RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 BSDC1Q9NW68 430 aaPredicted RBP14.88□□□□□ -0.03
PCDHA4-202ENST00000512229 NARFQ9UHQ1 456 aa14.88□□□□□ -0.03
PCDHA4-202ENST00000512229 MCAMP43121 646 aa14.88□□□□□ -0.03
PCDHA4-202ENST00000512229 STX17P56962 302 aa14.88□□□□□ -0.03
PCDHA4-202ENST00000512229 TDRD12Q587J7 1177 aaKnown RBP14.88□□□□□ -0.03
PCDHA4-202ENST00000512229 MED23Q9ULK4 1368 aa14.87□□□□□ -0.03
PCDHA4-202ENST00000512229 ZMYM6O95789 1325 aa14.87□□□□□ -0.03
PCDHA4-202ENST00000512229 POLR2DO15514 142 aaKnown RBP14.87□□□□□ -0.03
PCDHA4-202ENST00000512229 CLCN1P35523 988 aa14.87□□□□□ -0.03
PCDHA4-202ENST00000512229 CMTR1Q8N1G2 835 aaKnown RBP14.87□□□□□ -0.03
PCDHA4-202ENST00000512229 SLC1A4P43007 532 aa14.87□□□□□ -0.03
PCDHA4-202ENST00000512229 FOXO4P98177 505 aa14.87□□□□□ -0.03
PCDHA4-202ENST00000512229 ENOX2Q16206 610 aaKnown RBP14.87□□□□□ -0.03
PCDHA4-202ENST00000512229 APOA5Q6Q788 366 aa14.87□□□□□ -0.03
PCDHA4-202ENST00000512229 ZNF771Q7L3S4 317 aaPredicted RBP14.87□□□□□ -0.03
PCDHA4-202ENST00000512229 VPS36Q86VN1 386 aa14.87□□□□□ -0.03
PCDHA4-202ENST00000512229 RICTORQ6R327 1708 aa14.87□□□□□ -0.03
PCDHA4-202ENST00000512229 MYL5Q02045 173 aa14.87□□□□□ -0.03
PCDHA4-202ENST00000512229 NOLC1Q14978 699 aaKnown RBP eCLIP14.87□□□□□ -0.03
PCDHA4-202ENST00000512229 ADALQ6DHV7 355 aa14.87□□□□□ -0.03
PCDHA4-202ENST00000512229 PLIN2Q99541 437 aa14.87□□□□□ -0.03
PCDHA4-202ENST00000512229 ARHGEF28Q8N1W1 1705 aaKnown RBP14.86□□□□□ -0.03
PCDHA4-202ENST00000512229 PPIP5K2O43314 1243 aa14.86□□□□□ -0.03
PCDHA4-202ENST00000512229 TRIM21P19474 475 aaKnown RBP14.86□□□□□ -0.03
PCDHA4-202ENST00000512229 ARID4AP29374 1257 aaPredicted RBP14.86□□□□□ -0.03
PCDHA4-202ENST00000512229 SPECC1Q5M775 1068 aa14.86□□□□□ -0.03
PCDHA4-202ENST00000512229 PNMA1Q8ND90 353 aa14.86□□□□□ -0.03
PCDHA4-202ENST00000512229 PIH1D3Q9NQM4 214 aaKnown RBP14.86□□□□□ -0.03
PCDHA4-202ENST00000512229 IFNKQ9P0W0 207 aa14.86□□□□□ -0.03
PCDHA4-202ENST00000512229 DOK7Q18PE1 504 aa14.86□□□□□ -0.03
PCDHA4-202ENST00000512229 GOLGA6L9A6NEM1 432 aa14.86□□□□□ -0.03
PCDHA4-202ENST00000512229 ZNF772Q68DY9 489 aaPredicted RBP14.86□□□□□ -0.03
PCDHA4-202ENST00000512229 C2CD5Q86YS7 1000 aa14.86□□□□□ -0.03
PCDHA4-202ENST00000512229 SH2D4AQ9H788 454 aa14.86□□□□□ -0.03
PCDHA4-202ENST00000512229 OVOS2A0A0G2JMS6 1433 aa14.86□□□□□ -0.03
PCDHA4-202ENST00000512229 PRKAB2O43741 272 aa14.85□□□□□ -0.03
PCDHA4-202ENST00000512229 SNW1Q13573 536 aaKnown RBP14.85□□□□□ -0.03
PCDHA4-202ENST00000512229 CNKSR1Q969H4 720 aa14.85□□□□□ -0.03
PCDHA4-202ENST00000512229 USO1O60763 962 aaKnown RBP14.85□□□□□ -0.03
PCDHA4-202ENST00000512229 LIG1P18858 919 aa14.85□□□□□ -0.03
PCDHA4-202ENST00000512229 BTDP43251 543 aa14.85□□□□□ -0.03
PCDHA4-202ENST00000512229 PLCD1P51178 756 aa14.85□□□□□ -0.03
PCDHA4-202ENST00000512229 CETN1Q12798 172 aa14.85□□□□□ -0.03
PCDHA4-202ENST00000512229 JAKMIP3Q5VZ66 844 aa14.85□□□□□ -0.03
PCDHA4-202ENST00000512229 PPP4R3AQ6IN85 833 aa14.85□□□□□ -0.03
PCDHA4-202ENST00000512229 KIAA0825Q8IV33 1275 aa14.85□□□□□ -0.03
PCDHA4-202ENST00000512229 NOSTRINQ8IVI9 506 aa14.85□□□□□ -0.03
PCDHA4-202ENST00000512229 SYCP3Q8IZU3 236 aa14.85□□□□□ -0.03
PCDHA4-202ENST00000512229 NSUN7Q8NE18 718 aaKnown RBP14.85□□□□□ -0.03
PCDHA4-202ENST00000512229 ERLIN1O75477 346 aa14.85□□□□□ -0.03
PCDHA4-202ENST00000512229 TMC4Q7Z404 712 aa14.85□□□□□ -0.03
PCDHA4-202ENST00000512229 MYO6Q9UM54 1294 aa14.85□□□□□ -0.03
PCDHA4-202ENST00000512229 BTBD18B2RXH4 712 aa14.85□□□□□ -0.03
PCDHA4-202ENST00000512229 DYNLL1P63167 89 aaKnown RBP14.85□□□□□ -0.03
PCDHA4-202ENST00000512229 PDIA6Q15084 440 aa14.85□□□□□ -0.03
PCDHA4-202ENST00000512229 LCORLQ8N3X6 602 aa14.85□□□□□ -0.03
PCDHA4-202ENST00000512229 RIMS1Q86UR5 1692 aaKnown RBP14.84□□□□□ -0.03
PCDHA4-202ENST00000512229 NONOQ15233 471 aaKnown RBP eCLIP14.84□□□□□ -0.03
PCDHA4-202ENST00000512229 SLFNL1Q499Z3 407 aa14.84□□□□□ -0.03
PCDHA4-202ENST00000512229 GTPBP4Q9BZE4 634 aaKnown RBP14.84□□□□□ -0.03
PCDHA4-202ENST00000512229 GLT8D2Q9H1C3 349 aa14.84□□□□□ -0.03
PCDHA4-202ENST00000512229 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.84□□□□□ -0.03
PCDHA4-202ENST00000512229 LARGE1O95461 756 aa14.84□□□□□ -0.03
PCDHA4-202ENST00000512229 DLGAP5Q15398 846 aa14.84□□□□□ -0.03
PCDHA4-202ENST00000512229 TAF4BQ92750 862 aa14.84□□□□□ -0.03
PCDHA4-202ENST00000512229 STRBPQ96SI9 672 aaKnown RBP14.84□□□□□ -0.03
PCDHA4-202ENST00000512229 ARHGEF10LQ9HCE6 1279 aa14.84□□□□□ -0.03
PCDHA4-202ENST00000512229 MAP2P11137 1827 aaKnown RBP14.84□□□□□ -0.03
PCDHA4-202ENST00000512229 AFF2P51816 1311 aa14.84□□□□□ -0.03
PCDHA4-202ENST00000512229 CYP2E1P05181 493 aaPredicted RBP14.84□□□□□ -0.03
PCDHA4-202ENST00000512229 IQCEQ6IPM2 695 aa14.84□□□□□ -0.03
PCDHA4-202ENST00000512229 KRT25Q7Z3Z0 450 aa14.84□□□□□ -0.03
PCDHA4-202ENST00000512229 FERMT2Q96AC1 680 aa14.84□□□□□ -0.03
PCDHA4-202ENST00000512229 COL15A1P39059 1388 aa14.84□□□□□ -0.03
PCDHA4-202ENST00000512229 COL3A1P02461 1466 aaPredicted RBP14.84□□□□□ -0.03
PCDHA4-202ENST00000512229 PTGS1P23219 599 aa14.83□□□□□ -0.03
PCDHA4-202ENST00000512229 CASQ1P31415 396 aa14.83□□□□□ -0.03
PCDHA4-202ENST00000512229 SCNN1DP51172 638 aa14.83□□□□□ -0.03
PCDHA4-202ENST00000512229 GPT2Q8TD30 523 aa14.83□□□□□ -0.03
PCDHA4-202ENST00000512229 NAP1L4Q99733 375 aaKnown RBP14.83□□□□□ -0.03
PCDHA4-202ENST00000512229 CBX8Q9HC52 389 aa14.83□□□□□ -0.03
PCDHA4-202ENST00000512229 WDHD1O75717 1129 aaPredicted RBP14.83□□□□□ -0.04
PCDHA4-202ENST00000512229 ZSWIM5Q9P217 1185 aa14.83□□□□□ -0.04
PCDHA4-202ENST00000512229 GJA3Q9Y6H8 435 aa14.83□□□□□ -0.04
PCDHA4-202ENST00000512229 RXRBP28702 533 aa14.83□□□□□ -0.04
PCDHA4-202ENST00000512229 CDR1P51861 262 aa14.83□□□□□ -0.04
PCDHA4-202ENST00000512229 GRAPQ13588 217 aa14.83□□□□□ -0.04
PCDHA4-202ENST00000512229 NKX1-1Q15270 411 aaPredicted RBP14.83□□□□□ -0.04
PCDHA4-202ENST00000512229 GRAPLQ8TC17 118 aaPredicted RBP14.83□□□□□ -0.04
PCDHA4-202ENST00000512229 GNG11P61952 73 aa14.82□□□□□ -0.04
PCDHA4-202ENST00000512229 NCOA3Q9Y6Q9 1424 aa14.82□□□□□ -0.04
PCDHA4-202ENST00000512229 AKR1B10O60218 316 aa14.82□□□□□ -0.04
PCDHA4-202ENST00000512229 CCNT1O60563 726 aaKnown RBP14.82□□□□□ -0.04
PCDHA4-202ENST00000512229 NR1I2O75469 434 aa14.82□□□□□ -0.04
PCDHA4-202ENST00000512229 ATG9AQ7Z3C6 839 aa14.82□□□□□ -0.04
PCDHA4-202ENST00000512229 FCHSD1Q86WN1 690 aa14.82□□□□□ -0.04
PCDHA4-202ENST00000512229 MINPP1Q9UNW1 487 aa14.82□□□□□ -0.04
PCDHA4-202ENST00000512229 TXKP42681 527 aa14.82□□□□□ -0.04
PCDHA4-202ENST00000512229 BICDL2A1A5D9 508 aa14.81□□□□□ -0.04
PCDHA4-202ENST00000512229 KLRF2D3W0D1 207 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms