RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 PALD1Q9ULE6 856 aa16.16■□□□□ 0.18
RNF4-215ENST00000511843 CHGBP05060 677 aa16.15■□□□□ 0.18
RNF4-215ENST00000511843 PTPRAP18433 802 aa16.15■□□□□ 0.18
RNF4-215ENST00000511843 ATP5JP18859 108 aa16.15■□□□□ 0.18
RNF4-215ENST00000511843 CAP1Q01518 475 aa16.15■□□□□ 0.18
RNF4-215ENST00000511843 TTF1Q15361 905 aaPredicted RBP16.15■□□□□ 0.18
RNF4-215ENST00000511843 SLC9C2Q5TAH2 1124 aa16.15■□□□□ 0.18
RNF4-215ENST00000511843 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.15■□□□□ 0.18
RNF4-215ENST00000511843 PICK1Q9NRD5 415 aa16.15■□□□□ 0.18
RNF4-215ENST00000511843 KCNH4Q9UQ05 1017 aa16.15■□□□□ 0.18
RNF4-215ENST00000511843 ZHX2Q9Y6X8 837 aa16.15■□□□□ 0.18
RNF4-215ENST00000511843 MYH8P13535 1937 aa16.15■□□□□ 0.18
RNF4-215ENST00000511843 CTNND1O60716 968 aaKnown RBP16.14■□□□□ 0.17
RNF4-215ENST00000511843 MOGSQ13724 837 aa16.14■□□□□ 0.17
RNF4-215ENST00000511843 SHROOM1Q2M3G4 852 aaPredicted RBP16.14■□□□□ 0.17
RNF4-215ENST00000511843 NOM1Q5C9Z4 860 aaKnown RBP16.14■□□□□ 0.17
RNF4-215ENST00000511843 CD99L2Q8TCZ2 262 aa16.14■□□□□ 0.17
RNF4-215ENST00000511843 DNAJC18Q9H819 358 aa16.14■□□□□ 0.17
RNF4-215ENST00000511843 PAG1Q9NWQ8 432 aa16.14■□□□□ 0.17
RNF4-215ENST00000511843 ZNF532Q9HCE3 1301 aa16.14■□□□□ 0.17
RNF4-215ENST00000511843 LOC285556D6RIA3 1793 aa16.13■□□□□ 0.17
RNF4-215ENST00000511843 TCRBV5S4A2TA0A5A2 114 aa16.13■□□□□ 0.17
RNF4-215ENST00000511843 TBC1D12O60347 775 aa16.13■□□□□ 0.17
RNF4-215ENST00000511843 ECM2O94769 699 aaPredicted RBP16.13■□□□□ 0.17
RNF4-215ENST00000511843 HAUS7Q99871 368 aa16.13■□□□□ 0.17
RNF4-215ENST00000511843 RIOK1Q9BRS2 568 aaKnown RBP16.13■□□□□ 0.17
RNF4-215ENST00000511843 MGAMO43451 1857 aa16.12■□□□□ 0.17
RNF4-215ENST00000511843 HTTP42858 3142 aa16.12■□□□□ 0.17
RNF4-215ENST00000511843 MAGEB6P1A0A0J9YX57 407 aa16.12■□□□□ 0.17
RNF4-215ENST00000511843 TRIM75PA6NK02 468 aa16.12■□□□□ 0.17
RNF4-215ENST00000511843 USP5P45974 858 aa16.12■□□□□ 0.17
RNF4-215ENST00000511843 JAG1P78504 1218 aa16.12■□□□□ 0.17
RNF4-215ENST00000511843 ZFYVE28Q9HCC9 887 aa16.12■□□□□ 0.17
RNF4-215ENST00000511843 PI4KBQ9UBF8 816 aa16.12■□□□□ 0.17
RNF4-215ENST00000511843 AFG3L2Q9Y4W6 797 aa16.12■□□□□ 0.17
RNF4-215ENST00000511843 PDHXO00330 501 aa16.11■□□□□ 0.17
RNF4-215ENST00000511843 IGSF3O75054 1194 aa16.11■□□□□ 0.17
RNF4-215ENST00000511843 SP3Q02447 781 aa16.11■□□□□ 0.17
RNF4-215ENST00000511843 EVX2Q03828 476 aa16.11■□□□□ 0.17
RNF4-215ENST00000511843 GPAT2Q6NUI2 795 aa16.11■□□□□ 0.17
RNF4-215ENST00000511843 GADL1Q6ZQY3 521 aa16.11■□□□□ 0.17
RNF4-215ENST00000511843 LCORLQ8N3X6 602 aa16.11■□□□□ 0.17
RNF4-215ENST00000511843 CRACR2BQ8N4Y2 399 aaPredicted RBP16.11■□□□□ 0.17
RNF4-215ENST00000511843 OTUD7AQ8TE49 926 aaPredicted RBP16.11■□□□□ 0.17
RNF4-215ENST00000511843 DHX36Q9H2U1 1008 aaKnown RBP16.11■□□□□ 0.17
RNF4-215ENST00000511843 ECHDC1Q9NTX5 307 aa16.11■□□□□ 0.17
RNF4-215ENST00000511843 HERC5Q9UII4 1024 aaKnown RBP16.11■□□□□ 0.17
RNF4-215ENST00000511843 A0A0G2JLL6 359 aaPredicted RBP16.1■□□□□ 0.17
RNF4-215ENST00000511843 CXCL11O14625 94 aa16.1■□□□□ 0.17
RNF4-215ENST00000511843 GDF11O95390 407 aa16.1■□□□□ 0.17
RNF4-215ENST00000511843 ADD2P35612 726 aa16.1■□□□□ 0.17
RNF4-215ENST00000511843 CAP2P40123 477 aa16.1■□□□□ 0.17
RNF4-215ENST00000511843 OTOP1Q7RTM1 612 aa16.1■□□□□ 0.17
RNF4-215ENST00000511843 PRRT2Q7Z6L0 340 aaPredicted RBP16.1■□□□□ 0.17
RNF4-215ENST00000511843 ANKRD23Q86SG2 305 aa16.1■□□□□ 0.17
RNF4-215ENST00000511843 TRIM34Q9BYJ4 488 aa16.1■□□□□ 0.17
RNF4-215ENST00000511843 ARMT1Q9H993 441 aa16.1■□□□□ 0.17
RNF4-215ENST00000511843 HPS5Q9UPZ3 1129 aa16.1■□□□□ 0.17
RNF4-215ENST00000511843 TRIM17Q9Y577 477 aa16.1■□□□□ 0.17
RNF4-215ENST00000511843 TLR2O60603 784 aa16.09■□□□□ 0.17
RNF4-215ENST00000511843 HLA-DOAP06340 250 aa16.09■□□□□ 0.17
RNF4-215ENST00000511843 SDR42E1Q8WUS8 393 aa16.09■□□□□ 0.17
RNF4-215ENST00000511843 ERO1AQ96HE7 468 aa16.09■□□□□ 0.17
RNF4-215ENST00000511843 ARHGAP39Q9C0H5 1083 aa16.09■□□□□ 0.17
RNF4-215ENST00000511843 CPA4Q9UI42 421 aa16.09■□□□□ 0.17
RNF4-215ENST00000511843 PRKAB2O43741 272 aa16.08■□□□□ 0.16
RNF4-215ENST00000511843 MBD4O95243 580 aa16.08■□□□□ 0.16
RNF4-215ENST00000511843 CYP2C8P10632 490 aa16.08■□□□□ 0.16
RNF4-215ENST00000511843 SPP2Q13103 211 aa16.08■□□□□ 0.16
RNF4-215ENST00000511843 ZCCHC17Q9NP64 241 aaKnown RBP16.08■□□□□ 0.16
RNF4-215ENST00000511843 CENPFP49454 3210 aa16.07■□□□□ 0.16
RNF4-215ENST00000511843 CYP2D6P10635 497 aa16.07■□□□□ 0.16
RNF4-215ENST00000511843 PLCD1P51178 756 aa16.07■□□□□ 0.16
RNF4-215ENST00000511843 SOX10P56693 466 aa16.07■□□□□ 0.16
RNF4-215ENST00000511843 FBXO46Q6PJ61 603 aaPredicted RBP16.07■□□□□ 0.16
RNF4-215ENST00000511843 TMED8Q6PL24 325 aaPredicted RBP16.07■□□□□ 0.16
RNF4-215ENST00000511843 METTL16Q86W50 562 aaKnown RBP16.07■□□□□ 0.16
RNF4-215ENST00000511843 CERS3Q8IU89 383 aa16.07■□□□□ 0.16
RNF4-215ENST00000511843 FOXP4Q8IVH2 680 aaPredicted RBP16.07■□□□□ 0.16
RNF4-215ENST00000511843 GPATCH3Q96I76 525 aa16.07■□□□□ 0.16
RNF4-215ENST00000511843 CRNKL1Q9BZJ0 848 aaKnown RBP16.07■□□□□ 0.16
RNF4-215ENST00000511843 ADGRA2Q96PE1 1338 aa16.07■□□□□ 0.16
RNF4-215ENST00000511843 USP17L5A8MUK1 530 aa16.06■□□□□ 0.16
RNF4-215ENST00000511843 HMGCS2P54868 508 aa16.06■□□□□ 0.16
RNF4-215ENST00000511843 PKN2Q16513 984 aaKnown RBP16.06■□□□□ 0.16
RNF4-215ENST00000511843 TREML2Q5T2D2 321 aa16.06■□□□□ 0.16
RNF4-215ENST00000511843 ZNF280CQ8ND82 737 aa16.06■□□□□ 0.16
RNF4-215ENST00000511843 EXOC6Q8TAG9 804 aa16.06■□□□□ 0.16
RNF4-215ENST00000511843 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.06■□□□□ 0.16
RNF4-215ENST00000511843 EFCC1Q9HA90 598 aa16.06■□□□□ 0.16
RNF4-215ENST00000511843 MCM9Q9NXL9 1143 aa16.06■□□□□ 0.16
RNF4-215ENST00000511843 SUPT16HQ9Y5B9 1047 aaKnown RBP16.06■□□□□ 0.16
RNF4-215ENST00000511843 SMIM22K7EJ46 135 aa16.05■□□□□ 0.16
RNF4-215ENST00000511843 POLR3DP05423 398 aaPredicted RBP16.05■□□□□ 0.16
RNF4-215ENST00000511843 MTMR2Q13614 643 aa16.05■□□□□ 0.16
RNF4-215ENST00000511843 ANKRD45Q5TZF3 282 aa16.05■□□□□ 0.16
RNF4-215ENST00000511843 C17orf99Q6UX52 265 aa16.05■□□□□ 0.16
RNF4-215ENST00000511843 FASTKD5Q7L8L6 764 aaKnown RBP16.05■□□□□ 0.16
RNF4-215ENST00000511843 PUS7LQ9H0K6 701 aaKnown RBP16.05■□□□□ 0.16
RNF4-215ENST00000511843 DCP1AQ9NPI6 582 aaPredicted RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms