00616-204ENST00000513895 USP47Q96K76 1375 aa8.23□□□□□ -1.09
LINC00616-204ENST00000513895 FAM135BQ49AJ0 1406 aa8.23□□□□□ -1.09
LINC00616-204ENST00000513895 A6NHS1 94 aa8.23□□□□□ -1.09
LINC00616-204ENST00000513895 PDGFAP04085 211 aa8.23□□□□□ -1.09
LINC00616-204ENST00000513895 HSPA5P11021 654 aaKnown RBP8.23□□□□□ -1.09
LINC00616-204ENST00000513895 ARL4DP49703 201 aa8.23□□□□□ -1.09
LINC00616-204ENST00000513895 DNM1Q05193 864 aaKnown RBP8.23□□□□□ -1.09
LINC00616-204ENST00000513895 C19orf57Q0VDD7 668 aa8.23□□□□□ -1.09
LINC00616-204ENST00000513895 HGSNATQ68CP4 663 aa8.23□□□□□ -1.09
LINC00616-204ENST00000513895 TMEM102Q8N9M5 508 aaPredicted RBP8.23□□□□□ -1.09
LINC00616-204ENST00000513895 HELQQ8TDG4 1101 aa8.23□□□□□ -1.09
LINC00616-204ENST00000513895 STK26Q9P289 416 aa8.23□□□□□ -1.09
LINC00616-204ENST00000513895 TRAK1Q9UPV9 953 aa8.23□□□□□ -1.09
LINC00616-204ENST00000513895 ROBO2Q9HCK4 1378 aa8.22□□□□□ -1.09
LINC00616-204ENST00000513895 PTCH1Q13635 1447 aa8.22□□□□□ -1.09
LINC00616-204ENST00000513895 ST20-MTHFSA0A0A6YYL1 179 aa8.22□□□□□ -1.09
LINC00616-204ENST00000513895 PCSK2P16519 638 aa8.22□□□□□ -1.09
LINC00616-204ENST00000513895 MAP4P27816 1152 aaKnown RBP8.22□□□□□ -1.09
LINC00616-204ENST00000513895 HOXA10P31260 410 aaPredicted RBP8.22□□□□□ -1.09
LINC00616-204ENST00000513895 SGO2Q562F6 1265 aa8.22□□□□□ -1.09
LINC00616-204ENST00000513895 GGNBP2Q9H3C7 697 aa8.22□□□□□ -1.09
LINC00616-204ENST00000513895 PIM2Q9P1W9 311 aa8.22□□□□□ -1.09
LINC00616-204ENST00000513895 WAPLQ7Z5K2 1190 aa8.21□□□□□ -1.1
LINC00616-204ENST00000513895 PMEPA1Q969W9 287 aa8.21□□□□□ -1.1
LINC00616-204ENST00000513895 PRAM1Q96QH2 718 aa8.21□□□□□ -1.1
LINC00616-204ENST00000513895 TESK2Q96S53 571 aa8.21□□□□□ -1.1
LINC00616-204ENST00000513895 TMPRSS13Q9BYE2 586 aa8.21□□□□□ -1.1
LINC00616-204ENST00000513895 IGSF5Q9NSI5 407 aa8.21□□□□□ -1.1
LINC00616-204ENST00000513895 ADGRE2Q9UHX3 823 aa8.21□□□□□ -1.1
LINC00616-204ENST00000513895 EIF3AQ14152 1382 aaKnown RBP8.21□□□□□ -1.1
LINC00616-204ENST00000513895 PLEKHH1Q9ULM0 1364 aa8.21□□□□□ -1.1
LINC00616-204ENST00000513895 SBNO2Q9Y2G9 1366 aa8.21□□□□□ -1.1
LINC00616-204ENST00000513895 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.2□□□□□ -1.1
LINC00616-204ENST00000513895 NKTRP30414 1462 aaKnown RBP8.2□□□□□ -1.1
LINC00616-204ENST00000513895 ARID1BQ8NFD5 2236 aaPredicted RBP8.2□□□□□ -1.1
LINC00616-204ENST00000513895 SOX1O00570 391 aaPredicted RBP8.2□□□□□ -1.1
LINC00616-204ENST00000513895 MZF1P28698 734 aaPredicted RBP8.2□□□□□ -1.1
LINC00616-204ENST00000513895 C8orf34Q49A92 452 aa8.2□□□□□ -1.1
LINC00616-204ENST00000513895 NOM1Q5C9Z4 860 aaKnown RBP8.2□□□□□ -1.1
LINC00616-204ENST00000513895 NUTM2GQ5VZR2 741 aa8.2□□□□□ -1.1
LINC00616-204ENST00000513895 SMG8Q8ND04 991 aaKnown RBP8.2□□□□□ -1.1
LINC00616-204ENST00000513895 GIMAP7Q8NHV1 300 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms