RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 SART1O43290 800 aaKnown RBP5.35□□□□□ -1.55
TRAPPC11-207ENST00000511409 GRIN3BO60391 1043 aa5.35□□□□□ -1.55
TRAPPC11-207ENST00000511409 TXKP42681 527 aa5.35□□□□□ -1.55
TRAPPC11-207ENST00000511409 NASPP49321 788 aaPredicted RBP5.35□□□□□ -1.55
TRAPPC11-207ENST00000511409 CDK8P49336 464 aa5.35□□□□□ -1.55
TRAPPC11-207ENST00000511409 ID3Q02535 119 aa5.35□□□□□ -1.55
TRAPPC11-207ENST00000511409 INPP5AQ14642 412 aa5.35□□□□□ -1.55
TRAPPC11-207ENST00000511409 SF3A1Q15459 793 aaKnown RBP5.35□□□□□ -1.55
TRAPPC11-207ENST00000511409 KIF4BQ2VIQ3 1234 aa5.35□□□□□ -1.55
TRAPPC11-207ENST00000511409 FBXW10Q5XX13 1052 aa5.35□□□□□ -1.55
TRAPPC11-207ENST00000511409 LRFN4Q6PJG9 635 aa5.35□□□□□ -1.55
TRAPPC11-207ENST00000511409 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.35□□□□□ -1.55
TRAPPC11-207ENST00000511409 HDXQ7Z353 690 aa5.35□□□□□ -1.55
TRAPPC11-207ENST00000511409 SLC43A3Q8NBI5 491 aa5.35□□□□□ -1.55
TRAPPC11-207ENST00000511409 CPLX3Q8WVH0 158 aa5.35□□□□□ -1.55
TRAPPC11-207ENST00000511409 PLPPR2Q96GM1 343 aa5.35□□□□□ -1.55
TRAPPC11-207ENST00000511409 MYRFLQ96LU7 910 aa5.35□□□□□ -1.55
TRAPPC11-207ENST00000511409 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.35□□□□□ -1.55
TRAPPC11-207ENST00000511409 GINM1Q9NU53 330 aa5.35□□□□□ -1.55
TRAPPC11-207ENST00000511409 GSC2O15499 205 aa5.34□□□□□ -1.55
TRAPPC11-207ENST00000511409 TIAF1O95411 115 aa5.34□□□□□ -1.55
TRAPPC11-207ENST00000511409 SSBP05455 408 aaKnown RBP eCLIP5.34□□□□□ -1.55
TRAPPC11-207ENST00000511409 ATF4P18848 351 aaPredicted RBP5.34□□□□□ -1.55
TRAPPC11-207ENST00000511409 ATP2B1P20020 1258 aa5.34□□□□□ -1.55
TRAPPC11-207ENST00000511409 ZNF165P49910 485 aa5.34□□□□□ -1.55
TRAPPC11-207ENST00000511409 GK5Q6ZS86 529 aa5.34□□□□□ -1.55
TRAPPC11-207ENST00000511409 DYMQ7RTS9 669 aa5.34□□□□□ -1.55
TRAPPC11-207ENST00000511409 REC114Q7Z4M0 266 aa5.34□□□□□ -1.55
TRAPPC11-207ENST00000511409 C12orf40Q86WS4 652 aa5.34□□□□□ -1.55
TRAPPC11-207ENST00000511409 RASGRP4Q8TDF6 673 aa5.34□□□□□ -1.55
TRAPPC11-207ENST00000511409 BRMS1Q9HCU9 246 aa5.34□□□□□ -1.55
TRAPPC11-207ENST00000511409 PPP1R9AQ9ULJ8 1098 aa5.34□□□□□ -1.55
TRAPPC11-207ENST00000511409 RAXQ9Y2V3 346 aa5.34□□□□□ -1.55
TRAPPC11-207ENST00000511409 SNCAIPQ9Y6H5 919 aa5.34□□□□□ -1.55
TRAPPC11-207ENST00000511409 DRD2P14416 443 aa5.33□□□□□ -1.56
TRAPPC11-207ENST00000511409 YBX3P16989 372 aaKnown RBP eCLIP5.33□□□□□ -1.56
TRAPPC11-207ENST00000511409 ZC3H12AQ5D1E8 599 aaKnown RBP5.33□□□□□ -1.56
TRAPPC11-207ENST00000511409 SLITRK4Q8IW52 837 aa5.33□□□□□ -1.56
TRAPPC11-207ENST00000511409 SEC16BQ96JE7 1060 aa5.33□□□□□ -1.56
TRAPPC11-207ENST00000511409 DRC1Q96MC2 740 aa5.33□□□□□ -1.56
TRAPPC11-207ENST00000511409 FERD3LQ96RJ6 166 aa5.33□□□□□ -1.56
TRAPPC11-207ENST00000511409 LRRC3Q9BY71 257 aa5.33□□□□□ -1.56
TRAPPC11-207ENST00000511409 PIDD1Q9HB75 910 aa5.33□□□□□ -1.56
TRAPPC11-207ENST00000511409 CACNA2D2Q9NY47 1150 aa5.33□□□□□ -1.56
TRAPPC11-207ENST00000511409 ARID1BQ8NFD5 2236 aaPredicted RBP5.32□□□□□ -1.56
TRAPPC11-207ENST00000511409 TMPRSS2O15393 492 aa5.32□□□□□ -1.56
TRAPPC11-207ENST00000511409 GAS2O43903 313 aaKnown RBP5.32□□□□□ -1.56
TRAPPC11-207ENST00000511409 ADH5P11766 374 aa5.32□□□□□ -1.56
TRAPPC11-207ENST00000511409 FSTP19883 344 aa5.32□□□□□ -1.56
TRAPPC11-207ENST00000511409 GTF2F1P35269 517 aaKnown RBP eCLIP5.32□□□□□ -1.56
TRAPPC11-207ENST00000511409 ASPAP45381 313 aa5.32□□□□□ -1.56
TRAPPC11-207ENST00000511409 PREPP48147 710 aa5.32□□□□□ -1.56
TRAPPC11-207ENST00000511409 CD97P48960 835 aa5.32□□□□□ -1.56
TRAPPC11-207ENST00000511409 ETF1P62495 437 aaKnown RBP5.32□□□□□ -1.56
TRAPPC11-207ENST00000511409 SOX4Q06945 474 aaPredicted RBP5.32□□□□□ -1.56
TRAPPC11-207ENST00000511409 COL9A2Q14055 689 aaPredicted RBP5.32□□□□□ -1.56
TRAPPC11-207ENST00000511409 PPM1JQ5JR12 505 aa5.32□□□□□ -1.56
TRAPPC11-207ENST00000511409 CCDC81Q6ZN84 652 aa5.32□□□□□ -1.56
TRAPPC11-207ENST00000511409 CLEC10AQ8IUN9 316 aa5.32□□□□□ -1.56
TRAPPC11-207ENST00000511409 FAM20CQ8IXL6 584 aa5.32□□□□□ -1.56
TRAPPC11-207ENST00000511409 UTP4Q969X6 686 aaKnown RBP5.32□□□□□ -1.56
TRAPPC11-207ENST00000511409 CRBNQ96SW2 442 aa5.32□□□□□ -1.56
TRAPPC11-207ENST00000511409 KRTAP4-7Q9BYR0 210 aa5.32□□□□□ -1.56
TRAPPC11-207ENST00000511409 PPT2Q9UMR5 302 aa5.32□□□□□ -1.56
TRAPPC11-207ENST00000511409 PCDHB14Q9Y5E9 798 aa5.32□□□□□ -1.56
TRAPPC11-207ENST00000511409 CORINQ9Y5Q5 1042 aa5.32□□□□□ -1.56
TRAPPC11-207ENST00000511409 GFRA2O00451 464 aa5.31□□□□□ -1.56
TRAPPC11-207ENST00000511409 RNGTTO60942 597 aaKnown RBP5.31□□□□□ -1.56
TRAPPC11-207ENST00000511409 PLCG1P19174 1290 aa5.31□□□□□ -1.56
TRAPPC11-207ENST00000511409 USP11P51784 963 aa5.31□□□□□ -1.56
TRAPPC11-207ENST00000511409 ERVK-24P63145 666 aa5.31□□□□□ -1.56
TRAPPC11-207ENST00000511409 PDE4BQ07343 736 aa5.31□□□□□ -1.56
TRAPPC11-207ENST00000511409 MLECQ14165 292 aa5.31□□□□□ -1.56
TRAPPC11-207ENST00000511409 LCE1DQ5T752 114 aa5.31□□□□□ -1.56
TRAPPC11-207ENST00000511409 CDC37L1Q7L3B6 337 aa5.31□□□□□ -1.56
TRAPPC11-207ENST00000511409 MCF2L2Q86YR7 1114 aa5.31□□□□□ -1.56
TRAPPC11-207ENST00000511409 ANAPC16Q96DE5 110 aa5.31□□□□□ -1.56
TRAPPC11-207ENST00000511409 FANCD2OSQ96PS1 177 aa5.31□□□□□ -1.56
TRAPPC11-207ENST00000511409 FAM83CQ9BQN1 747 aa5.31□□□□□ -1.56
TRAPPC11-207ENST00000511409 SRRTQ9BXP5 876 aaKnown RBP5.31□□□□□ -1.56
TRAPPC11-207ENST00000511409 ATXN3LQ9H3M9 355 aa5.31□□□□□ -1.56
TRAPPC11-207ENST00000511409 SSU72Q9NP77 194 aaKnown RBP5.31□□□□□ -1.56
TRAPPC11-207ENST00000511409 PCMTD2Q9NV79 361 aa5.31□□□□□ -1.56
TRAPPC11-207ENST00000511409 CRIM1Q9NZV1 1036 aa5.31□□□□□ -1.56
TRAPPC11-207ENST00000511409 STOML1Q9UBI4 398 aa5.31□□□□□ -1.56
TRAPPC11-207ENST00000511409 POLR3KQ9Y2Y1 108 aaPredicted RBP5.31□□□□□ -1.56
TRAPPC11-207ENST00000511409 PCDHGC5Q9Y5F6 944 aa5.31□□□□□ -1.56
TRAPPC11-207ENST00000511409 MRVI1Q9Y6F6 885 aa5.31□□□□□ -1.56
TRAPPC11-207ENST00000511409 KIAA1324LA8MWY0 1029 aaPredicted RBP5.3□□□□□ -1.56
TRAPPC11-207ENST00000511409 HTR3BO95264 441 aa5.3□□□□□ -1.56
TRAPPC11-207ENST00000511409 IGLV1-40P01703 118 aa5.3□□□□□ -1.56
TRAPPC11-207ENST00000511409 PGRP06401 933 aa5.3□□□□□ -1.56
TRAPPC11-207ENST00000511409 FGRP09769 529 aa5.3□□□□□ -1.56
TRAPPC11-207ENST00000511409 HCLS1P14317 486 aaPredicted RBP5.3□□□□□ -1.56
TRAPPC11-207ENST00000511409 RAB6AP20340 208 aa5.3□□□□□ -1.56
TRAPPC11-207ENST00000511409 GRK4P32298 578 aa5.3□□□□□ -1.56
TRAPPC11-207ENST00000511409 SOX9P48436 509 aa5.3□□□□□ -1.56
TRAPPC11-207ENST00000511409 CLCQ05315 142 aa5.3□□□□□ -1.56
TRAPPC11-207ENST00000511409 TTLL4Q14679 1199 aa5.3□□□□□ -1.56
TRAPPC11-207ENST00000511409 RNF43Q68DV7 783 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms