RNA–Protein interactions for RNA: ENST00000512019.1

SMAD1-211, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 847 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-211ENST00000512019 PUS7LQ9H0K6 701 aaKnown RBP23.48■■□□□ 1.35
SMAD1-211ENST00000512019 USP40Q9NVE5 1235 aa23.48■■□□□ 1.35
SMAD1-211ENST00000512019 A0A0D9SFI3 127 aa23.47■■□□□ 1.35
SMAD1-211ENST00000512019 MCMDC2Q4G0Z9 681 aa23.47■■□□□ 1.35
SMAD1-211ENST00000512019 CDC42EP5Q6NZY7 148 aa23.47■■□□□ 1.35
SMAD1-211ENST00000512019 CWC27Q6UX04 472 aaKnown RBP23.47■■□□□ 1.35
SMAD1-211ENST00000512019 CNKSR2Q8WXI2 1034 aa23.47■■□□□ 1.35
SMAD1-211ENST00000512019 FAM227BQ96M60 508 aa23.47■■□□□ 1.35
SMAD1-211ENST00000512019 M0R2C6 588 aa23.46■■□□□ 1.35
SMAD1-211ENST00000512019 CACNB3P54284 484 aa23.46■■□□□ 1.35
SMAD1-211ENST00000512019 MFAP1P55081 439 aaKnown RBP23.46■■□□□ 1.35
SMAD1-211ENST00000512019 RHBDL3P58872 404 aa23.46■■□□□ 1.35
SMAD1-211ENST00000512019 DYNLL1P63167 89 aaKnown RBP23.46■■□□□ 1.35
SMAD1-211ENST00000512019 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.46■■□□□ 1.35
SMAD1-211ENST00000512019 TEX11Q8IYF3 940 aa23.46■■□□□ 1.35
SMAD1-211ENST00000512019 LCORLQ8N3X6 602 aa23.46■■□□□ 1.35
SMAD1-211ENST00000512019 RAD50Q92878 1312 aa23.46■■□□□ 1.35
SMAD1-211ENST00000512019 OPTNQ96CV9 577 aa23.46■■□□□ 1.35
SMAD1-211ENST00000512019 CRNKL1Q9BZJ0 848 aaKnown RBP23.46■■□□□ 1.35
SMAD1-211ENST00000512019 TRIM17Q9Y577 477 aa23.46■■□□□ 1.35
SMAD1-211ENST00000512019 GPAA1O43292 621 aa23.45■■□□□ 1.34
SMAD1-211ENST00000512019 CRHR2Q13324 411 aa23.45■■□□□ 1.34
SMAD1-211ENST00000512019 SH3RF3Q8TEJ3 882 aaPredicted RBP23.45■■□□□ 1.34
SMAD1-211ENST00000512019 ARMT1Q9H993 441 aa23.45■■□□□ 1.34
SMAD1-211ENST00000512019 TESPA1A2RU30 521 aaPredicted RBP23.44■■□□□ 1.34
SMAD1-211ENST00000512019 GNAT2P19087 354 aa23.44■■□□□ 1.34
SMAD1-211ENST00000512019 OTOP1Q7RTM1 612 aa23.44■■□□□ 1.34
SMAD1-211ENST00000512019 SEC62Q99442 399 aaKnown RBP23.44■■□□□ 1.34
SMAD1-211ENST00000512019 CCDC171Q6TFL3 1326 aa23.43■■□□□ 1.34
SMAD1-211ENST00000512019 TNNI2P48788 182 aa23.43■■□□□ 1.34
SMAD1-211ENST00000512019 CAP1Q01518 475 aa23.43■■□□□ 1.34
SMAD1-211ENST00000512019 FKBP1CQ5VVH2 108 aa23.43■■□□□ 1.34
SMAD1-211ENST00000512019 CD99L2Q8TCZ2 262 aa23.43■■□□□ 1.34
SMAD1-211ENST00000512019 IDI2Q9BXS1 227 aa23.43■■□□□ 1.34
SMAD1-211ENST00000512019 WDHD1O75717 1129 aaPredicted RBP23.42■■□□□ 1.34
SMAD1-211ENST00000512019 VGLL4Q14135 290 aa23.42■■□□□ 1.34
SMAD1-211ENST00000512019 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.42■■□□□ 1.34
SMAD1-211ENST00000512019 MS4A4AQ96JQ5 239 aa23.42■■□□□ 1.34
SMAD1-211ENST00000512019 STRBPQ96SI9 672 aaKnown RBP23.42■■□□□ 1.34
SMAD1-211ENST00000512019 ZSWIM8A7E2V4 1837 aa23.42■■□□□ 1.34
SMAD1-211ENST00000512019 HTTP42858 3142 aa23.42■■□□□ 1.34
SMAD1-211ENST00000512019 NPM3O75607 178 aaKnown RBP23.41■■□□□ 1.34
SMAD1-211ENST00000512019 USP5P45974 858 aa23.41■■□□□ 1.34
SMAD1-211ENST00000512019 MAP3K9P80192 1104 aa23.41■■□□□ 1.34
SMAD1-211ENST00000512019 OTUD7BQ6GQQ9 843 aa23.41■■□□□ 1.34
SMAD1-211ENST00000512019 CCDC129Q6ZRS4 1044 aa23.41■■□□□ 1.34
SMAD1-211ENST00000512019 DDRGK1Q96HY6 314 aa23.41■■□□□ 1.34
SMAD1-211ENST00000512019 SLC4A4Q9Y6R1 1079 aa23.41■■□□□ 1.34
SMAD1-211ENST00000512019 RBBP6Q7Z6E9 1792 aaKnown RBP23.41■■□□□ 1.34
SMAD1-211ENST00000512019 RPAP1Q9BWH6 1393 aaPredicted RBP23.4■■□□□ 1.34
SMAD1-211ENST00000512019 FOCADQ5VW36 1801 aa23.4■■□□□ 1.34
SMAD1-211ENST00000512019 PICALMQ13492 652 aa23.4■■□□□ 1.34
SMAD1-211ENST00000512019 ZNF589Q86UQ0 364 aaPredicted RBP23.4■■□□□ 1.34
SMAD1-211ENST00000512019 TGFBRAP1Q8WUH2 860 aa23.4■■□□□ 1.34
SMAD1-211ENST00000512019 BRI3BPQ8WY22 251 aa23.4■■□□□ 1.34
SMAD1-211ENST00000512019 ESYT1Q9BSJ8 1104 aa23.4■■□□□ 1.34
SMAD1-211ENST00000512019 FLT1P17948 1338 aa23.39■■□□□ 1.34
SMAD1-211ENST00000512019 CDK5RAP2Q96SN8 1893 aa23.39■■□□□ 1.34
SMAD1-211ENST00000512019 SGSM2O43147 1006 aa23.39■■□□□ 1.33
SMAD1-211ENST00000512019 ENTPD3O75355 529 aa23.39■■□□□ 1.33
SMAD1-211ENST00000512019 NFIAQ12857 509 aa23.39■■□□□ 1.33
SMAD1-211ENST00000512019 FAM83AQ86UY5 434 aa23.39■■□□□ 1.33
SMAD1-211ENST00000512019 ERO1AQ96HE7 468 aa23.39■■□□□ 1.33
SMAD1-211ENST00000512019 ATP8A2Q9NTI2 1148 aa23.39■■□□□ 1.33
SMAD1-211ENST00000512019 MAPKAPK5Q8IW41 473 aa23.38■■□□□ 1.33
SMAD1-211ENST00000512019 SDR42E1Q8WUS8 393 aa23.38■■□□□ 1.33
SMAD1-211ENST00000512019 OTUD5Q96G74 571 aa23.38■■□□□ 1.33
SMAD1-211ENST00000512019 NACAP1Q9BZK3 213 aa23.38■■□□□ 1.33
SMAD1-211ENST00000512019 PTPN22Q9Y2R2 807 aa23.38■■□□□ 1.33
SMAD1-211ENST00000512019 COL2A1P02458 1487 aaPredicted RBP23.37■■□□□ 1.33
SMAD1-211ENST00000512019 NAV1Q8NEY1 1877 aa23.37■■□□□ 1.33
SMAD1-211ENST00000512019 CCL15-CCL14A0A0B4J2E2 113 aa23.37■■□□□ 1.33
SMAD1-211ENST00000512019 PRKAB2O43741 272 aa23.37■■□□□ 1.33
SMAD1-211ENST00000512019 SP3Q02447 781 aa23.37■■□□□ 1.33
SMAD1-211ENST00000512019 TCP10Q12799 353 aa23.37■■□□□ 1.33
SMAD1-211ENST00000512019 CCL15Q16663 113 aa23.37■■□□□ 1.33
SMAD1-211ENST00000512019 GIMAP6Q6P9H5 292 aa23.37■■□□□ 1.33
SMAD1-211ENST00000512019 DDX4Q9NQI0 724 aaKnown RBP23.37■■□□□ 1.33
SMAD1-211ENST00000512019 FAM198AQ9UFP1 575 aa23.37■■□□□ 1.33
SMAD1-211ENST00000512019 CSADQ9Y600 493 aa23.37■■□□□ 1.33
SMAD1-211ENST00000512019 SNCAIPQ9Y6H5 919 aa23.37■■□□□ 1.33
SMAD1-211ENST00000512019 APPP05067 770 aa23.36■■□□□ 1.33
SMAD1-211ENST00000512019 FAM43AQ8N2R8 423 aa23.36■■□□□ 1.33
SMAD1-211ENST00000512019 FAM151AQ8WW52 585 aa23.36■■□□□ 1.33
SMAD1-211ENST00000512019 OSBPL5Q9H0X9 879 aaPredicted RBP23.36■■□□□ 1.33
SMAD1-211ENST00000512019 IL25Q9H293 177 aa23.36■■□□□ 1.33
SMAD1-211ENST00000512019 POTEFA5A3E0 1075 aa23.35■■□□□ 1.33
SMAD1-211ENST00000512019 PATL2C9JE40 543 aaKnown RBP23.35■■□□□ 1.33
SMAD1-211ENST00000512019 GTF2A2P52657 109 aa23.35■■□□□ 1.33
SMAD1-211ENST00000512019 PRPF38BQ5VTL8 546 aaKnown RBP23.35■■□□□ 1.33
SMAD1-211ENST00000512019 KIAA1211Q6ZU35 1233 aa23.35■■□□□ 1.33
SMAD1-211ENST00000512019 ZKSCAN4Q969J2 545 aaPredicted RBP23.35■■□□□ 1.33
SMAD1-211ENST00000512019 EFCC1Q9HA90 598 aa23.35■■□□□ 1.33
SMAD1-211ENST00000512019 DCP1AQ9NPI6 582 aaPredicted RBP23.35■■□□□ 1.33
SMAD1-211ENST00000512019 DDX60LQ5H9U9 1706 aaKnown RBP23.34■■□□□ 1.33
SMAD1-211ENST00000512019 SPDYE5A6NIY4 337 aa23.34■■□□□ 1.33
SMAD1-211ENST00000512019 GSG1L2A8MUP6 293 aa23.34■■□□□ 1.33
SMAD1-211ENST00000512019 EIF5BO60841 1220 aaKnown RBP23.34■■□□□ 1.33
SMAD1-211ENST00000512019 TDO2P48775 406 aa23.34■■□□□ 1.33
SMAD1-211ENST00000512019 TAF1CQ15572 869 aaPredicted RBP23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms