RNA–Protein interactions for RNA: ENST00000510331.1

LSM6-206, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-206ENST00000510331 SAP30BPQ9UHR5 308 aaKnown RBP22.57■■□□□ 1.2
LSM6-206ENST00000510331 PCDHB15Q9Y5E8 787 aa22.57■■□□□ 1.2
LSM6-206ENST00000510331 CTNND1O60716 968 aaKnown RBP22.56■■□□□ 1.2
LSM6-206ENST00000510331 PDE6AP16499 860 aa22.56■■□□□ 1.2
LSM6-206ENST00000510331 TTF1Q15361 905 aaPredicted RBP22.56■■□□□ 1.2
LSM6-206ENST00000510331 CRBNQ96SW2 442 aa22.56■■□□□ 1.2
LSM6-206ENST00000510331 BOLA2Q9H3K6 86 aa22.56■■□□□ 1.2
LSM6-206ENST00000510331 DNAJC18Q9H819 358 aa22.56■■□□□ 1.2
LSM6-206ENST00000510331 CAP1Q01518 475 aa22.55■■□□□ 1.2
LSM6-206ENST00000510331 RRP1BQ14684 758 aaKnown RBP22.55■■□□□ 1.2
LSM6-206ENST00000510331 CD99L2Q8TCZ2 262 aa22.55■■□□□ 1.2
LSM6-206ENST00000510331 DCTPP1Q9H773 170 aa22.55■■□□□ 1.2
LSM6-206ENST00000510331 ZFYVE28Q9HCC9 887 aa22.55■■□□□ 1.2
LSM6-206ENST00000510331 PALD1Q9ULE6 856 aa22.55■■□□□ 1.2
LSM6-206ENST00000510331 ZHX2Q9Y6X8 837 aa22.55■■□□□ 1.2
LSM6-206ENST00000510331 ATP5JP18859 108 aa22.54■■□□□ 1.2
LSM6-206ENST00000510331 SLC9C2Q5TAH2 1124 aa22.54■■□□□ 1.2
LSM6-206ENST00000510331 RIOK1Q9BRS2 568 aaKnown RBP22.54■■□□□ 1.2
LSM6-206ENST00000510331 DHX36Q9H2U1 1008 aaKnown RBP22.54■■□□□ 1.2
LSM6-206ENST00000510331 ZCCHC17Q9NP64 241 aaKnown RBP22.54■■□□□ 1.2
LSM6-206ENST00000510331 PAG1Q9NWQ8 432 aa22.54■■□□□ 1.2
LSM6-206ENST00000510331 ZNF532Q9HCE3 1301 aa22.54■■□□□ 1.2
LSM6-206ENST00000510331 ANKRD23Q86SG2 305 aa22.53■■□□□ 1.2
LSM6-206ENST00000510331 HAUS7Q99871 368 aa22.53■■□□□ 1.2
LSM6-206ENST00000510331 PI4KBQ9UBF8 816 aa22.53■■□□□ 1.2
LSM6-206ENST00000510331 HERC5Q9UII4 1024 aaKnown RBP22.53■■□□□ 1.2
LSM6-206ENST00000510331 HPS5Q9UPZ3 1129 aa22.53■■□□□ 1.2
LSM6-206ENST00000510331 AFG3L2Q9Y4W6 797 aa22.53■■□□□ 1.2
LSM6-206ENST00000510331 TRIM17Q9Y577 477 aa22.53■■□□□ 1.2
LSM6-206ENST00000510331 A0A0G2JLL6 359 aaPredicted RBP22.52■■□□□ 1.2
LSM6-206ENST00000510331 TCRBV5S4A2TA0A5A2 114 aa22.52■■□□□ 1.2
LSM6-206ENST00000510331 TRIM75PA6NK02 468 aa22.52■■□□□ 1.2
LSM6-206ENST00000510331 PDHXO00330 501 aa22.52■■□□□ 1.2
LSM6-206ENST00000510331 USP5P45974 858 aa22.52■■□□□ 1.2
LSM6-206ENST00000510331 SP3Q02447 781 aa22.52■■□□□ 1.2
LSM6-206ENST00000510331 TSHZ3Q63HK5 1081 aa22.52■■□□□ 1.2
LSM6-206ENST00000510331 TMED8Q6PL24 325 aaPredicted RBP22.52■■□□□ 1.2
LSM6-206ENST00000510331 OTOP1Q7RTM1 612 aa22.52■■□□□ 1.2
LSM6-206ENST00000510331 PRRT2Q7Z6L0 340 aaPredicted RBP22.52■■□□□ 1.2
LSM6-206ENST00000510331 ERO1AQ96HE7 468 aa22.52■■□□□ 1.2
LSM6-206ENST00000510331 ADGRA2Q96PE1 1338 aa22.52■■□□□ 1.2
LSM6-206ENST00000510331 CENPFP49454 3210 aa22.51■■□□□ 1.19
LSM6-206ENST00000510331 MAGEB6P1A0A0J9YX57 407 aa22.51■■□□□ 1.19
LSM6-206ENST00000510331 CXCL11O14625 94 aa22.51■■□□□ 1.19
LSM6-206ENST00000510331 PKN2Q16513 984 aaKnown RBP22.51■■□□□ 1.19
LSM6-206ENST00000510331 SHROOM1Q2M3G4 852 aaPredicted RBP22.51■■□□□ 1.19
LSM6-206ENST00000510331 SLFNL1Q499Z3 407 aa22.51■■□□□ 1.19
LSM6-206ENST00000510331 CERS3Q8IU89 383 aa22.51■■□□□ 1.19
LSM6-206ENST00000510331 TLR2O60603 784 aa22.5■■□□□ 1.19
LSM6-206ENST00000510331 CHGBP05060 677 aa22.5■■□□□ 1.19
LSM6-206ENST00000510331 CAP2P40123 477 aa22.5■■□□□ 1.19
LSM6-206ENST00000510331 GPAT2Q6NUI2 795 aa22.5■■□□□ 1.19
LSM6-206ENST00000510331 FBXO46Q6PJ61 603 aaPredicted RBP22.5■■□□□ 1.19
LSM6-206ENST00000510331 CRACR2BQ8N4Y2 399 aaPredicted RBP22.5■■□□□ 1.19
LSM6-206ENST00000510331 BAZ2AQ9UIF9 1905 aaKnown RBP22.5■■□□□ 1.19
LSM6-206ENST00000510331 HLA-DOAP06340 250 aa22.49■■□□□ 1.19
LSM6-206ENST00000510331 GADL1Q6ZQY3 521 aa22.49■■□□□ 1.19
LSM6-206ENST00000510331 METTL16Q86W50 562 aaKnown RBP22.49■■□□□ 1.19
LSM6-206ENST00000510331 LCORLQ8N3X6 602 aa22.49■■□□□ 1.19
LSM6-206ENST00000510331 TRIM34Q9BYJ4 488 aa22.49■■□□□ 1.19
LSM6-206ENST00000510331 ECHDC1Q9NTX5 307 aa22.49■■□□□ 1.19
LSM6-206ENST00000510331 GDF11O95390 407 aa22.48■■□□□ 1.19
LSM6-206ENST00000510331 ADD2P35612 726 aa22.48■■□□□ 1.19
LSM6-206ENST00000510331 JAG1P78504 1218 aa22.48■■□□□ 1.19
LSM6-206ENST00000510331 CPA4Q9UI42 421 aa22.48■■□□□ 1.19
LSM6-206ENST00000510331 MYH8P13535 1937 aa22.47■■□□□ 1.19
LSM6-206ENST00000510331 CYP2C8P10632 490 aa22.47■■□□□ 1.19
LSM6-206ENST00000510331 SOX10P56693 466 aa22.47■■□□□ 1.19
LSM6-206ENST00000510331 PARK7Q99497 189 aaKnown RBP22.47■■□□□ 1.19
LSM6-206ENST00000510331 ARHGAP39Q9C0H5 1083 aa22.47■■□□□ 1.19
LSM6-206ENST00000510331 MGAMO43451 1857 aa22.46■■□□□ 1.19
LSM6-206ENST00000510331 MBD4O95243 580 aa22.46■■□□□ 1.19
LSM6-206ENST00000510331 EVX2Q03828 476 aa22.46■■□□□ 1.19
LSM6-206ENST00000510331 SDR42E1Q8WUS8 393 aa22.46■■□□□ 1.19
LSM6-206ENST00000510331 CRNKL1Q9BZJ0 848 aaKnown RBP22.46■■□□□ 1.19
LSM6-206ENST00000510331 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.46■■□□□ 1.19
LSM6-206ENST00000510331 ARMT1Q9H993 441 aa22.46■■□□□ 1.19
LSM6-206ENST00000510331 EFCC1Q9HA90 598 aa22.46■■□□□ 1.19
LSM6-206ENST00000510331 ECM2O94769 699 aaPredicted RBP22.45■■□□□ 1.18
LSM6-206ENST00000510331 LACTBP83111 547 aaPredicted RBP22.45■■□□□ 1.18
LSM6-206ENST00000510331 SPP2Q13103 211 aa22.45■■□□□ 1.18
LSM6-206ENST00000510331 TREML2Q5T2D2 321 aa22.45■■□□□ 1.18
LSM6-206ENST00000510331 FASTKD5Q7L8L6 764 aaKnown RBP22.45■■□□□ 1.18
LSM6-206ENST00000510331 FOXP4Q8IVH2 680 aaPredicted RBP22.45■■□□□ 1.18
LSM6-206ENST00000510331 ZNF280CQ8ND82 737 aa22.45■■□□□ 1.18
LSM6-206ENST00000510331 OTUD7AQ8TE49 926 aaPredicted RBP22.45■■□□□ 1.18
LSM6-206ENST00000510331 GPATCH3Q96I76 525 aa22.45■■□□□ 1.18
LSM6-206ENST00000510331 ZBTB21Q9ULJ3 1066 aa22.45■■□□□ 1.18
LSM6-206ENST00000510331 USP17L5A8MUK1 530 aa22.44■■□□□ 1.18
LSM6-206ENST00000510331 C17orf99Q6UX52 265 aa22.44■■□□□ 1.18
LSM6-206ENST00000510331 EHD4Q9H223 541 aa22.44■■□□□ 1.18
LSM6-206ENST00000510331 SERPINB13Q9UIV8 391 aa22.44■■□□□ 1.18
LSM6-206ENST00000510331 PTPN22Q9Y2R2 807 aa22.44■■□□□ 1.18
LSM6-206ENST00000510331 ASNSP08243 561 aa22.43■■□□□ 1.18
LSM6-206ENST00000510331 HMGCS2P54868 508 aa22.43■■□□□ 1.18
LSM6-206ENST00000510331 AGTPBP1Q9UPW5 1226 aa22.43■■□□□ 1.18
LSM6-206ENST00000510331 BRCA2P51587 3418 aa22.42■■□□□ 1.18
LSM6-206ENST00000510331 PRKAB2O43741 272 aa22.42■■□□□ 1.18
LSM6-206ENST00000510331 CTGFP29279 349 aa22.42■■□□□ 1.18
LSM6-206ENST00000510331 PLCD1P51178 756 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms