RNA–Protein interactions for RNA: ENST00000509420.5

SDHA-210, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 580 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-210ENST00000509420 ZSCAN29Q8IWY8 852 aaPredicted RBP16.37■□□□□ 0.21
SDHA-210ENST00000509420 TEX11Q8IYF3 940 aa16.37■□□□□ 0.21
SDHA-210ENST00000509420 AATFQ9NY61 560 aaKnown RBP eCLIP16.37■□□□□ 0.21
SDHA-210ENST00000509420 LRP2BPQ9P2M1 347 aa16.37■□□□□ 0.21
SDHA-210ENST00000509420 FLT1P17948 1338 aa16.37■□□□□ 0.21
SDHA-210ENST00000509420 DYNLL1P63167 89 aaKnown RBP16.36■□□□□ 0.21
SDHA-210ENST00000509420 CCDC158Q5M9N0 1113 aa16.36■□□□□ 0.21
SDHA-210ENST00000509420 NAA16Q6N069 864 aaPredicted RBP16.36■□□□□ 0.21
SDHA-210ENST00000509420 COG6Q9Y2V7 657 aa16.36■□□□□ 0.21
SDHA-210ENST00000509420 MYH1P12882 1939 aa16.35■□□□□ 0.21
SDHA-210ENST00000509420 TREML2Q5T2D2 321 aa16.35■□□□□ 0.21
SDHA-210ENST00000509420 DOCK3Q8IZD9 2030 aa16.35■□□□□ 0.21
SDHA-210ENST00000509420 CAP2P40123 477 aa16.34■□□□□ 0.21
SDHA-210ENST00000509420 MAPKAPK5Q8IW41 473 aa16.34■□□□□ 0.21
SDHA-210ENST00000509420 RHPN1Q8TCX5 695 aa16.34■□□□□ 0.21
SDHA-210ENST00000509420 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.34■□□□□ 0.21
SDHA-210ENST00000509420 IL1RAPL2Q9NP60 686 aa16.34■□□□□ 0.21
SDHA-210ENST00000509420 RANBP2P49792 3224 aaKnown RBP16.33■□□□□ 0.21
SDHA-210ENST00000509420 TRIM75PA6NK02 468 aa16.33■□□□□ 0.2
SDHA-210ENST00000509420 OSBPP22059 807 aa16.33■□□□□ 0.2
SDHA-210ENST00000509420 AACSQ86V21 672 aa16.33■□□□□ 0.2
SDHA-210ENST00000509420 TGFBRAP1Q8WUH2 860 aa16.33■□□□□ 0.2
SDHA-210ENST00000509420 PICK1Q9NRD5 415 aa16.33■□□□□ 0.2
SDHA-210ENST00000509420 RCAN3Q9UKA8 241 aa16.33■□□□□ 0.2
SDHA-210ENST00000509420 SLC45A1Q9Y2W3 748 aa16.33■□□□□ 0.2
SDHA-210ENST00000509420 PLXNB2O15031 1838 aa16.32■□□□□ 0.2
SDHA-210ENST00000509420 CEP290O15078 2479 aa16.32■□□□□ 0.2
SDHA-210ENST00000509420 IGSF3O75054 1194 aa16.32■□□□□ 0.2
SDHA-210ENST00000509420 EN2P19622 333 aaPredicted RBP16.32■□□□□ 0.2
SDHA-210ENST00000509420 SH3TC2Q8TF17 1288 aa16.32■□□□□ 0.2
SDHA-210ENST00000509420 RIOK1Q9BRS2 568 aaKnown RBP16.32■□□□□ 0.2
SDHA-210ENST00000509420 HERC5Q9UII4 1024 aaKnown RBP16.32■□□□□ 0.2
SDHA-210ENST00000509420 PALD1Q9ULE6 856 aa16.32■□□□□ 0.2
SDHA-210ENST00000509420 NAV1Q8NEY1 1877 aa16.31■□□□□ 0.2
SDHA-210ENST00000509420 ECM2O94769 699 aaPredicted RBP16.31■□□□□ 0.2
SDHA-210ENST00000509420 CYP7A1P22680 504 aa16.31■□□□□ 0.2
SDHA-210ENST00000509420 PSMC4P43686 418 aa16.31■□□□□ 0.2
SDHA-210ENST00000509420 EVX2Q03828 476 aa16.31■□□□□ 0.2
SDHA-210ENST00000509420 POTEEQ6S8J3 1075 aa16.31■□□□□ 0.2
SDHA-210ENST00000509420 GADL1Q6ZQY3 521 aa16.31■□□□□ 0.2
SDHA-210ENST00000509420 FASTKD5Q7L8L6 764 aaKnown RBP16.31■□□□□ 0.2
SDHA-210ENST00000509420 RPAP2Q8IXW5 612 aaPredicted RBP16.31■□□□□ 0.2
SDHA-210ENST00000509420 MIGA1Q8NAN2 632 aa16.31■□□□□ 0.2
SDHA-210ENST00000509420 PARK7Q99497 189 aaKnown RBP16.31■□□□□ 0.2
SDHA-210ENST00000509420 PI4KBQ9UBF8 816 aa16.31■□□□□ 0.2
SDHA-210ENST00000509420 SRRDQ9UH36 339 aa16.31■□□□□ 0.2
SDHA-210ENST00000509420 DDX19BQ9UMR2 479 aa16.31■□□□□ 0.2
SDHA-210ENST00000509420 AGTPBP1Q9UPW5 1226 aa16.31■□□□□ 0.2
SDHA-210ENST00000509420 TCRBV5S4A2TA0A5A2 114 aa16.3■□□□□ 0.2
SDHA-210ENST00000509420 GNRH1P01148 92 aa16.3■□□□□ 0.2
SDHA-210ENST00000509420 SPP2Q13103 211 aa16.3■□□□□ 0.2
SDHA-210ENST00000509420 SH3D19Q5HYK7 790 aa16.3■□□□□ 0.2
SDHA-210ENST00000509420 ERC1Q8IUD2 1116 aa16.3■□□□□ 0.2
SDHA-210ENST00000509420 MAGEB6Q8N7X4 407 aa16.3■□□□□ 0.2
SDHA-210ENST00000509420 DHX36Q9H2U1 1008 aaKnown RBP16.3■□□□□ 0.2
SDHA-210ENST00000509420 GABRQQ9UN88 632 aa16.3■□□□□ 0.2
SDHA-210ENST00000509420 IDH1O75874 414 aaKnown RBP16.29■□□□□ 0.2
SDHA-210ENST00000509420 BAG3O95817 575 aa16.29■□□□□ 0.2
SDHA-210ENST00000509420 PLCG2P16885 1265 aa16.29■□□□□ 0.2
SDHA-210ENST00000509420 HMGCS2P54868 508 aa16.29■□□□□ 0.2
SDHA-210ENST00000509420 PRKCZQ05513 592 aa16.29■□□□□ 0.2
SDHA-210ENST00000509420 SLC9C1Q4G0N8 1177 aa16.29■□□□□ 0.2
SDHA-210ENST00000509420 PROCA1Q8NCQ7 364 aaPredicted RBP16.29■□□□□ 0.2
SDHA-210ENST00000509420 ZNF280CQ8ND82 737 aa16.29■□□□□ 0.2
SDHA-210ENST00000509420 SHISA4Q96DD7 197 aa16.29■□□□□ 0.2
SDHA-210ENST00000509420 EDC3Q96F86 508 aaKnown RBP16.29■□□□□ 0.2
SDHA-210ENST00000509420 WDR18Q9BV38 432 aa16.29■□□□□ 0.2
SDHA-210ENST00000509420 SAP30BPQ9UHR5 308 aaKnown RBP16.29■□□□□ 0.2
SDHA-210ENST00000509420 CHGBP05060 677 aa16.28■□□□□ 0.2
SDHA-210ENST00000509420 MTFR1Q15390 333 aa16.28■□□□□ 0.2
SDHA-210ENST00000509420 SLC4A8Q2Y0W8 1093 aa16.28■□□□□ 0.2
SDHA-210ENST00000509420 SLFNL1Q499Z3 407 aa16.28■□□□□ 0.2
SDHA-210ENST00000509420 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.28■□□□□ 0.2
SDHA-210ENST00000509420 USP17L5A8MUK1 530 aa16.27■□□□□ 0.2
SDHA-210ENST00000509420 APBB1O00213 710 aa16.27■□□□□ 0.2
SDHA-210ENST00000509420 GDF11O95390 407 aa16.27■□□□□ 0.2
SDHA-210ENST00000509420 MS4A1P11836 297 aa16.27■□□□□ 0.2
SDHA-210ENST00000509420 PDE6AP16499 860 aa16.27■□□□□ 0.2
SDHA-210ENST00000509420 PRMT2P55345 433 aa16.27■□□□□ 0.2
SDHA-210ENST00000509420 PRPF38BQ5VTL8 546 aaKnown RBP16.27■□□□□ 0.2
SDHA-210ENST00000509420 TATDN1Q6P1N9 297 aa16.27■□□□□ 0.2
SDHA-210ENST00000509420 KIF1BPQ96EK5 621 aa16.27■□□□□ 0.2
SDHA-210ENST00000509420 ZBTB21Q9ULJ3 1066 aa16.27■□□□□ 0.2
SDHA-210ENST00000509420 MYH7P12883 1935 aa16.27■□□□□ 0.19
SDHA-210ENST00000509420 MYPNQ86TC9 1320 aa16.26■□□□□ 0.19
SDHA-210ENST00000509420 PEX10O60683 326 aa16.26■□□□□ 0.19
SDHA-210ENST00000509420 SLC34A2O95436 690 aa16.26■□□□□ 0.19
SDHA-210ENST00000509420 PDE3AQ14432 1141 aa16.26■□□□□ 0.19
SDHA-210ENST00000509420 KIF22Q14807 665 aa16.26■□□□□ 0.19
SDHA-210ENST00000509420 ARHGEF6Q15052 776 aa16.26■□□□□ 0.19
SDHA-210ENST00000509420 HSP90AB4PQ58FF6 505 aa16.26■□□□□ 0.19
SDHA-210ENST00000509420 FOXP4Q8IVH2 680 aaPredicted RBP16.26■□□□□ 0.19
SDHA-210ENST00000509420 FMNL1O95466 1100 aaPredicted RBP16.25■□□□□ 0.19
SDHA-210ENST00000509420 MYCP01106 439 aaPredicted RBP16.25■□□□□ 0.19
SDHA-210ENST00000509420 PLCD1P51178 756 aa16.25■□□□□ 0.19
SDHA-210ENST00000509420 BACE1P56817 501 aa16.25■□□□□ 0.19
SDHA-210ENST00000509420 GABPAQ06546 454 aa16.25■□□□□ 0.19
SDHA-210ENST00000509420 MTMR2Q13614 643 aa16.25■□□□□ 0.19
SDHA-210ENST00000509420 UBE2Q1Q7Z7E8 422 aa16.25■□□□□ 0.19
SDHA-210ENST00000509420 NOL10Q9BSC4 688 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms