RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 CCDC173Q0VFZ6 552 aa17.31■□□□□ 0.36
PHF3-209ENST00000509330 DOK7Q18PE1 504 aa17.31■□□□□ 0.36
PHF3-209ENST00000509330 MYSM1Q5VVJ2 828 aa17.31■□□□□ 0.36
PHF3-209ENST00000509330 USP25Q9UHP3 1055 aa17.31■□□□□ 0.36
PHF3-209ENST00000509330 GTF2IP78347 998 aa17.3■□□□□ 0.36
PHF3-209ENST00000509330 MAP3K11Q16584 847 aa17.3■□□□□ 0.36
PHF3-209ENST00000509330 SPTY2D1Q68D10 685 aaPredicted RBP17.3■□□□□ 0.36
PHF3-209ENST00000509330 CHD4Q14839 1912 aa17.3■□□□□ 0.36
PHF3-209ENST00000509330 A0A1B0GVL5 298 aa17.3■□□□□ 0.36
PHF3-209ENST00000509330 TRIM29Q14134 588 aa17.3■□□□□ 0.36
PHF3-209ENST00000509330 FANCBQ8NB91 859 aa17.3■□□□□ 0.36
PHF3-209ENST00000509330 TSPY2A6NKD2 308 aa17.29■□□□□ 0.36
PHF3-209ENST00000509330 ATP2B4P23634 1241 aa17.29■□□□□ 0.36
PHF3-209ENST00000509330 PCDHA7Q9UN72 937 aa17.29■□□□□ 0.36
PHF3-209ENST00000509330 MYH2Q9UKX2 1941 aa17.29■□□□□ 0.36
PHF3-209ENST00000509330 PLEKHA8P1O95397 391 aa17.29■□□□□ 0.36
PHF3-209ENST00000509330 SEC23AQ15436 765 aa17.29■□□□□ 0.36
PHF3-209ENST00000509330 IQCA1Q86XH1 822 aa17.29■□□□□ 0.36
PHF3-209ENST00000509330 FSIP1Q8NA03 581 aa17.29■□□□□ 0.36
PHF3-209ENST00000509330 AKT1S1Q96B36 256 aa17.29■□□□□ 0.36
PHF3-209ENST00000509330 ANAPC4Q9UJX5 808 aa17.29■□□□□ 0.36
PHF3-209ENST00000509330 RCOR1Q9UKL0 485 aa17.29■□□□□ 0.36
PHF3-209ENST00000509330 BBOX1O75936 387 aa17.28■□□□□ 0.36
PHF3-209ENST00000509330 BTDP43251 543 aa17.28■□□□□ 0.36
PHF3-209ENST00000509330 BAZ2BQ9UIF8 2168 aaKnown RBP17.28■□□□□ 0.36
PHF3-209ENST00000509330 BTBD18B2RXH4 712 aa17.28■□□□□ 0.36
PHF3-209ENST00000509330 NLGN1Q8N2Q7 840 aa17.28■□□□□ 0.36
PHF3-209ENST00000509330 NOL10Q9BSC4 688 aaKnown RBP17.28■□□□□ 0.36
PHF3-209ENST00000509330 PLCD1P51178 756 aa17.27■□□□□ 0.36
PHF3-209ENST00000509330 TRIM22Q8IYM9 498 aa17.27■□□□□ 0.36
PHF3-209ENST00000509330 ATP8A2Q9NTI2 1148 aa17.27■□□□□ 0.36
PHF3-209ENST00000509330 PARP3Q9Y6F1 533 aa17.27■□□□□ 0.36
PHF3-209ENST00000509330 LETM1O95202 739 aaPredicted RBP17.27■□□□□ 0.35
PHF3-209ENST00000509330 FMNL1O95466 1100 aaPredicted RBP17.27■□□□□ 0.35
PHF3-209ENST00000509330 EN1Q05925 392 aaPredicted RBP17.27■□□□□ 0.35
PHF3-209ENST00000509330 NR5A1Q13285 461 aa17.27■□□□□ 0.35
PHF3-209ENST00000509330 LINC00301Q8NCQ3 95 aa17.27■□□□□ 0.35
PHF3-209ENST00000509330 FUCA2Q9BTY2 467 aa17.27■□□□□ 0.35
PHF3-209ENST00000509330 TIAM2Q8IVF5 1701 aa17.26■□□□□ 0.35
PHF3-209ENST00000509330 SRGNP10124 158 aa17.26■□□□□ 0.35
PHF3-209ENST00000509330 IFNAR1P17181 557 aa17.26■□□□□ 0.35
PHF3-209ENST00000509330 TYRO3Q06418 890 aa17.26■□□□□ 0.35
PHF3-209ENST00000509330 CCDC73Q6ZRK6 1079 aa17.26■□□□□ 0.35
PHF3-209ENST00000509330 CATIPQ7Z7H3 387 aa17.26■□□□□ 0.35
PHF3-209ENST00000509330 ANO8Q9HCE9 1232 aaPredicted RBP17.26■□□□□ 0.35
PHF3-209ENST00000509330 VPS54Q9P1Q0 977 aa17.26■□□□□ 0.35
PHF3-209ENST00000509330 PDS5AQ29RF7 1337 aaKnown RBP17.26■□□□□ 0.35
PHF3-209ENST00000509330 USP17L3A6NCW0 530 aa17.26■□□□□ 0.35
PHF3-209ENST00000509330 USP17L4A6NCW7 530 aa17.26■□□□□ 0.35
PHF3-209ENST00000509330 CCDC192P0DO97 292 aa17.26■□□□□ 0.35
PHF3-209ENST00000509330 PICALMQ13492 652 aa17.26■□□□□ 0.35
PHF3-209ENST00000509330 USP17L1Q7RTZ2 530 aa17.26■□□□□ 0.35
PHF3-209ENST00000509330 CLSTN2Q9H4D0 955 aa17.26■□□□□ 0.35
PHF3-209ENST00000509330 MKNK2Q9HBH9 465 aa17.26■□□□□ 0.35
PHF3-209ENST00000509330 ARPP21Q9UBL0 812 aaPredicted RBP17.26■□□□□ 0.35
PHF3-209ENST00000509330 PLSCR1O15162 318 aa17.25■□□□□ 0.35
PHF3-209ENST00000509330 SPTLC2O15270 562 aa17.25■□□□□ 0.35
PHF3-209ENST00000509330 HOXA10P31260 410 aaPredicted RBP17.25■□□□□ 0.35
PHF3-209ENST00000509330 TFAP4Q01664 338 aa17.25■□□□□ 0.35
PHF3-209ENST00000509330 EZH2Q15910 746 aaKnown RBP17.25■□□□□ 0.35
PHF3-209ENST00000509330 CRACR2BQ8N4Y2 399 aaPredicted RBP17.25■□□□□ 0.35
PHF3-209ENST00000509330 PPP1R9BQ96SB3 815 aa17.25■□□□□ 0.35
PHF3-209ENST00000509330 DDX19AQ9NUU7 478 aaKnown RBP17.25■□□□□ 0.35
PHF3-209ENST00000509330 BAG3O95817 575 aa17.25■□□□□ 0.35
PHF3-209ENST00000509330 SCNN1DP51172 638 aa17.25■□□□□ 0.35
PHF3-209ENST00000509330 ANO6Q4KMQ2 910 aa17.25■□□□□ 0.35
PHF3-209ENST00000509330 ANO1Q5XXA6 986 aa17.25■□□□□ 0.35
PHF3-209ENST00000509330 NBPF11Q86T75 865 aa17.25■□□□□ 0.35
PHF3-209ENST00000509330 LUZP1Q86V48 1076 aa17.25■□□□□ 0.35
PHF3-209ENST00000509330 DIS3L2Q8IYB7 885 aaKnown RBP17.25■□□□□ 0.35
PHF3-209ENST00000509330 OXER1Q8TDS5 423 aa17.25■□□□□ 0.35
PHF3-209ENST00000509330 CRAMP1Q96RY5 1269 aa17.25■□□□□ 0.35
PHF3-209ENST00000509330 RTFDC1Q9BY42 306 aaPredicted RBP17.25■□□□□ 0.35
PHF3-209ENST00000509330 RTEL1Q9NZ71 1219 aa17.25■□□□□ 0.35
PHF3-209ENST00000509330 V9GY48 417 aaPredicted RBP17.25■□□□□ 0.35
PHF3-209ENST00000509330 DUOX1Q9NRD9 1551 aa17.25■□□□□ 0.35
PHF3-209ENST00000509330 MROH7-TTC4A0A0A0MT08 1334 aa17.25■□□□□ 0.35
PHF3-209ENST00000509330 G3V3G9 751 aa17.25■□□□□ 0.35
PHF3-209ENST00000509330 CHRNA5P30532 468 aa17.25■□□□□ 0.35
PHF3-209ENST00000509330 PDE4BQ07343 736 aa17.25■□□□□ 0.35
PHF3-209ENST00000509330 DCAF8Q5TAQ9 597 aa17.25■□□□□ 0.35
PHF3-209ENST00000509330 RASGRP2Q7LDG7 609 aa17.25■□□□□ 0.35
PHF3-209ENST00000509330 TEX11Q8IYF3 940 aa17.25■□□□□ 0.35
PHF3-209ENST00000509330 PDGFDQ9GZP0 370 aaPredicted RBP17.25■□□□□ 0.35
PHF3-209ENST00000509330 KCNQ5Q9NR82 932 aa17.25■□□□□ 0.35
PHF3-209ENST00000509330 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.25■□□□□ 0.35
PHF3-209ENST00000509330 SLC3A2P08195 630 aaKnown RBP17.24■□□□□ 0.35
PHF3-209ENST00000509330 NDUFA8P51970 172 aa17.24■□□□□ 0.35
PHF3-209ENST00000509330 DPP8Q6V1X1 898 aaPredicted RBP17.24■□□□□ 0.35
PHF3-209ENST00000509330 BRAPQ7Z569 592 aa17.24■□□□□ 0.35
PHF3-209ENST00000509330 TMTC2Q8N394 836 aa17.24■□□□□ 0.35
PHF3-209ENST00000509330 ZC3H12CQ9C0D7 883 aaKnown RBP17.24■□□□□ 0.35
PHF3-209ENST00000509330 DBNDD1Q9H9R9 158 aa17.24■□□□□ 0.35
PHF3-209ENST00000509330 MRVI1Q9Y6F6 885 aa17.24■□□□□ 0.35
PHF3-209ENST00000509330 AKAP17AQ02040 695 aaKnown RBP17.24■□□□□ 0.35
PHF3-209ENST00000509330 SPECC1Q5M775 1068 aa17.24■□□□□ 0.35
PHF3-209ENST00000509330 CLIC6Q96NY7 704 aa17.24■□□□□ 0.35
PHF3-209ENST00000509330 DNAJC25Q9H1X3 360 aa17.24■□□□□ 0.35
PHF3-209ENST00000509330 KINO60870 393 aaKnown RBP17.23■□□□□ 0.35
PHF3-209ENST00000509330 POTEAQ6S8J7 498 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms