RNA–Protein interactions for RNA: ENST00000509477.1

CLGN-203, Transcript of calmegin, humanhuman

TSL 3

Gene CLGN, Length 706 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLGN-203ENST00000509477 ERVK-9P63128 1117 aa8.22□□□□□ -1.09
CLGN-203ENST00000509477 GTF2IP78347 998 aa8.22□□□□□ -1.09
CLGN-203ENST00000509477 PRKG1Q13976 671 aa8.22□□□□□ -1.09
CLGN-203ENST00000509477 OGFOD1Q8N543 542 aa8.22□□□□□ -1.09
CLGN-203ENST00000509477 COL25A1Q9BXS0 654 aaPredicted RBP8.22□□□□□ -1.09
CLGN-203ENST00000509477 DNAAF2Q9NVR5 837 aaKnown RBP8.22□□□□□ -1.09
CLGN-203ENST00000509477 NSFL1CQ9UNZ2 370 aaKnown RBP8.22□□□□□ -1.09
CLGN-203ENST00000509477 SCAF8Q9UPN6 1271 aaKnown RBP8.22□□□□□ -1.09
CLGN-203ENST00000509477 IBTKQ9P2D0 1353 aaPredicted RBP8.22□□□□□ -1.09
CLGN-203ENST00000509477 POLR2AP24928 1970 aaKnown RBP8.21□□□□□ -1.09
CLGN-203ENST00000509477 SIPA1L3O60292 1781 aaPredicted RBP8.21□□□□□ -1.1
CLGN-203ENST00000509477 RBM47A0AV96 593 aaKnown RBP8.21□□□□□ -1.1
CLGN-203ENST00000509477 U2SURPO15042 1029 aaKnown RBP8.21□□□□□ -1.1
CLGN-203ENST00000509477 DIAPH1O60610 1272 aaKnown RBP8.21□□□□□ -1.1
CLGN-203ENST00000509477 ZIC2O95409 532 aaPredicted RBP8.21□□□□□ -1.1
CLGN-203ENST00000509477 ERCC3P19447 782 aa8.21□□□□□ -1.1
CLGN-203ENST00000509477 WDR4P57081 412 aaKnown RBP8.21□□□□□ -1.1
CLGN-203ENST00000509477 ARHGEF6Q15052 776 aa8.21□□□□□ -1.1
CLGN-203ENST00000509477 PRAMEF18Q5VWM3 479 aa8.21□□□□□ -1.1
CLGN-203ENST00000509477 ARMC9Q7Z3E5 817 aa8.21□□□□□ -1.1
CLGN-203ENST00000509477 CCER1Q8TC90 406 aaPredicted RBP8.21□□□□□ -1.1
CLGN-203ENST00000509477 HPS1Q92902 700 aa8.21□□□□□ -1.1
CLGN-203ENST00000509477 ZNF333Q96JL9 665 aa8.21□□□□□ -1.1
CLGN-203ENST00000509477 EYA3Q99504 573 aa8.21□□□□□ -1.1
CLGN-203ENST00000509477 PANK3Q9H999 370 aa8.21□□□□□ -1.1
CLGN-203ENST00000509477 RRP7AQ9Y3A4 280 aaKnown RBP8.21□□□□□ -1.1
CLGN-203ENST00000509477 MAP3K15Q6ZN16 1313 aa8.21□□□□□ -1.1
CLGN-203ENST00000509477 UBN2Q6ZU65 1347 aa8.21□□□□□ -1.1
CLGN-203ENST00000509477 MANSC4A6NHS7 340 aaPredicted RBP8.2□□□□□ -1.1
CLGN-203ENST00000509477 FAM196BA6NMK8 535 aa8.2□□□□□ -1.1
CLGN-203ENST00000509477 USP17L15C9J2P7 530 aa8.2□□□□□ -1.1
CLGN-203ENST00000509477 USP17L10C9JJH3 530 aa8.2□□□□□ -1.1
CLGN-203ENST00000509477 USP17L13C9JLJ4 530 aa8.2□□□□□ -1.1
CLGN-203ENST00000509477 USP17L12C9JPN9 530 aa8.2□□□□□ -1.1
CLGN-203ENST00000509477 USP17L11C9JVI0 530 aa8.2□□□□□ -1.1
CLGN-203ENST00000509477 USP17L21D6R901 530 aa8.2□□□□□ -1.1
CLGN-203ENST00000509477 USP17L18D6R9N7 530 aa8.2□□□□□ -1.1
CLGN-203ENST00000509477 USP17L22D6RA61 530 aa8.2□□□□□ -1.1
CLGN-203ENST00000509477 USP17L17D6RBQ6 530 aa8.2□□□□□ -1.1
CLGN-203ENST00000509477 USP17L19D6RCP7 530 aa8.2□□□□□ -1.1
CLGN-203ENST00000509477 USP17L20D6RJB6 530 aa8.2□□□□□ -1.1
CLGN-203ENST00000509477 LILRA1O75019 489 aa8.2□□□□□ -1.1
CLGN-203ENST00000509477 NTSR2O95665 410 aa8.2□□□□□ -1.1
CLGN-203ENST00000509477 MYL6BP14649 208 aa8.2□□□□□ -1.1
CLGN-203ENST00000509477 INHBEP58166 350 aa8.2□□□□□ -1.1
CLGN-203ENST00000509477 CLDN10P78369 228 aa8.2□□□□□ -1.1
CLGN-203ENST00000509477 USP17L24Q0WX57 530 aa8.2□□□□□ -1.1
CLGN-203ENST00000509477 CRTC2Q53ET0 693 aaPredicted RBP8.2□□□□□ -1.1
CLGN-203ENST00000509477 OTUD7BQ6GQQ9 843 aa8.2□□□□□ -1.1
CLGN-203ENST00000509477 RTF1Q92541 710 aaKnown RBP8.2□□□□□ -1.1
CLGN-203ENST00000509477 ITPKCQ96DU7 683 aa8.2□□□□□ -1.1
CLGN-203ENST00000509477 ZNF594Q96JF6 807 aaPredicted RBP8.2□□□□□ -1.1
CLGN-203ENST00000509477 HTATIP2Q9BUP3 242 aa8.2□□□□□ -1.1
CLGN-203ENST00000509477 UTP14AQ9BVJ6 771 aaKnown RBP8.2□□□□□ -1.1
CLGN-203ENST00000509477 KCNQ5Q9NR82 932 aa8.2□□□□□ -1.1
CLGN-203ENST00000509477 RBM19Q9Y4C8 960 aaKnown RBP8.2□□□□□ -1.1
CLGN-203ENST00000509477 PCDHGA11Q9Y5H2 935 aa8.2□□□□□ -1.1
CLGN-203ENST00000509477 NR2E3Q9Y5X4 410 aa8.2□□□□□ -1.1
CLGN-203ENST00000509477 BRCA2P51587 3418 aa8.2□□□□□ -1.1
CLGN-203ENST00000509477 ZNF609O15014 1411 aa8.2□□□□□ -1.1
CLGN-203ENST00000509477 WTIPA6NIX2 430 aaPredicted RBP8.19□□□□□ -1.1
CLGN-203ENST00000509477 HSP90B1P14625 803 aaKnown RBP8.19□□□□□ -1.1
CLGN-203ENST00000509477 ADD1P35611 737 aaKnown RBP8.19□□□□□ -1.1
CLGN-203ENST00000509477 SP3Q02447 781 aa8.19□□□□□ -1.1
CLGN-203ENST00000509477 PTK7Q13308 1070 aa8.19□□□□□ -1.1
CLGN-203ENST00000509477 GRAPQ13588 217 aa8.19□□□□□ -1.1
CLGN-203ENST00000509477 PARP10Q53GL7 1025 aa8.19□□□□□ -1.1
CLGN-203ENST00000509477 TMC4Q7Z404 712 aa8.19□□□□□ -1.1
CLGN-203ENST00000509477 GRAPLQ8TC17 118 aaPredicted RBP8.19□□□□□ -1.1
CLGN-203ENST00000509477 KLF16Q9BXK1 252 aaPredicted RBP8.19□□□□□ -1.1
CLGN-203ENST00000509477 ZC3H12CQ9C0D7 883 aaKnown RBP8.19□□□□□ -1.1
CLGN-203ENST00000509477 OSBPL3Q9H4L5 887 aa8.19□□□□□ -1.1
CLGN-203ENST00000509477 MYOZ2Q9NPC6 264 aa8.19□□□□□ -1.1
CLGN-203ENST00000509477 NOVA2Q9UNW9 492 aaKnown RBP8.19□□□□□ -1.1
CLGN-203ENST00000509477 KNSTRNQ9Y448 316 aa8.19□□□□□ -1.1
CLGN-203ENST00000509477 CENPFP49454 3210 aa8.18□□□□□ -1.1
CLGN-203ENST00000509477 NUP98P52948 1817 aa8.18□□□□□ -1.1
CLGN-203ENST00000509477 SOX1O00570 391 aaPredicted RBP8.18□□□□□ -1.1
CLGN-203ENST00000509477 ZBTB7BO15156 539 aaPredicted RBP8.18□□□□□ -1.1
CLGN-203ENST00000509477 PTPN12Q05209 780 aaKnown RBP8.18□□□□□ -1.1
CLGN-203ENST00000509477 CRHR2Q13324 411 aa8.18□□□□□ -1.1
CLGN-203ENST00000509477 ELOAQ14241 798 aaKnown RBP8.18□□□□□ -1.1
CLGN-203ENST00000509477 CCDC102BQ68D86 513 aa8.18□□□□□ -1.1
CLGN-203ENST00000509477 TTLL7Q6ZT98 887 aa8.18□□□□□ -1.1
CLGN-203ENST00000509477 ZNF34Q8IZ26 560 aa8.18□□□□□ -1.1
CLGN-203ENST00000509477 DEFB123Q8N688 67 aa8.18□□□□□ -1.1
CLGN-203ENST00000509477 ZFAND3Q9H8U3 227 aa8.18□□□□□ -1.1
CLGN-203ENST00000509477 ANGEL1Q9UNK9 670 aaKnown RBP8.18□□□□□ -1.1
CLGN-203ENST00000509477 PTCH2Q9Y6C5 1203 aa8.18□□□□□ -1.1
CLGN-203ENST00000509477 RTL9Q8NET4 1388 aa8.18□□□□□ -1.1
CLGN-203ENST00000509477 DDX60Q8IY21 1712 aaKnown RBP8.17□□□□□ -1.1
CLGN-203ENST00000509477 A0A1W2PPC1 479 aa8.17□□□□□ -1.1
CLGN-203ENST00000509477 VIL1P09327 827 aaKnown RBP8.17□□□□□ -1.1
CLGN-203ENST00000509477 HCLS1P14317 486 aaPredicted RBP8.17□□□□□ -1.1
CLGN-203ENST00000509477 TIMP2P16035 220 aa8.17□□□□□ -1.1
CLGN-203ENST00000509477 CBLBQ13191 982 aa8.17□□□□□ -1.1
CLGN-203ENST00000509477 TREML4Q6UXN2 200 aa8.17□□□□□ -1.1
CLGN-203ENST00000509477 CYP2U1Q7Z449 544 aa8.17□□□□□ -1.1
CLGN-203ENST00000509477 ANKMY2Q8IV38 441 aa8.17□□□□□ -1.1
CLGN-203ENST00000509477 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms