RNA–Protein interactions for RNA: ENST00000513263.1

SKP2-207, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2

Gene SKP2, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-207ENST00000513263 DDTLA6NHG4 134 aaPredicted RBP13.47□□□□□ -0.25
SKP2-207ENST00000513263 TRIM75PA6NK02 468 aa13.47□□□□□ -0.25
SKP2-207ENST00000513263 TNPO2O14787 897 aaKnown RBP13.47□□□□□ -0.25
SKP2-207ENST00000513263 CYP2C8P10632 490 aa13.47□□□□□ -0.25
SKP2-207ENST00000513263 GJA8P48165 433 aa13.47□□□□□ -0.25
SKP2-207ENST00000513263 RHBDL3P58872 404 aa13.47□□□□□ -0.25
SKP2-207ENST00000513263 OS9Q13438 667 aaPredicted RBP13.47□□□□□ -0.25
SKP2-207ENST00000513263 IRF5Q13568 498 aa13.47□□□□□ -0.25
SKP2-207ENST00000513263 ZFPM1Q8IX07 1006 aa13.47□□□□□ -0.25
SKP2-207ENST00000513263 FRAT1Q92837 279 aaPredicted RBP13.47□□□□□ -0.25
SKP2-207ENST00000513263 TRIM34Q9BYJ4 488 aa13.47□□□□□ -0.25
SKP2-207ENST00000513263 DDX4Q9NQI0 724 aaKnown RBP13.47□□□□□ -0.25
SKP2-207ENST00000513263 NAV1Q8NEY1 1877 aa13.46□□□□□ -0.25
SKP2-207ENST00000513263 SZT2Q5T011 3432 aa13.46□□□□□ -0.25
SKP2-207ENST00000513263 ASNSP08243 561 aa13.46□□□□□ -0.25
SKP2-207ENST00000513263 PRKCZQ05513 592 aa13.46□□□□□ -0.25
SKP2-207ENST00000513263 TTC39AQ5SRH9 613 aa13.46□□□□□ -0.25
SKP2-207ENST00000513263 NAA16Q6N069 864 aaPredicted RBP13.46□□□□□ -0.25
SKP2-207ENST00000513263 SH3BP5LQ7L8J4 393 aa13.46□□□□□ -0.25
SKP2-207ENST00000513263 TEX11Q8IYF3 940 aa13.46□□□□□ -0.25
SKP2-207ENST00000513263 ZNF280CQ8ND82 737 aa13.46□□□□□ -0.25
SKP2-207ENST00000513263 RNF208Q9H0X6 261 aa13.46□□□□□ -0.25
SKP2-207ENST00000513263 PI4KBQ9UBF8 816 aa13.46□□□□□ -0.25
SKP2-207ENST00000513263 CCL5P13501 91 aa13.45□□□□□ -0.26
SKP2-207ENST00000513263 MCAMP43121 646 aa13.45□□□□□ -0.26
SKP2-207ENST00000513263 GTF3C2Q8WUA4 911 aaPredicted RBP13.45□□□□□ -0.26
SKP2-207ENST00000513263 ZNF512BQ96KM6 892 aaPredicted RBP13.45□□□□□ -0.26
SKP2-207ENST00000513263 NR2E3Q9Y5X4 410 aa13.45□□□□□ -0.26
SKP2-207ENST00000513263 LAMA3Q16787 3333 aa13.44□□□□□ -0.26
SKP2-207ENST00000513263 USP17L5A8MUK1 530 aa13.44□□□□□ -0.26
SKP2-207ENST00000513263 ADCY3O60266 1144 aa13.44□□□□□ -0.26
SKP2-207ENST00000513263 MYCP01106 439 aaPredicted RBP13.44□□□□□ -0.26
SKP2-207ENST00000513263 HLA-DOAP06340 250 aa13.44□□□□□ -0.26
SKP2-207ENST00000513263 CTGFP29279 349 aa13.44□□□□□ -0.26
SKP2-207ENST00000513263 SSH3Q8TE77 659 aa13.44□□□□□ -0.26
SKP2-207ENST00000513263 MYH7P12883 1935 aa13.44□□□□□ -0.26
SKP2-207ENST00000513263 DDX60LQ5H9U9 1706 aaKnown RBP13.44□□□□□ -0.26
SKP2-207ENST00000513263 PNMA6EA0A0J9YXQ4 647 aa13.43□□□□□ -0.26
SKP2-207ENST00000513263 FARP2O94887 1054 aaPredicted RBP13.43□□□□□ -0.26
SKP2-207ENST00000513263 CAP2P40123 477 aa13.43□□□□□ -0.26
SKP2-207ENST00000513263 FLT3LGP49771 235 aa13.43□□□□□ -0.26
SKP2-207ENST00000513263 PPP4CP60510 307 aa13.43□□□□□ -0.26
SKP2-207ENST00000513263 MTFR1Q15390 333 aa13.43□□□□□ -0.26
SKP2-207ENST00000513263 TNNI3KQ59H18 835 aa13.43□□□□□ -0.26
SKP2-207ENST00000513263 CRACR2BQ8N4Y2 399 aaPredicted RBP13.43□□□□□ -0.26
SKP2-207ENST00000513263 U2AF1L4Q8WU68 220 aaKnown RBP13.43□□□□□ -0.26
SKP2-207ENST00000513263 SHISA4Q96DD7 197 aa13.43□□□□□ -0.26
SKP2-207ENST00000513263 TMOD4Q9NZQ9 345 aa13.43□□□□□ -0.26
SKP2-207ENST00000513263 FPGT-TNNI3KV9GXZ4 949 aa13.43□□□□□ -0.26
SKP2-207ENST00000513263 FLT1P17948 1338 aa13.42□□□□□ -0.26
SKP2-207ENST00000513263 PLXNB2O15031 1838 aa13.42□□□□□ -0.26
SKP2-207ENST00000513263 C19orf81C9J6K1 198 aa13.42□□□□□ -0.26
SKP2-207ENST00000513263 INHAP05111 366 aa13.42□□□□□ -0.26
SKP2-207ENST00000513263 IRX3P78415 501 aaPredicted RBP13.42□□□□□ -0.26
SKP2-207ENST00000513263 SPP2Q13103 211 aa13.42□□□□□ -0.26
SKP2-207ENST00000513263 POLA2Q14181 598 aa13.42□□□□□ -0.26
SKP2-207ENST00000513263 SH3D19Q5HYK7 790 aa13.42□□□□□ -0.26
SKP2-207ENST00000513263 PI16Q6UXB8 463 aa13.42□□□□□ -0.26
SKP2-207ENST00000513263 ERC1Q8IUD2 1116 aa13.42□□□□□ -0.26
SKP2-207ENST00000513263 TMEM57Q8N5G2 664 aa13.42□□□□□ -0.26
SKP2-207ENST00000513263 ANKRD13CQ8N6S4 541 aa13.42□□□□□ -0.26
SKP2-207ENST00000513263 ANKLE1Q8NAG6 615 aa13.42□□□□□ -0.26
SKP2-207ENST00000513263 ZNF384Q8TF68 577 aa13.42□□□□□ -0.26
SKP2-207ENST00000513263 DPF3Q92784 378 aa13.42□□□□□ -0.26
SKP2-207ENST00000513263 CLUAP1Q96AJ1 413 aa13.42□□□□□ -0.26
SKP2-207ENST00000513263 WDR18Q9BV38 432 aa13.42□□□□□ -0.26
SKP2-207ENST00000513263 AATFQ9NY61 560 aaKnown RBP eCLIP13.42□□□□□ -0.26
SKP2-207ENST00000513263 ALPK3Q96L96 1907 aa13.42□□□□□ -0.26
SKP2-207ENST00000513263 FRMPD3Q5JV73 1810 aa13.41□□□□□ -0.26
SKP2-207ENST00000513263 SURF6O75683 361 aaKnown RBP13.41□□□□□ -0.26
SKP2-207ENST00000513263 BCAR3O75815 825 aa13.41□□□□□ -0.26
SKP2-207ENST00000513263 SGPL1O95470 568 aa13.41□□□□□ -0.26
SKP2-207ENST00000513263 HMGCRP04035 888 aa13.41□□□□□ -0.26
SKP2-207ENST00000513263 HMGCS2P54868 508 aa13.41□□□□□ -0.26
SKP2-207ENST00000513263 TBC1D9Q6ZT07 1266 aa13.41□□□□□ -0.26
SKP2-207ENST00000513263 UBE2Q1Q7Z7E8 422 aa13.41□□□□□ -0.26
SKP2-207ENST00000513263 FOXP4Q8IVH2 680 aaPredicted RBP13.41□□□□□ -0.26
SKP2-207ENST00000513263 SOCS4Q8WXH5 440 aa13.41□□□□□ -0.26
SKP2-207ENST00000513263 A0A1W2PPC1 479 aa13.4□□□□□ -0.26
SKP2-207ENST00000513263 ECM2O94769 699 aaPredicted RBP13.4□□□□□ -0.26
SKP2-207ENST00000513263 MS4A1P11836 297 aa13.4□□□□□ -0.26
SKP2-207ENST00000513263 BACE1P56817 501 aa13.4□□□□□ -0.26
SKP2-207ENST00000513263 ATP8B2P98198 1209 aa13.4□□□□□ -0.26
SKP2-207ENST00000513263 HSP90AB4PQ58FF6 505 aa13.4□□□□□ -0.26
SKP2-207ENST00000513263 TREML2Q5T2D2 321 aa13.4□□□□□ -0.26
SKP2-207ENST00000513263 METTL16Q86W50 562 aaKnown RBP13.4□□□□□ -0.26
SKP2-207ENST00000513263 ITPRIPQ8IWB1 547 aa13.4□□□□□ -0.26
SKP2-207ENST00000513263 TRMT44Q8IYL2 757 aaKnown RBP13.4□□□□□ -0.26
SKP2-207ENST00000513263 SH3RF3Q8TEJ3 882 aaPredicted RBP13.4□□□□□ -0.26
SKP2-207ENST00000513263 PAK6Q9NQU5 681 aaPredicted RBP13.4□□□□□ -0.26
SKP2-207ENST00000513263 GABRQQ9UN88 632 aa13.4□□□□□ -0.26
SKP2-207ENST00000513263 NOP58Q9Y2X3 529 aaKnown RBP13.4□□□□□ -0.26
SKP2-207ENST00000513263 USP17L10C9JJH3 530 aa13.39□□□□□ -0.27
SKP2-207ENST00000513263 H0YGN5 161 aa13.39□□□□□ -0.27
SKP2-207ENST00000513263 HOXA7P31268 230 aaPredicted RBP13.39□□□□□ -0.27
SKP2-207ENST00000513263 FXR1P51114 621 aaKnown RBP eCLIP13.39□□□□□ -0.27
SKP2-207ENST00000513263 MAP3K12Q12852 859 aa13.39□□□□□ -0.27
SKP2-207ENST00000513263 PDE3AQ14432 1141 aa13.39□□□□□ -0.27
SKP2-207ENST00000513263 UNC93B1Q9H1C4 597 aa13.39□□□□□ -0.27
SKP2-207ENST00000513263 ASCC2Q9H1I8 757 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms