RNA–Protein interactions for RNA: ENST00000512853.5

SNX25-205, Transcript of sorting nexin 25, humanhuman

TSL 1 (best)

Gene SNX25, Length 1,937 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-205ENST00000512853 STRBPQ96SI9 672 aaKnown RBP13.25□□□□□ -0.29
SNX25-205ENST00000512853 SLC26A6Q9BXS9 759 aa13.25□□□□□ -0.29
SNX25-205ENST00000512853 NFE2L3Q9Y4A8 694 aa13.25□□□□□ -0.29
SNX25-205ENST00000512853 PLCH1Q4KWH8 1693 aa13.24□□□□□ -0.29
SNX25-205ENST00000512853 COL5A2P05997 1499 aaPredicted RBP13.24□□□□□ -0.29
SNX25-205ENST00000512853 TBC1D8O95759 1140 aa13.24□□□□□ -0.29
SNX25-205ENST00000512853 UQCRFS1P1P0C7P4 283 aa13.24□□□□□ -0.29
SNX25-205ENST00000512853 GNG11P61952 73 aa13.24□□□□□ -0.29
SNX25-205ENST00000512853 CT47A1Q5JQC4 288 aaPredicted RBP13.24□□□□□ -0.29
SNX25-205ENST00000512853 CC2D1AQ6P1N0 951 aaPredicted RBP13.24□□□□□ -0.29
SNX25-205ENST00000512853 KIF6Q6ZMV9 814 aa13.24□□□□□ -0.29
SNX25-205ENST00000512853 TOGARAM2Q6ZUX3 1019 aa13.24□□□□□ -0.29
SNX25-205ENST00000512853 NUTM2AQ8IVF1 878 aaPredicted RBP13.24□□□□□ -0.29
SNX25-205ENST00000512853 TTLL11Q8NHH1 800 aa13.24□□□□□ -0.29
SNX25-205ENST00000512853 RABGGTAQ92696 567 aa13.24□□□□□ -0.29
SNX25-205ENST00000512853 SMARCE1Q969G3 411 aa13.24□□□□□ -0.29
SNX25-205ENST00000512853 FOXP1Q9H334 677 aaPredicted RBP13.24□□□□□ -0.29
SNX25-205ENST00000512853 EPB41L4AQ9HCS5 686 aaPredicted RBP13.24□□□□□ -0.29
SNX25-205ENST00000512853 RAI14Q9P0K7 980 aa13.24□□□□□ -0.29
SNX25-205ENST00000512853 TBC1D2BQ9UPU7 963 aa13.24□□□□□ -0.29
SNX25-205ENST00000512853 NHSL1Q5SYE7 1610 aa13.24□□□□□ -0.29
SNX25-205ENST00000512853 ACTN4O43707 911 aaKnown RBP13.23□□□□□ -0.29
SNX25-205ENST00000512853 PLCD1P51178 756 aa13.23□□□□□ -0.29
SNX25-205ENST00000512853 SAFBQ15424 915 aaKnown RBP eCLIP13.23□□□□□ -0.29
SNX25-205ENST00000512853 RILPL1Q5EBL4 403 aa13.23□□□□□ -0.29
SNX25-205ENST00000512853 DIS3L2Q8IYB7 885 aaKnown RBP13.23□□□□□ -0.29
SNX25-205ENST00000512853 SPATA20Q8TB22 786 aa13.23□□□□□ -0.29
SNX25-205ENST00000512853 CCDC85AQ96PX6 553 aaPredicted RBP13.23□□□□□ -0.29
SNX25-205ENST00000512853 MYL10Q9BUA6 226 aa13.23□□□□□ -0.29
SNX25-205ENST00000512853 CNNM2Q9H8M5 875 aa13.23□□□□□ -0.29
SNX25-205ENST00000512853 SERTAD1Q9UHV2 236 aa13.23□□□□□ -0.29
SNX25-205ENST00000512853 WWC3Q9ULE0 1092 aa13.23□□□□□ -0.29
SNX25-205ENST00000512853 SLC12A7Q9Y666 1083 aa13.23□□□□□ -0.29
SNX25-205ENST00000512853 MYH6P13533 1939 aa13.23□□□□□ -0.29
SNX25-205ENST00000512853 ABCA3Q99758 1704 aa13.23□□□□□ -0.29
SNX25-205ENST00000512853 A0A1B0GTH6 734 aa13.23□□□□□ -0.29
SNX25-205ENST00000512853 IDH1O75874 414 aaKnown RBP13.23□□□□□ -0.29
SNX25-205ENST00000512853 SEC31AO94979 1220 aaKnown RBP13.23□□□□□ -0.29
SNX25-205ENST00000512853 APPP05067 770 aa13.23□□□□□ -0.29
SNX25-205ENST00000512853 ITGA6P23229 1130 aa13.23□□□□□ -0.29
SNX25-205ENST00000512853 ERCC5P28715 1186 aaPredicted RBP13.23□□□□□ -0.29
SNX25-205ENST00000512853 RCAN1P53805 252 aa13.23□□□□□ -0.29
SNX25-205ENST00000512853 CTSWP56202 376 aa13.23□□□□□ -0.29
SNX25-205ENST00000512853 PTPN21Q16825 1174 aa13.23□□□□□ -0.29
SNX25-205ENST00000512853 KANK3Q6NY19 840 aa13.23□□□□□ -0.29
SNX25-205ENST00000512853 LDHAL6AQ6ZMR3 332 aa13.23□□□□□ -0.29
SNX25-205ENST00000512853 PANX2Q96RD6 677 aa13.23□□□□□ -0.29
SNX25-205ENST00000512853 MED15Q96RN5 788 aa13.23□□□□□ -0.29
SNX25-205ENST00000512853 MTA3Q9BTC8 594 aa13.23□□□□□ -0.29
SNX25-205ENST00000512853 BCL9LQ86UU0 1499 aa13.23□□□□□ -0.29
SNX25-205ENST00000512853 ANKRD18BA2A2Z9 1011 aa13.22□□□□□ -0.29
SNX25-205ENST00000512853 BTBD18B2RXH4 712 aa13.22□□□□□ -0.29
SNX25-205ENST00000512853 UBE2Q2LH0YL09 131 aa13.22□□□□□ -0.29
SNX25-205ENST00000512853 IFIT3O14879 490 aaKnown RBP13.22□□□□□ -0.29
SNX25-205ENST00000512853 SASH3O75995 380 aa13.22□□□□□ -0.29
SNX25-205ENST00000512853 GRIN1Q05586 938 aa13.22□□□□□ -0.29
SNX25-205ENST00000512853 NR1I3Q14994 352 aa13.22□□□□□ -0.29
SNX25-205ENST00000512853 TEX35Q5T0J7 233 aa13.22□□□□□ -0.29
SNX25-205ENST00000512853 JAKMIP3Q5VZ66 844 aa13.22□□□□□ -0.29
SNX25-205ENST00000512853 GIGYF2Q6Y7W6 1299 aaKnown RBP13.22□□□□□ -0.29
SNX25-205ENST00000512853 GREM2Q9H772 168 aa13.22□□□□□ -0.29
SNX25-205ENST00000512853 SRPRBQ9Y5M8 271 aaKnown RBP13.22□□□□□ -0.29
SNX25-205ENST00000512853 TACC3Q9Y6A5 838 aa13.22□□□□□ -0.29
SNX25-205ENST00000512853 ERICH4A6NGS2 130 aa13.21□□□□□ -0.29
SNX25-205ENST00000512853 PATL2C9JE40 543 aaKnown RBP13.21□□□□□ -0.29
SNX25-205ENST00000512853 PHKA1P46020 1223 aa13.21□□□□□ -0.29
SNX25-205ENST00000512853 RTN1Q16799 776 aa13.21□□□□□ -0.29
SNX25-205ENST00000512853 APTXQ7Z2E3 356 aaKnown RBP13.21□□□□□ -0.29
SNX25-205ENST00000512853 NLRP10Q86W26 655 aa13.21□□□□□ -0.29
SNX25-205ENST00000512853 TRMT44Q8IYL2 757 aaKnown RBP13.21□□□□□ -0.29
SNX25-205ENST00000512853 PDILTQ8N807 584 aa13.21□□□□□ -0.29
SNX25-205ENST00000512853 GOLGA1Q92805 767 aa13.21□□□□□ -0.29
SNX25-205ENST00000512853 AIDAQ96BJ3 306 aa13.21□□□□□ -0.29
SNX25-205ENST00000512853 KRT23Q9C075 422 aa13.21□□□□□ -0.29
SNX25-205ENST00000512853 CNNM1Q9NRU3 951 aa13.21□□□□□ -0.29
SNX25-205ENST00000512853 POLR2DO15514 142 aaKnown RBP13.21□□□□□ -0.3
SNX25-205ENST00000512853 PDE8BO95263 885 aa13.21□□□□□ -0.3
SNX25-205ENST00000512853 GUCY1A2P33402 732 aa13.21□□□□□ -0.3
SNX25-205ENST00000512853 PBX1P40424 430 aa13.21□□□□□ -0.3
SNX25-205ENST00000512853 ADKP55263 362 aaKnown RBP13.21□□□□□ -0.3
SNX25-205ENST00000512853 SPECC1Q5M775 1068 aa13.21□□□□□ -0.3
SNX25-205ENST00000512853 AKNAD1Q5T1N1 836 aa13.21□□□□□ -0.3
SNX25-205ENST00000512853 TRIM22Q8IYM9 498 aa13.21□□□□□ -0.3
SNX25-205ENST00000512853 IFNL3Q8IZI9 196 aa13.21□□□□□ -0.3
SNX25-205ENST00000512853 STAG1Q8WVM7 1258 aa13.21□□□□□ -0.3
SNX25-205ENST00000512853 DHX58Q96C10 678 aa13.21□□□□□ -0.3
SNX25-205ENST00000512853 NAA15Q9BXJ9 866 aaKnown RBP13.21□□□□□ -0.3
SNX25-205ENST00000512853 TEX13AQ9BXU3 409 aaPredicted RBP13.21□□□□□ -0.3
SNX25-205ENST00000512853 MRPL44Q9H9J2 332 aaKnown RBP13.21□□□□□ -0.3
SNX25-205ENST00000512853 ZSWIM5Q9P217 1185 aa13.21□□□□□ -0.3
SNX25-205ENST00000512853 CEP131Q9UPN4 1083 aa13.21□□□□□ -0.3
SNX25-205ENST00000512853 NUP98P52948 1817 aa13.2□□□□□ -0.3
SNX25-205ENST00000512853 AKR1B15C9JRZ8 316 aaPredicted RBP13.2□□□□□ -0.3
SNX25-205ENST00000512853 DEXIO95424 95 aa13.2□□□□□ -0.3
SNX25-205ENST00000512853 CDK11BP21127 795 aaKnown RBP13.2□□□□□ -0.3
SNX25-205ENST00000512853 FGFR2P21802 821 aa13.2□□□□□ -0.3
SNX25-205ENST00000512853 ZNF827Q17R98 1081 aa13.2□□□□□ -0.3
SNX25-205ENST00000512853 FAM177A1Q8N128 213 aaPredicted RBP13.2□□□□□ -0.3
SNX25-205ENST00000512853 NAPBQ9H115 298 aa13.2□□□□□ -0.3
SNX25-205ENST00000512853 KCNJ14Q9UNX9 436 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms