RNA–Protein interactions for RNA: ENST00000511032.5

DHFR-205, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-205ENST00000511032 OGFOD1Q8N543 542 aa12.51□□□□□ -0.41
DHFR-205ENST00000511032 NECAB1Q8N987 351 aa12.51□□□□□ -0.41
DHFR-205ENST00000511032 MKNK2Q9HBH9 465 aa12.51□□□□□ -0.41
DHFR-205ENST00000511032 ZSWIM5Q9P217 1185 aa12.51□□□□□ -0.41
DHFR-205ENST00000511032 TAOK2Q9UL54 1235 aa12.51□□□□□ -0.41
DHFR-205ENST00000511032 ZNRF3Q9ULT6 936 aa12.51□□□□□ -0.41
DHFR-205ENST00000511032 PSME4Q14997 1843 aa12.51□□□□□ -0.41
DHFR-205ENST00000511032 CCDC196A0A1B0GTZ2 297 aa12.5□□□□□ -0.41
DHFR-205ENST00000511032 RANBP6O60518 1105 aaKnown RBP12.5□□□□□ -0.41
DHFR-205ENST00000511032 LARGE1O95461 756 aa12.5□□□□□ -0.41
DHFR-205ENST00000511032 HLA-DOAP06340 250 aa12.5□□□□□ -0.41
DHFR-205ENST00000511032 CRKP46108 304 aa12.5□□□□□ -0.41
DHFR-205ENST00000511032 RCAN1P53805 252 aa12.5□□□□□ -0.41
DHFR-205ENST00000511032 PPP2R5BQ15173 497 aa12.5□□□□□ -0.41
DHFR-205ENST00000511032 C12orf60Q5U649 245 aa12.5□□□□□ -0.41
DHFR-205ENST00000511032 SGMS1Q86VZ5 419 aa12.5□□□□□ -0.41
DHFR-205ENST00000511032 KIAA0825Q8IV33 1275 aa12.5□□□□□ -0.41
DHFR-205ENST00000511032 ZNF444Q8N0Y2 327 aaPredicted RBP12.5□□□□□ -0.41
DHFR-205ENST00000511032 CERS5Q8N5B7 392 aa12.5□□□□□ -0.41
DHFR-205ENST00000511032 ZDHHC15Q96MV8 337 aa12.5□□□□□ -0.41
DHFR-205ENST00000511032 ANP32EQ9BTT0 268 aa12.5□□□□□ -0.41
DHFR-205ENST00000511032 TMOD2Q9NZR1 351 aa12.5□□□□□ -0.41
DHFR-205ENST00000511032 BCS1LQ9Y276 419 aa12.5□□□□□ -0.41
DHFR-205ENST00000511032 SLC12A7Q9Y666 1083 aa12.5□□□□□ -0.41
DHFR-205ENST00000511032 ROBO3Q96MS0 1386 aa12.5□□□□□ -0.41
DHFR-205ENST00000511032 FLT1P17948 1338 aa12.49□□□□□ -0.41
DHFR-205ENST00000511032 TSPY2A6NKD2 308 aa12.49□□□□□ -0.41
DHFR-205ENST00000511032 ZBTB43O43298 467 aa12.49□□□□□ -0.41
DHFR-205ENST00000511032 FGRP09769 529 aa12.49□□□□□ -0.41
DHFR-205ENST00000511032 CALM1P0DP23 149 aa12.49□□□□□ -0.41
DHFR-205ENST00000511032 CALM2P0DP24 149 aa12.49□□□□□ -0.41
DHFR-205ENST00000511032 CALM3P0DP25 149 aa12.49□□□□□ -0.41
DHFR-205ENST00000511032 PDIA3P30101 505 aaKnown RBP12.49□□□□□ -0.41
DHFR-205ENST00000511032 METAP2P50579 478 aaKnown RBP eCLIP12.49□□□□□ -0.41
DHFR-205ENST00000511032 ANTXR2P58335 489 aa12.49□□□□□ -0.41
DHFR-205ENST00000511032 CYB5R4Q7L1T6 521 aa12.49□□□□□ -0.41
DHFR-205ENST00000511032 MAPKAPK5Q8IW41 473 aa12.49□□□□□ -0.41
DHFR-205ENST00000511032 STK11IPQ8N1F8 1099 aa12.49□□□□□ -0.41
DHFR-205ENST00000511032 TNPO1Q92973 898 aaKnown RBP12.49□□□□□ -0.41
DHFR-205ENST00000511032 SGIP1Q9BQI5 828 aa12.49□□□□□ -0.41
DHFR-205ENST00000511032 ZNF277Q9NRM2 450 aaPredicted RBP12.49□□□□□ -0.41
DHFR-205ENST00000511032 USP40Q9NVE5 1235 aa12.49□□□□□ -0.41
DHFR-205ENST00000511032 FOCADQ5VW36 1801 aa12.49□□□□□ -0.41
DHFR-205ENST00000511032 LTBP3Q9NS15 1303 aa12.49□□□□□ -0.41
DHFR-205ENST00000511032 STX6O43752 255 aa12.48□□□□□ -0.41
DHFR-205ENST00000511032 SCNN1DP51172 638 aa12.48□□□□□ -0.41
DHFR-205ENST00000511032 SCRN1Q12765 414 aa12.48□□□□□ -0.41
DHFR-205ENST00000511032 TNIP1Q15025 636 aa12.48□□□□□ -0.41
DHFR-205ENST00000511032 IFIT1BQ5T764 474 aaKnown RBP12.48□□□□□ -0.41
DHFR-205ENST00000511032 LARP1BQ659C4 914 aaKnown RBP12.48□□□□□ -0.41
DHFR-205ENST00000511032 RSBN1LQ6PCB5 846 aaPredicted RBP12.48□□□□□ -0.41
DHFR-205ENST00000511032 CATIPQ7Z7H3 387 aa12.48□□□□□ -0.41
DHFR-205ENST00000511032 MKRN1Q9UHC7 482 aaKnown RBP12.48□□□□□ -0.41
DHFR-205ENST00000511032 MYH1P12882 1939 aa12.48□□□□□ -0.41
DHFR-205ENST00000511032 FER1L6Q2WGJ9 1857 aa12.48□□□□□ -0.41
DHFR-205ENST00000511032 H3BQV1 296 aa12.47□□□□□ -0.41
DHFR-205ENST00000511032 BRD1O95696 1058 aa12.47□□□□□ -0.41
DHFR-205ENST00000511032 USP17L8P0C7I0 530 aa12.47□□□□□ -0.41
DHFR-205ENST00000511032 PTGER2P43116 358 aa12.47□□□□□ -0.41
DHFR-205ENST00000511032 RHBDL3P58872 404 aa12.47□□□□□ -0.41
DHFR-205ENST00000511032 CCT2P78371 535 aaKnown RBP12.47□□□□□ -0.41
DHFR-205ENST00000511032 IFFO2Q5TF58 517 aa12.47□□□□□ -0.41
DHFR-205ENST00000511032 APOA5Q6Q788 366 aa12.47□□□□□ -0.41
DHFR-205ENST00000511032 AGBL3Q8NEM8 1001 aa12.47□□□□□ -0.41
DHFR-205ENST00000511032 IGDCC4Q8TDY8 1250 aa12.47□□□□□ -0.41
DHFR-205ENST00000511032 ZSCAN10Q96SZ4 725 aaPredicted RBP12.47□□□□□ -0.41
DHFR-205ENST00000511032 TRIM34Q9BYJ4 488 aa12.47□□□□□ -0.41
DHFR-205ENST00000511032 LY9Q9HBG7 655 aa12.47□□□□□ -0.41
DHFR-205ENST00000511032 SWAP70Q9UH65 585 aa12.47□□□□□ -0.41
DHFR-205ENST00000511032 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.47□□□□□ -0.412e-8■■■□□ 17.8
DHFR-205ENST00000511032 CDK5RAP2Q96SN8 1893 aa12.47□□□□□ -0.41
DHFR-205ENST00000511032 ARFGEF1Q9Y6D6 1849 aa12.47□□□□□ -0.41
DHFR-205ENST00000511032 TNKSO95271 1327 aa12.47□□□□□ -0.41
DHFR-205ENST00000511032 SCN9AQ15858 1988 aa12.47□□□□□ -0.41
DHFR-205ENST00000511032 CYP2D7A0A087X1C5 515 aa12.46□□□□□ -0.41
DHFR-205ENST00000511032 GOLGA8AA7E2F4 631 aa12.46□□□□□ -0.41
DHFR-205ENST00000511032 VIL1P09327 827 aaKnown RBP12.46□□□□□ -0.41
DHFR-205ENST00000511032 TSPY3P0CV98 308 aa12.46□□□□□ -0.41
DHFR-205ENST00000511032 TSPY8P0CW00 308 aa12.46□□□□□ -0.41
DHFR-205ENST00000511032 ZSCAN22P10073 491 aaPredicted RBP12.46□□□□□ -0.41
DHFR-205ENST00000511032 SYT1P21579 422 aa12.46□□□□□ -0.41
DHFR-205ENST00000511032 MCM4P33991 863 aa12.46□□□□□ -0.41
DHFR-205ENST00000511032 PICALMQ13492 652 aa12.46□□□□□ -0.41
DHFR-205ENST00000511032 CSPP1Q1MSJ5 1256 aa12.46□□□□□ -0.41
DHFR-205ENST00000511032 PPP4R3BQ5MIZ7 849 aa12.46□□□□□ -0.41
DHFR-205ENST00000511032 CLEC17AQ6ZS10 378 aa12.46□□□□□ -0.41
DHFR-205ENST00000511032 DHX36Q9H2U1 1008 aaKnown RBP12.46□□□□□ -0.41
DHFR-205ENST00000511032 SAP30BPQ9UHR5 308 aaKnown RBP12.46□□□□□ -0.41
DHFR-205ENST00000511032 ECM29Q5VYK3 1845 aa12.46□□□□□ -0.41
DHFR-205ENST00000511032 PTPDC1A2A3K4 754 aa12.46□□□□□ -0.42
DHFR-205ENST00000511032 VPS37CA5D8V6 355 aaPredicted RBP12.46□□□□□ -0.42
DHFR-205ENST00000511032 MYO1BO43795 1136 aa12.46□□□□□ -0.42
DHFR-205ENST00000511032 EIF6P56537 245 aaKnown RBP12.46□□□□□ -0.42
DHFR-205ENST00000511032 COL9A3Q14050 684 aaPredicted RBP12.46□□□□□ -0.42
DHFR-205ENST00000511032 RTN1Q16799 776 aa12.46□□□□□ -0.42
DHFR-205ENST00000511032 CIAPIN1Q6FI81 312 aa12.46□□□□□ -0.42
DHFR-205ENST00000511032 CDC42EP5Q6NZY7 148 aa12.46□□□□□ -0.42
DHFR-205ENST00000511032 C16orf86Q6ZW13 317 aa12.46□□□□□ -0.42
DHFR-205ENST00000511032 MICU3Q86XE3 530 aa12.46□□□□□ -0.42
DHFR-205ENST00000511032 TRIM22Q8IYM9 498 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms