RNA–Protein interactions for RNA: ENST00000511116.5

SMAD5-207, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-207ENST00000511116 MCAMP43121 646 aa28.18■■■□□ 2.1
SMAD5-207ENST00000511116 FAM110CQ1W6H9 321 aa28.18■■■□□ 2.1
SMAD5-207ENST00000511116 TREML2Q5T2D2 321 aa28.18■■■□□ 2.1
SMAD5-207ENST00000511116 TBC1D9Q6ZT07 1266 aa28.18■■■□□ 2.1
SMAD5-207ENST00000511116 FAM196BA6NMK8 535 aa28.17■■■□□ 2.1
SMAD5-207ENST00000511116 TNPO2O14787 897 aaKnown RBP28.17■■■□□ 2.1
SMAD5-207ENST00000511116 IPO8O15397 1037 aaKnown RBP28.17■■■□□ 2.1
SMAD5-207ENST00000511116 SGPL1O95470 568 aa28.17■■■□□ 2.1
SMAD5-207ENST00000511116 ATF7IPQ6VMQ6 1270 aa28.17■■■□□ 2.1
SMAD5-207ENST00000511116 HTATIP2Q9BUP3 242 aa28.17■■■□□ 2.1
SMAD5-207ENST00000511116 SIPA1L1O43166 1804 aa28.16■■■□□ 2.1
SMAD5-207ENST00000511116 CAP2P40123 477 aa28.16■■■□□ 2.1
SMAD5-207ENST00000511116 PRO3102Q9H379 93 aa28.16■■■□□ 2.1
SMAD5-207ENST00000511116 PNMA3Q9UL41 463 aa28.16■■■□□ 2.1
SMAD5-207ENST00000511116 TNNQ9UQP3 1299 aa28.16■■■□□ 2.1
SMAD5-207ENST00000511116 INHAP05111 366 aa28.15■■■□□ 2.1
SMAD5-207ENST00000511116 UQCRFS1P1P0C7P4 283 aa28.15■■■□□ 2.1
SMAD5-207ENST00000511116 ELNP15502 786 aa28.15■■■□□ 2.1
SMAD5-207ENST00000511116 RRP1BQ14684 758 aaKnown RBP28.15■■■□□ 2.1
SMAD5-207ENST00000511116 SH3D19Q5HYK7 790 aa28.15■■■□□ 2.1
SMAD5-207ENST00000511116 GORABQ5T7V8 394 aa28.15■■■□□ 2.1
SMAD5-207ENST00000511116 ZNF280CQ8ND82 737 aa28.15■■■□□ 2.1
SMAD5-207ENST00000511116 DPF3Q92784 378 aa28.15■■■□□ 2.1
SMAD5-207ENST00000511116 GPR108Q9NPR9 543 aa28.15■■■□□ 2.1
SMAD5-207ENST00000511116 PAK6Q9NQU5 681 aaPredicted RBP28.15■■■□□ 2.1
SMAD5-207ENST00000511116 HERC5Q9UII4 1024 aaKnown RBP28.15■■■□□ 2.1
SMAD5-207ENST00000511116 MAST2Q6P0Q8 1798 aa28.14■■■□□ 2.1
SMAD5-207ENST00000511116 FARP2O94887 1054 aaPredicted RBP28.14■■■□□ 2.1
SMAD5-207ENST00000511116 SPP2Q13103 211 aa28.14■■■□□ 2.1
SMAD5-207ENST00000511116 G3BP1Q13283 466 aaKnown RBP eCLIP28.14■■■□□ 2.1
SMAD5-207ENST00000511116 CHRDL2Q6WN34 429 aa28.14■■■□□ 2.1
SMAD5-207ENST00000511116 ANKRD13CQ8N6S4 541 aa28.14■■■□□ 2.1
SMAD5-207ENST00000511116 RAI14Q9P0K7 980 aa28.14■■■□□ 2.1
SMAD5-207ENST00000511116 GCLCP48506 637 aaPredicted RBP28.13■■■□□ 2.09
SMAD5-207ENST00000511116 POLA2Q14181 598 aa28.12■■■□□ 2.09
SMAD5-207ENST00000511116 METTL16Q86W50 562 aaKnown RBP28.12■■■□□ 2.09
SMAD5-207ENST00000511116 TEX11Q8IYF3 940 aa28.12■■■□□ 2.09
SMAD5-207ENST00000511116 COA7Q96BR5 231 aa28.12■■■□□ 2.09
SMAD5-207ENST00000511116 CRISPLD2Q9H0B8 497 aa28.12■■■□□ 2.09
SMAD5-207ENST00000511116 USP17L5A8MUK1 530 aa28.11■■■□□ 2.09
SMAD5-207ENST00000511116 BCAR3O75815 825 aa28.11■■■□□ 2.09
SMAD5-207ENST00000511116 PPP4CP60510 307 aa28.11■■■□□ 2.09
SMAD5-207ENST00000511116 SH3RF3Q8TEJ3 882 aaPredicted RBP28.11■■■□□ 2.09
SMAD5-207ENST00000511116 LRP2BPQ9P2M1 347 aa28.11■■■□□ 2.09
SMAD5-207ENST00000511116 RBM27Q9P2N5 1060 aaKnown RBP28.11■■■□□ 2.09
SMAD5-207ENST00000511116 FOCADQ5VW36 1801 aa28.11■■■□□ 2.09
SMAD5-207ENST00000511116 CDK5RAP2Q96SN8 1893 aa28.1■■■□□ 2.09
SMAD5-207ENST00000511116 IGSF3O75054 1194 aa28.1■■■□□ 2.09
SMAD5-207ENST00000511116 HMGCS2P54868 508 aa28.1■■■□□ 2.09
SMAD5-207ENST00000511116 PABPC4Q13310 644 aaKnown RBP eCLIP28.1■■■□□ 2.09
SMAD5-207ENST00000511116 WDR18Q9BV38 432 aa28.1■■■□□ 2.09
SMAD5-207ENST00000511116 DHX36Q9H2U1 1008 aaKnown RBP28.1■■■□□ 2.09
SMAD5-207ENST00000511116 PI4KBQ9UBF8 816 aa28.1■■■□□ 2.09
SMAD5-207ENST00000511116 ZNF512BQ96KM6 892 aaPredicted RBP28.09■■■□□ 2.09
SMAD5-207ENST00000511116 ASCC2Q9H1I8 757 aaPredicted RBP28.09■■■□□ 2.09
SMAD5-207ENST00000511116 NR2E3Q9Y5X4 410 aa28.09■■■□□ 2.09
SMAD5-207ENST00000511116 ZBTB7BO15156 539 aaPredicted RBP28.08■■■□□ 2.09
SMAD5-207ENST00000511116 TNNI3KQ59H18 835 aa28.08■■■□□ 2.09
SMAD5-207ENST00000511116 SSH3Q8TE77 659 aa28.08■■■□□ 2.09
SMAD5-207ENST00000511116 DEFB118Q96PH6 123 aa28.08■■■□□ 2.09
SMAD5-207ENST00000511116 MORF4L1Q9UBU8 362 aa28.08■■■□□ 2.09
SMAD5-207ENST00000511116 GJD2Q9UKL4 321 aa28.08■■■□□ 2.09
SMAD5-207ENST00000511116 FPGT-TNNI3KV9GXZ4 949 aa28.08■■■□□ 2.09
SMAD5-207ENST00000511116 PLCG2P16885 1265 aa28.07■■■□□ 2.08
SMAD5-207ENST00000511116 NAA16Q6N069 864 aaPredicted RBP28.07■■■□□ 2.08
SMAD5-207ENST00000511116 FRAT1Q92837 279 aaPredicted RBP28.07■■■□□ 2.08
SMAD5-207ENST00000511116 DNAJC18Q9H819 358 aa28.07■■■□□ 2.08
SMAD5-207ENST00000511116 AS3MTQ9HBK9 375 aa28.07■■■□□ 2.08
SMAD5-207ENST00000511116 BAG3O95817 575 aa28.06■■■□□ 2.08
SMAD5-207ENST00000511116 ADGRA1Q86SQ6 560 aa28.06■■■□□ 2.08
SMAD5-207ENST00000511116 TMEM57Q8N5G2 664 aa28.06■■■□□ 2.08
SMAD5-207ENST00000511116 CLUAP1Q96AJ1 413 aa28.06■■■□□ 2.08
SMAD5-207ENST00000511116 DBNDD2Q9BQY9 259 aa28.06■■■□□ 2.08
SMAD5-207ENST00000511116 AATFQ9NY61 560 aaKnown RBP eCLIP28.06■■■□□ 2.08
SMAD5-207ENST00000511116 PLXNB2O15031 1838 aa28.06■■■□□ 2.08
SMAD5-207ENST00000511116 CYP2E1P05181 493 aaPredicted RBP28.05■■■□□ 2.08
SMAD5-207ENST00000511116 ASNSP08243 561 aa28.05■■■□□ 2.08
SMAD5-207ENST00000511116 HOXA7P31268 230 aaPredicted RBP28.05■■■□□ 2.08
SMAD5-207ENST00000511116 BACE1P56817 501 aa28.05■■■□□ 2.08
SMAD5-207ENST00000511116 NOL10Q9BSC4 688 aaKnown RBP28.05■■■□□ 2.08
SMAD5-207ENST00000511116 GINM1Q9NU53 330 aa28.05■■■□□ 2.08
SMAD5-207ENST00000511116 MYO5AQ9Y4I1 1855 aaKnown RBP28.05■■■□□ 2.08
SMAD5-207ENST00000511116 LAMA3Q16787 3333 aa28.05■■■□□ 2.08
SMAD5-207ENST00000511116 FLT1P17948 1338 aa28.04■■■□□ 2.08
SMAD5-207ENST00000511116 HMGCRP04035 888 aa28.04■■■□□ 2.08
SMAD5-207ENST00000511116 JAG1P78504 1218 aa28.04■■■□□ 2.08
SMAD5-207ENST00000511116 ATP8B2P98198 1209 aa28.04■■■□□ 2.08
SMAD5-207ENST00000511116 FOXP4Q8IVH2 680 aaPredicted RBP28.04■■■□□ 2.08
SMAD5-207ENST00000511116 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.04■■■□□ 2.08
SMAD5-207ENST00000511116 SNRKQ9NRH2 765 aa28.04■■■□□ 2.08
SMAD5-207ENST00000511116 ALPK3Q96L96 1907 aa28.04■■■□□ 2.08
SMAD5-207ENST00000511116 TFRCP02786 760 aaKnown RBP28.03■■■□□ 2.08
SMAD5-207ENST00000511116 CCDC158Q5M9N0 1113 aa28.03■■■□□ 2.08
SMAD5-207ENST00000511116 TTC39AQ5SRH9 613 aa28.03■■■□□ 2.08
SMAD5-207ENST00000511116 NOP58Q9Y2X3 529 aaKnown RBP28.03■■■□□ 2.08
SMAD5-207ENST00000511116 A0A1W2PPC1 479 aa28.02■■■□□ 2.08
SMAD5-207ENST00000511116 MTMR2Q13614 643 aa28.02■■■□□ 2.08
SMAD5-207ENST00000511116 ZKSCAN2Q63HK3 967 aa28.02■■■□□ 2.08
SMAD5-207ENST00000511116 ANKLE1Q8NAG6 615 aa28.02■■■□□ 2.08
SMAD5-207ENST00000511116 TGFBRAP1Q8WUH2 860 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms