RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 VPS33BQ9H267 617 aa5.88□□□□□ -1.47
PHF3-210ENST00000509876 MRPL11Q9Y3B7 192 aaKnown RBP5.88□□□□□ -1.47
PHF3-210ENST00000509876 LIG1P18858 919 aa5.88□□□□□ -1.47
PHF3-210ENST00000509876 FOXO4P98177 505 aa5.88□□□□□ -1.47
PHF3-210ENST00000509876 FAM47AQ5JRC9 791 aa5.88□□□□□ -1.47
PHF3-210ENST00000509876 NSMFQ6X4W1 530 aa5.88□□□□□ -1.47
PHF3-210ENST00000509876 DESP17661 470 aa5.88□□□□□ -1.47
PHF3-210ENST00000509876 APOBRQ0VD83 1088 aa5.88□□□□□ -1.47
PHF3-210ENST00000509876 RASGRF1Q13972 1273 aa5.88□□□□□ -1.47
PHF3-210ENST00000509876 PDCL3Q9H2J4 239 aa5.88□□□□□ -1.47
PHF3-210ENST00000509876 ZSCAN16Q9H4T2 348 aaPredicted RBP5.88□□□□□ -1.47
PHF3-210ENST00000509876 KANSL2Q9H9L4 492 aa5.88□□□□□ -1.47
PHF3-210ENST00000509876 HOMER2Q9NSB8 354 aa5.88□□□□□ -1.47
PHF3-210ENST00000509876 PARP4Q9UKK3 1724 aaKnown RBP5.88□□□□□ -1.47
PHF3-210ENST00000509876 BACH1O14867 736 aa5.87□□□□□ -1.47
PHF3-210ENST00000509876 ADD2P35612 726 aa5.87□□□□□ -1.47
PHF3-210ENST00000509876 CHST3Q7LGC8 479 aa5.87□□□□□ -1.47
PHF3-210ENST00000509876 TICAM2Q86XR7 235 aa5.87□□□□□ -1.47
PHF3-210ENST00000509876 SERPINB13Q9UIV8 391 aa5.87□□□□□ -1.47
PHF3-210ENST00000509876 ZEB2O60315 1214 aa5.87□□□□□ -1.47
PHF3-210ENST00000509876 DEXIO95424 95 aa5.87□□□□□ -1.47
PHF3-210ENST00000509876 MYCLP12524 364 aaPredicted RBP5.87□□□□□ -1.47
PHF3-210ENST00000509876 RPS6KB1P23443 525 aa5.87□□□□□ -1.47
PHF3-210ENST00000509876 HOXD10P28358 340 aa5.87□□□□□ -1.47
PHF3-210ENST00000509876 UBA7P41226 1012 aa5.87□□□□□ -1.47
PHF3-210ENST00000509876 SLFN13Q68D06 897 aa5.87□□□□□ -1.47
PHF3-210ENST00000509876 DPP9Q86TI2 863 aa5.87□□□□□ -1.47
PHF3-210ENST00000509876 OTUD7AQ8TE49 926 aaPredicted RBP5.87□□□□□ -1.47
PHF3-210ENST00000509876 UBA5Q9GZZ9 404 aa5.87□□□□□ -1.47
PHF3-210ENST00000509876 TNMDQ9H2S6 317 aa5.87□□□□□ -1.47
PHF3-210ENST00000509876 POLRMTO00411 1230 aaKnown RBP5.87□□□□□ -1.47
PHF3-210ENST00000509876 PRPF40AO75400 957 aaKnown RBP5.87□□□□□ -1.47
PHF3-210ENST00000509876 TTLL1O95922 423 aa5.87□□□□□ -1.47
PHF3-210ENST00000509876 MKRN3Q13064 507 aaKnown RBP5.87□□□□□ -1.47
PHF3-210ENST00000509876 ZNF827Q17R98 1081 aa5.87□□□□□ -1.47
PHF3-210ENST00000509876 AGBL3Q8NEM8 1001 aa5.87□□□□□ -1.47
PHF3-210ENST00000509876 BICD1Q96G01 975 aa5.87□□□□□ -1.47
PHF3-210ENST00000509876 FHDC1Q9C0D6 1143 aaPredicted RBP5.87□□□□□ -1.47
PHF3-210ENST00000509876 MED23Q9ULK4 1368 aa5.87□□□□□ -1.47
PHF3-210ENST00000509876 MROH7-TTC4A0A0A0MT08 1334 aa5.87□□□□□ -1.47
PHF3-210ENST00000509876 FGFR1OPO95684 399 aaKnown RBP5.87□□□□□ -1.47
PHF3-210ENST00000509876 DHX8Q14562 1220 aaKnown RBP5.87□□□□□ -1.47
PHF3-210ENST00000509876 GNPTABQ3T906 1256 aa5.87□□□□□ -1.47
PHF3-210ENST00000509876 USH1GQ495M9 461 aa5.87□□□□□ -1.47
PHF3-210ENST00000509876 ANKRD35Q8N283 1001 aa5.87□□□□□ -1.47
PHF3-210ENST00000509876 SGSM2O43147 1006 aa5.87□□□□□ -1.47
PHF3-210ENST00000509876 GMPSP49915 693 aaPredicted RBP5.87□□□□□ -1.47
PHF3-210ENST00000509876 AZI2Q9H6S1 392 aa5.87□□□□□ -1.47
PHF3-210ENST00000509876 EPB41L2O43491 1005 aaKnown RBP5.87□□□□□ -1.47
PHF3-210ENST00000509876 CNGA1P29973 690 aa5.87□□□□□ -1.47
PHF3-210ENST00000509876 MTX1Q13505 466 aa5.87□□□□□ -1.47
PHF3-210ENST00000509876 DIXDC1Q155Q3 683 aa5.87□□□□□ -1.47
PHF3-210ENST00000509876 ARHGEF16Q5VV41 709 aa5.87□□□□□ -1.47
PHF3-210ENST00000509876 MIGA2Q7L4E1 593 aa5.87□□□□□ -1.47
PHF3-210ENST00000509876 FCHSD1Q86WN1 690 aa5.87□□□□□ -1.47
PHF3-210ENST00000509876 TRIM75PA6NK02 468 aa5.86□□□□□ -1.47
PHF3-210ENST00000509876 PSMD14O00487 310 aa5.86□□□□□ -1.47
PHF3-210ENST00000509876 DDAH1O94760 285 aa5.86□□□□□ -1.47
PHF3-210ENST00000509876 GDF11O95390 407 aa5.86□□□□□ -1.47
PHF3-210ENST00000509876 ASNSP08243 561 aa5.86□□□□□ -1.47
PHF3-210ENST00000509876 DYNLL1P63167 89 aaKnown RBP5.86□□□□□ -1.47
PHF3-210ENST00000509876 SLC10A5Q5PT55 438 aa5.86□□□□□ -1.47
PHF3-210ENST00000509876 ABCC12Q96J65 1359 aa5.86□□□□□ -1.47
PHF3-210ENST00000509876 M0QZ92 97 aa5.86□□□□□ -1.47
PHF3-210ENST00000509876 SCARF1Q14162 830 aa5.86□□□□□ -1.47
PHF3-210ENST00000509876 FERMT3Q86UX7 667 aa5.86□□□□□ -1.47
PHF3-210ENST00000509876 WRNIP1Q96S55 665 aa5.86□□□□□ -1.47
PHF3-210ENST00000509876 LARP6Q9BRS8 491 aaKnown RBP5.86□□□□□ -1.47
PHF3-210ENST00000509876 PRM3Q9NNZ6 103 aa5.86□□□□□ -1.47
PHF3-210ENST00000509876 PIK3C2AO00443 1686 aa5.86□□□□□ -1.47
PHF3-210ENST00000509876 ALAS1P13196 640 aa5.86□□□□□ -1.47
PHF3-210ENST00000509876 PDE4DQ08499 809 aa5.86□□□□□ -1.47
PHF3-210ENST00000509876 EPHA10Q5JZY3 1008 aa5.86□□□□□ -1.47
PHF3-210ENST00000509876 ZMYM1Q5SVZ6 1142 aa5.86□□□□□ -1.47
PHF3-210ENST00000509876 SMARCE1Q969G3 411 aa5.86□□□□□ -1.47
PHF3-210ENST00000509876 DRC1Q96MC2 740 aa5.86□□□□□ -1.47
PHF3-210ENST00000509876 ADARB2Q9NS39 739 aaKnown RBP5.86□□□□□ -1.47
PHF3-210ENST00000509876 TLR7Q9NYK1 1049 aaKnown RBP5.86□□□□□ -1.47
PHF3-210ENST00000509876 SLIT2O94813 1529 aa5.86□□□□□ -1.47
PHF3-210ENST00000509876 COL3A1P02461 1466 aaPredicted RBP5.86□□□□□ -1.47
PHF3-210ENST00000509876 NFAT5O94916 1531 aa5.86□□□□□ -1.47
PHF3-210ENST00000509876 TMEM232C9JQI7 657 aa5.86□□□□□ -1.47
PHF3-210ENST00000509876 CA8P35219 290 aa5.86□□□□□ -1.47
PHF3-210ENST00000509876 KANK3Q6NY19 840 aa5.86□□□□□ -1.47
PHF3-210ENST00000509876 TRMT1LQ7Z2T5 733 aaKnown RBP5.86□□□□□ -1.47
PHF3-210ENST00000509876 SYCP3Q8IZU3 236 aa5.86□□□□□ -1.47
PHF3-210ENST00000509876 LRRC47Q8N1G4 583 aaKnown RBP5.86□□□□□ -1.47
PHF3-210ENST00000509876 UPF1Q92900 1129 aaKnown RBP eCLIP5.86□□□□□ -1.47
PHF3-210ENST00000509876 TDRD3Q9H7E2 651 aaKnown RBP5.86□□□□□ -1.47
PHF3-210ENST00000509876 PALD1Q9ULE6 856 aa5.86□□□□□ -1.47
PHF3-210ENST00000509876 USP17L5A8MUK1 530 aa5.86□□□□□ -1.47
PHF3-210ENST00000509876 GCOM1H8Y6P7 765 aaPredicted RBP5.86□□□□□ -1.47
PHF3-210ENST00000509876 FMNL1O95466 1100 aaPredicted RBP5.86□□□□□ -1.47
PHF3-210ENST00000509876 POLR2MP0CAP2 368 aa5.86□□□□□ -1.47
PHF3-210ENST00000509876 ECE1P42892 770 aa5.86□□□□□ -1.47
PHF3-210ENST00000509876 SREBF2Q12772 1141 aa5.86□□□□□ -1.47
PHF3-210ENST00000509876 TCEANC2Q96MN5 208 aa5.86□□□□□ -1.47
PHF3-210ENST00000509876 PNPLA7Q6ZV29 1317 aa5.86□□□□□ -1.47
PHF3-210ENST00000509876 CSF1RP07333 972 aa5.86□□□□□ -1.47
PHF3-210ENST00000509876 POTEJP0CG39 1038 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms