RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 SLC35F4A4IF30 521 aa7.59□□□□□ -1.19
CHD1-208ENST00000512392 ORC4O43929 436 aa7.59□□□□□ -1.19
CHD1-208ENST00000512392 PPP1R12BO60237 982 aaPredicted RBP7.59□□□□□ -1.19
CHD1-208ENST00000512392 SNX2O60749 519 aa7.59□□□□□ -1.19
CHD1-208ENST00000512392 PHKA2P46019 1235 aa7.59□□□□□ -1.19
CHD1-208ENST00000512392 RENBPP51606 427 aa7.59□□□□□ -1.19
CHD1-208ENST00000512392 DNM1Q05193 864 aaKnown RBP7.59□□□□□ -1.19
CHD1-208ENST00000512392 PUM3Q15397 648 aaKnown RBP7.59□□□□□ -1.19
CHD1-208ENST00000512392 TBC1D10BQ4KMP7 808 aaPredicted RBP7.59□□□□□ -1.19
CHD1-208ENST00000512392 TBCELQ5QJ74 424 aa7.59□□□□□ -1.19
CHD1-208ENST00000512392 PERM1Q5SV97 790 aa7.59□□□□□ -1.19
CHD1-208ENST00000512392 DUSP27Q5VZP5 1158 aa7.59□□□□□ -1.19
CHD1-208ENST00000512392 MMS22LQ6ZRQ5 1243 aa7.59□□□□□ -1.19
CHD1-208ENST00000512392 CHCHD4Q8N4Q1 142 aa7.59□□□□□ -1.19
CHD1-208ENST00000512392 ZNF296Q8WUU4 475 aaPredicted RBP7.59□□□□□ -1.19
CHD1-208ENST00000512392 ATXN2LQ8WWM7 1075 aaKnown RBP7.59□□□□□ -1.19
CHD1-208ENST00000512392 MTMR8Q96EF0 704 aa7.59□□□□□ -1.19
CHD1-208ENST00000512392 RHOBTB2Q9BYZ6 727 aa7.59□□□□□ -1.19
CHD1-208ENST00000512392 TRIM8Q9BZR9 551 aa7.59□□□□□ -1.19
CHD1-208ENST00000512392 ATG3Q9NT62 314 aa7.59□□□□□ -1.19
CHD1-208ENST00000512392 CHMP3Q9Y3E7 222 aa7.59□□□□□ -1.19
CHD1-208ENST00000512392 DYRK1BQ9Y463 629 aa7.59□□□□□ -1.19
CHD1-208ENST00000512392 SERTM1A2A2V5 107 aa7.59□□□□□ -1.2
CHD1-208ENST00000512392 USP17L7P0C7H9 530 aa7.59□□□□□ -1.2
CHD1-208ENST00000512392 ITKQ08881 620 aa7.59□□□□□ -1.2
CHD1-208ENST00000512392 SPECC1Q5M775 1068 aa7.59□□□□□ -1.2
CHD1-208ENST00000512392 POTEAQ6S8J7 498 aa7.59□□□□□ -1.2
CHD1-208ENST00000512392 ZDHHC1Q8WTX9 485 aa7.59□□□□□ -1.2
CHD1-208ENST00000512392 SNRNP27Q8WVK2 155 aaKnown RBP7.59□□□□□ -1.2
CHD1-208ENST00000512392 TTC14Q96N46 770 aa7.59□□□□□ -1.2
CHD1-208ENST00000512392 SCLT1Q96NL6 688 aa7.59□□□□□ -1.2
CHD1-208ENST00000512392 TRIM56Q9BRZ2 755 aaKnown RBP7.59□□□□□ -1.2
CHD1-208ENST00000512392 PCDHGB3Q9Y5G1 929 aa7.59□□□□□ -1.2
CHD1-208ENST00000512392 SENP3-EIF4A1A0A087X0R7 540 aa7.58□□□□□ -1.2
CHD1-208ENST00000512392 EIF4A3P38919 411 aaKnown RBP7.58□□□□□ -1.2
CHD1-208ENST00000512392 PLA2G4AP47712 749 aa7.58□□□□□ -1.2
CHD1-208ENST00000512392 TPH2Q8IWU9 490 aa7.58□□□□□ -1.2
CHD1-208ENST00000512392 L3MBTL2Q969R5 705 aa7.58□□□□□ -1.2
CHD1-208ENST00000512392 EIF2AK1Q9BQI3 630 aaKnown RBP7.58□□□□□ -1.2
CHD1-208ENST00000512392 PLCB1Q9NQ66 1216 aa7.58□□□□□ -1.2
CHD1-208ENST00000512392 FAM13BQ9NYF5 915 aa7.58□□□□□ -1.2
CHD1-208ENST00000512392 PPT2Q9UMR5 302 aa7.58□□□□□ -1.2
CHD1-208ENST00000512392 A0A1B0GTH6 734 aa7.57□□□□□ -1.2
CHD1-208ENST00000512392 LMNB1P20700 586 aa7.57□□□□□ -1.2
CHD1-208ENST00000512392 SOX5P35711 763 aa7.57□□□□□ -1.2
CHD1-208ENST00000512392 HIRAP54198 1017 aaPredicted RBP7.57□□□□□ -1.2
CHD1-208ENST00000512392 CHAF1AQ13111 956 aaPredicted RBP7.57□□□□□ -1.2
CHD1-208ENST00000512392 PCNX4Q63HM2 1172 aa7.57□□□□□ -1.2
CHD1-208ENST00000512392 FBXL19Q6PCT2 694 aa7.57□□□□□ -1.2
CHD1-208ENST00000512392 MAATS1Q7Z4T9 603 aa7.57□□□□□ -1.2
CHD1-208ENST00000512392 RASSF3Q86WH2 238 aa7.57□□□□□ -1.2
CHD1-208ENST00000512392 PARD3BQ8TEW8 1205 aa7.57□□□□□ -1.2
CHD1-208ENST00000512392 PGBD4Q96DM1 585 aa7.57□□□□□ -1.2
CHD1-208ENST00000512392 TMEM87BQ96K49 555 aa7.57□□□□□ -1.2
CHD1-208ENST00000512392 RIC8AQ9NPQ8 531 aa7.57□□□□□ -1.2
CHD1-208ENST00000512392 UBP1Q9NZI7 540 aa7.57□□□□□ -1.2
CHD1-208ENST00000512392 FEZ2Q9UHY8 353 aaPredicted RBP7.57□□□□□ -1.2
CHD1-208ENST00000512392 GSG1L2A8MUP6 293 aa7.57□□□□□ -1.2
CHD1-208ENST00000512392 EML1O00423 815 aa7.57□□□□□ -1.2
CHD1-208ENST00000512392 RPN1P04843 607 aaKnown RBP7.57□□□□□ -1.2
CHD1-208ENST00000512392 ZSCAN20P17040 1043 aaPredicted RBP7.57□□□□□ -1.2
CHD1-208ENST00000512392 DGKGP49619 791 aa7.57□□□□□ -1.2
CHD1-208ENST00000512392 CNGB1Q14028 1251 aaPredicted RBP7.57□□□□□ -1.2
CHD1-208ENST00000512392 TAF11Q15544 211 aa7.57□□□□□ -1.2
CHD1-208ENST00000512392 LARP1BQ659C4 914 aaKnown RBP7.57□□□□□ -1.2
CHD1-208ENST00000512392 HSCBQ8IWL3 235 aa7.57□□□□□ -1.2
CHD1-208ENST00000512392 IFNL2Q8IZJ0 200 aa7.57□□□□□ -1.2
CHD1-208ENST00000512392 CCDC155Q8N6L0 562 aa7.57□□□□□ -1.2
CHD1-208ENST00000512392 USP33Q8TEY7 942 aa7.57□□□□□ -1.2
CHD1-208ENST00000512392 ELAC2Q9BQ52 826 aaKnown RBP7.57□□□□□ -1.2
CHD1-208ENST00000512392 SRRTQ9BXP5 876 aaKnown RBP7.57□□□□□ -1.2
CHD1-208ENST00000512392 TNKS2Q9H2K2 1166 aa7.57□□□□□ -1.2
CHD1-208ENST00000512392 ZDHHC3Q9NYG2 299 aa7.57□□□□□ -1.2
CHD1-208ENST00000512392 ZNF232Q9UNY5 417 aa7.57□□□□□ -1.2
CHD1-208ENST00000512392 FAM50BQ9Y247 325 aa7.57□□□□□ -1.2
CHD1-208ENST00000512392 PHLDB1Q86UU1 1377 aa7.56□□□□□ -1.2
CHD1-208ENST00000512392 F11P03951 625 aa7.56□□□□□ -1.2
CHD1-208ENST00000512392 CLK1P49759 484 aaKnown RBP7.56□□□□□ -1.2
CHD1-208ENST00000512392 NUCB1Q02818 461 aa7.56□□□□□ -1.2
CHD1-208ENST00000512392 C8orf34Q49A92 452 aa7.56□□□□□ -1.2
CHD1-208ENST00000512392 COBLL1Q53SF7 1204 aa7.56□□□□□ -1.2
CHD1-208ENST00000512392 JAKMIP3Q5VZ66 844 aa7.56□□□□□ -1.2
CHD1-208ENST00000512392 PASD1Q8IV76 773 aa7.56□□□□□ -1.2
CHD1-208ENST00000512392 SYNPOQ8N3V7 929 aa7.56□□□□□ -1.2
CHD1-208ENST00000512392 PARP3Q9Y6F1 533 aa7.56□□□□□ -1.2
CHD1-208ENST00000512392 A6NHS1 94 aa7.55□□□□□ -1.2
CHD1-208ENST00000512392 TDO2P48775 406 aa7.55□□□□□ -1.2
CHD1-208ENST00000512392 GTF2A2P52657 109 aa7.55□□□□□ -1.2
CHD1-208ENST00000512392 OTUD6BQ8N6M0 293 aa7.55□□□□□ -1.2
CHD1-208ENST00000512392 EDEM1Q92611 657 aa7.55□□□□□ -1.2
CHD1-208ENST00000512392 AIDAQ96BJ3 306 aa7.55□□□□□ -1.2
CHD1-208ENST00000512392 CD248Q9HCU0 757 aa7.55□□□□□ -1.2
CHD1-208ENST00000512392 PPFIA3O75145 1194 aa7.55□□□□□ -1.2
CHD1-208ENST00000512392 ABLIM3O94929 683 aa7.55□□□□□ -1.2
CHD1-208ENST00000512392 PDGFAP04085 211 aa7.55□□□□□ -1.2
CHD1-208ENST00000512392 TYRP1P17643 537 aa7.55□□□□□ -1.2
CHD1-208ENST00000512392 MSX1P28360 303 aa7.55□□□□□ -1.2
CHD1-208ENST00000512392 ADD2P35612 726 aa7.55□□□□□ -1.2
CHD1-208ENST00000512392 PABPC4Q13310 644 aaKnown RBP eCLIP7.55□□□□□ -1.2
CHD1-208ENST00000512392 LMBRD2Q68DH5 695 aaPredicted RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms