RNA–Protein interactions for RNA: ENST00000508086.1

CCSER1-206, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 3

Gene CCSER1, Length 518 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-206ENST00000508086 CEACAM5P06731 702 aa8.08□□□□□ -1.12
CCSER1-206ENST00000508086 KIF4BQ2VIQ3 1234 aa8.08□□□□□ -1.12
CCSER1-206ENST00000508086 SYDE1Q6ZW31 735 aaPredicted RBP8.08□□□□□ -1.12
CCSER1-206ENST00000508086 AEBP1Q8IUX7 1158 aa8.08□□□□□ -1.12
CCSER1-206ENST00000508086 SULF2Q8IWU5 870 aa8.08□□□□□ -1.12
CCSER1-206ENST00000508086 SMYD4Q8IYR2 804 aaPredicted RBP8.08□□□□□ -1.12
CCSER1-206ENST00000508086 ANKRD24Q8TF21 1146 aa8.08□□□□□ -1.12
CCSER1-206ENST00000508086 NECAB3Q96P71 396 aaPredicted RBP8.08□□□□□ -1.12
CCSER1-206ENST00000508086 ZC3H12CQ9C0D7 883 aaKnown RBP8.08□□□□□ -1.12
CCSER1-206ENST00000508086 PPM1HQ9ULR3 514 aa8.08□□□□□ -1.12
CCSER1-206ENST00000508086 ZBTB7CA1YPR0 619 aa8.07□□□□□ -1.12
CCSER1-206ENST00000508086 IKZF1Q13422 519 aa8.07□□□□□ -1.12
CCSER1-206ENST00000508086 FLAD1Q8NFF5 587 aa8.07□□□□□ -1.12
CCSER1-206ENST00000508086 LIN37Q96GY3 246 aaPredicted RBP8.07□□□□□ -1.12
CCSER1-206ENST00000508086 C12orf49Q9H741 205 aa8.07□□□□□ -1.12
CCSER1-206ENST00000508086 CRIM1Q9NZV1 1036 aa8.07□□□□□ -1.12
CCSER1-206ENST00000508086 NCANO14594 1321 aa8.06□□□□□ -1.12
CCSER1-206ENST00000508086 ENC1O14682 589 aa8.06□□□□□ -1.12
CCSER1-206ENST00000508086 TSPAN15O95858 294 aa8.06□□□□□ -1.12
CCSER1-206ENST00000508086 LDHBP07195 334 aaKnown RBP8.06□□□□□ -1.12
CCSER1-206ENST00000508086 NME2P22392 152 aa8.06□□□□□ -1.12
CCSER1-206ENST00000508086 ARNTP27540 789 aa8.06□□□□□ -1.12
CCSER1-206ENST00000508086 ZNF252P-AS1Q0IIN9 211 aa8.06□□□□□ -1.12
CCSER1-206ENST00000508086 MKNK2Q9HBH9 465 aa8.06□□□□□ -1.12
CCSER1-206ENST00000508086 CACNA2D2Q9NY47 1150 aa8.06□□□□□ -1.12
CCSER1-206ENST00000508086 SPG7Q9UQ90 795 aa8.06□□□□□ -1.12
CCSER1-206ENST00000508086 ZNF503-AS2A6NEH8 195 aa8.05□□□□□ -1.12
CCSER1-206ENST00000508086 NFIBO00712 420 aa8.05□□□□□ -1.12
CCSER1-206ENST00000508086 LEFTY1O75610 366 aa8.05□□□□□ -1.12
CCSER1-206ENST00000508086 AFMP43652 599 aa8.05□□□□□ -1.12
CCSER1-206ENST00000508086 ID3Q02535 119 aa8.05□□□□□ -1.12
CCSER1-206ENST00000508086 ZP2Q05996 745 aa8.05□□□□□ -1.12
CCSER1-206ENST00000508086 SIAH1Q8IUQ4 282 aa8.05□□□□□ -1.12
CCSER1-206ENST00000508086 FANCD2OSQ96PS1 177 aa8.05□□□□□ -1.12
CCSER1-206ENST00000508086 LMCD1Q9NZU5 365 aa8.05□□□□□ -1.12
CCSER1-206ENST00000508086 CCDC9Q9Y3X0 531 aaKnown RBP8.05□□□□□ -1.12
CCSER1-206ENST00000508086 TPTE2Q6XPS3 522 aa8.04□□□□□ -1.12
CCSER1-206ENST00000508086 LCNL1Q6ZST4 164 aa8.04□□□□□ -1.12
CCSER1-206ENST00000508086 ASB11Q8WXH4 323 aa8.04□□□□□ -1.12
CCSER1-206ENST00000508086 KCNB2Q92953 911 aa8.04□□□□□ -1.12
CCSER1-206ENST00000508086 FRMD6Q96NE9 622 aa8.04□□□□□ -1.12
CCSER1-206ENST00000508086 EMILIN2Q9BXX0 1053 aa8.04□□□□□ -1.12
CCSER1-206ENST00000508086 CEP44Q9C0F1 390 aa8.04□□□□□ -1.12
CCSER1-206ENST00000508086 FAM8A1Q9UBU6 413 aa8.04□□□□□ -1.12
CCSER1-206ENST00000508086 PCOLCE2Q9UKZ9 415 aa8.04□□□□□ -1.12
CCSER1-206ENST00000508086 PAGE1O75459 146 aa8.03□□□□□ -1.12
CCSER1-206ENST00000508086 HCLS1P14317 486 aaPredicted RBP8.03□□□□□ -1.12
CCSER1-206ENST00000508086 BMP6P22004 513 aa8.03□□□□□ -1.12
CCSER1-206ENST00000508086 OXCT1P55809 520 aa8.03□□□□□ -1.12
CCSER1-206ENST00000508086 DUSP23Q9BVJ7 150 aa8.03□□□□□ -1.12
CCSER1-206ENST00000508086 DISC1Q9NRI5 854 aa8.03□□□□□ -1.12
CCSER1-206ENST00000508086 U3KQE9 123 aa8.03□□□□□ -1.12
CCSER1-206ENST00000508086 ANKRD33BA6NCL7 494 aa8.02□□□□□ -1.13
CCSER1-206ENST00000508086 PRPF40AO75400 957 aaKnown RBP8.02□□□□□ -1.13
CCSER1-206ENST00000508086 FBXO24O75426 580 aa8.02□□□□□ -1.13
CCSER1-206ENST00000508086 USP17L7P0C7H9 530 aa8.02□□□□□ -1.13
CCSER1-206ENST00000508086 GNA15P30679 374 aa8.02□□□□□ -1.13
CCSER1-206ENST00000508086 TTLL4Q14679 1199 aa8.02□□□□□ -1.13
CCSER1-206ENST00000508086 MAP1SQ66K74 1059 aaPredicted RBP8.02□□□□□ -1.13
CCSER1-206ENST00000508086 TOP6BLQ8N6T0 577 aa8.02□□□□□ -1.13
CCSER1-206ENST00000508086 GPBAR1Q8TDU6 330 aa8.02□□□□□ -1.13
CCSER1-206ENST00000508086 PLAGL2Q9UPG8 496 aa8.02□□□□□ -1.13
CCSER1-206ENST00000508086 BUD31P41223 144 aaPredicted RBP8.01□□□□□ -1.13
CCSER1-206ENST00000508086 ZC3H12AQ5D1E8 599 aaKnown RBP8.01□□□□□ -1.13
CCSER1-206ENST00000508086 LCE5AQ5TCM9 118 aa8.01□□□□□ -1.13
CCSER1-206ENST00000508086 DNAJC14Q6Y2X3 702 aaPredicted RBP8.01□□□□□ -1.13
CCSER1-206ENST00000508086 PRR23BQ6ZRT6 265 aa8.01□□□□□ -1.13
CCSER1-206ENST00000508086 SNX11Q9Y5W9 270 aa8.01□□□□□ -1.13
CCSER1-206ENST00000508086 TMEM67Q5HYA8 995 aa8□□□□□ -1.13
CCSER1-206ENST00000508086 RASIP1Q5U651 963 aa8□□□□□ -1.13
CCSER1-206ENST00000508086 MPRIPQ6WCQ1 1025 aa8□□□□□ -1.13
CCSER1-206ENST00000508086 NPAS4Q8IUM7 802 aa8□□□□□ -1.13
CCSER1-206ENST00000508086 PHF6Q8IWS0 365 aaKnown RBP eCLIP8□□□□□ -1.13
CCSER1-206ENST00000508086 GRIN3AQ8TCU5 1115 aa8□□□□□ -1.13
CCSER1-206ENST00000508086 RNF19AQ9NV58 838 aa8□□□□□ -1.13
CCSER1-206ENST00000508086 TRIM37O94972 964 aa7.99□□□□□ -1.13
CCSER1-206ENST00000508086 GLI1P08151 1106 aa7.99□□□□□ -1.13
CCSER1-206ENST00000508086 CELA3AP09093 270 aa7.99□□□□□ -1.13
CCSER1-206ENST00000508086 C1QTNF9P0C862 333 aa7.99□□□□□ -1.13
CCSER1-206ENST00000508086 ERVK-24P63145 666 aa7.99□□□□□ -1.13
CCSER1-206ENST00000508086 FGD1P98174 961 aa7.99□□□□□ -1.13
CCSER1-206ENST00000508086 EAPPQ56P03 285 aaPredicted RBP7.99□□□□□ -1.13
CCSER1-206ENST00000508086 C1QL4Q86Z23 238 aa7.99□□□□□ -1.13
CCSER1-206ENST00000508086 CILP2Q8IUL8 1156 aa7.99□□□□□ -1.13
CCSER1-206ENST00000508086 KIRREL1Q96J84 757 aa7.99□□□□□ -1.13
CCSER1-206ENST00000508086 CBX8Q9HC52 389 aa7.99□□□□□ -1.13
CCSER1-206ENST00000508086 GTF2IRD1Q9UHL9 959 aa7.99□□□□□ -1.13
CCSER1-206ENST00000508086 CTNND2Q9UQB3 1225 aa7.99□□□□□ -1.13
CCSER1-206ENST00000508086 SAMM50Q9Y512 469 aa7.99□□□□□ -1.13
CCSER1-206ENST00000508086 NEFMP07197 916 aa7.98□□□□□ -1.13
CCSER1-206ENST00000508086 TMEM253P0C7T8 217 aa7.98□□□□□ -1.13
CCSER1-206ENST00000508086 EIF4BP23588 611 aaKnown RBP7.98□□□□□ -1.13
CCSER1-206ENST00000508086 FYB2Q5VWT5 728 aa7.98□□□□□ -1.13
CCSER1-206ENST00000508086 SCARA3Q6AZY7 606 aa7.98□□□□□ -1.13
CCSER1-206ENST00000508086 DIRC2Q96SL1 478 aa7.98□□□□□ -1.13
CCSER1-206ENST00000508086 DUSP9Q99956 384 aaKnown RBP7.98□□□□□ -1.13
CCSER1-206ENST00000508086 AK5Q9Y6K8 562 aa7.98□□□□□ -1.13
CCSER1-206ENST00000508086 LLGL2Q6P1M3 1020 aa7.97□□□□□ -1.13
CCSER1-206ENST00000508086 TTLL10Q6ZVT0 673 aa7.97□□□□□ -1.13
CCSER1-206ENST00000508086 SV2BQ7L1I2 683 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms