RNA–Protein interactions for RNA: ENST00000508086.1

CCSER1-206, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 3

Gene CCSER1, Length 518 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-206ENST00000508086 AEBP2Q6ZN18 517 aaPredicted RBP31.59■■■□□ 2.65
CCSER1-206ENST00000508086 CHIC1Q5VXU3 224 aa29.76■■■□□ 2.35
CCSER1-206ENST00000508086 SENP3Q9H4L4 574 aaPredicted RBP27.13■■□□□ 1.93
CCSER1-206ENST00000508086 PHF23Q9BUL5 403 aaPredicted RBP26.72■■□□□ 1.87
CCSER1-206ENST00000508086 FOXD1Q16676 465 aa25.26■■□□□ 1.63
CCSER1-206ENST00000508086 MSH5O43196 834 aa23.84■■□□□ 1.41
CCSER1-206ENST00000508086 POTEDQ86YR6 584 aa23.74■■□□□ 1.39
CCSER1-206ENST00000508086 PLPPR3Q6T4P5 718 aa23.72■■□□□ 1.39
CCSER1-206ENST00000508086 PIAS4Q8N2W9 510 aaPredicted RBP23.65■■□□□ 1.38
CCSER1-206ENST00000508086 PPP6R1Q9UPN7 881 aa23.35■■□□□ 1.33
CCSER1-206ENST00000508086 ADRA2BP18089 450 aa23.34■■□□□ 1.33
CCSER1-206ENST00000508086 MAPK8IP2Q13387 824 aaPredicted RBP21.52■■□□□ 1.04
CCSER1-206ENST00000508086 SCAF1Q9H7N4 1312 aaKnown RBP21.48■■□□□ 1.03
CCSER1-206ENST00000508086 DMRT2Q9Y5R5 561 aa21.41■■□□□ 1.02
CCSER1-206ENST00000508086 DCAF8L1A6NGE4 600 aa20.82■□□□□ 0.92
CCSER1-206ENST00000508086 PPP4R3CPQ6ZMV5 832 aa20.75■□□□□ 0.91
CCSER1-206ENST00000508086 CACNB1Q02641 598 aaPredicted RBP20.74■□□□□ 0.91
CCSER1-206ENST00000508086 HOXD11P31277 338 aaPredicted RBP20.46■□□□□ 0.87
CCSER1-206ENST00000508086 CNKSR2Q8WXI2 1034 aa20.43■□□□□ 0.86
CCSER1-206ENST00000508086 RNF216Q9NWF9 866 aaPredicted RBP20.28■□□□□ 0.84
CCSER1-206ENST00000508086 RNF39Q9H2S5 420 aa20.23■□□□□ 0.83
CCSER1-206ENST00000508086 C1QBPQ07021 282 aaKnown RBP19.98■□□□□ 0.79
CCSER1-206ENST00000508086 NCBP3Q53F19 620 aaKnown RBP19.95■□□□□ 0.78
CCSER1-206ENST00000508086 DNAJC5BQ9UF47 199 aa19.76■□□□□ 0.75
CCSER1-206ENST00000508086 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.72■□□□□ 0.75
CCSER1-206ENST00000508086 NPM3O75607 178 aaKnown RBP19.52■□□□□ 0.72
CCSER1-206ENST00000508086 U3KPZ7 1027 aaPredicted RBP19.09■□□□□ 0.65
CCSER1-206ENST00000508086 CAPN15O75808 1086 aa19.08■□□□□ 0.64
CCSER1-206ENST00000508086 SPINK5Q9NQ38 1064 aaPredicted RBP18.95■□□□□ 0.62
CCSER1-206ENST00000508086 KCNA4P22459 653 aa18.89■□□□□ 0.61
CCSER1-206ENST00000508086 DSG3P32926 999 aa18.86■□□□□ 0.61
CCSER1-206ENST00000508086 APLP2Q06481 763 aa18.72■□□□□ 0.59
CCSER1-206ENST00000508086 TRHP20396 242 aaPredicted RBP18.69■□□□□ 0.58
CCSER1-206ENST00000508086 SLC4A2P04920 1241 aa18.66■□□□□ 0.58
CCSER1-206ENST00000508086 POTEHQ6S545 545 aa18.59■□□□□ 0.57
CCSER1-206ENST00000508086 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.58■□□□□ 0.56
CCSER1-206ENST00000508086 HNRNPUL2Q1KMD3 747 aaKnown RBP18.58■□□□□ 0.56
CCSER1-206ENST00000508086 ZNF219Q9P2Y4 722 aaPredicted RBP18.57■□□□□ 0.56
CCSER1-206ENST00000508086 ABCB7O75027 752 aa18.56■□□□□ 0.56
CCSER1-206ENST00000508086 SAMD1Q6SPF0 538 aaPredicted RBP18.43■□□□□ 0.54
CCSER1-206ENST00000508086 MYCNP04198 464 aaPredicted RBP18.12■□□□□ 0.49
CCSER1-206ENST00000508086 RBM42Q9BTD8 480 aaKnown RBP18.12■□□□□ 0.49
CCSER1-206ENST00000508086 POLA2Q14181 598 aa18.05■□□□□ 0.48
CCSER1-206ENST00000508086 SLC4A1APQ9BWU0 796 aaKnown RBP17.86■□□□□ 0.45
CCSER1-206ENST00000508086 CHRDL2Q6WN34 429 aa17.8■□□□□ 0.44
CCSER1-206ENST00000508086 FOXD4L1Q9NU39 408 aa17.76■□□□□ 0.43
CCSER1-206ENST00000508086 ZBTB12Q9Y330 459 aaPredicted RBP17.68■□□□□ 0.42
CCSER1-206ENST00000508086 ATF5Q9Y2D1 282 aaPredicted RBP17.65■□□□□ 0.42
CCSER1-206ENST00000508086 AKT1S1Q96B36 256 aa17.58■□□□□ 0.4
CCSER1-206ENST00000508086 OSCARQ8IYS5 282 aa17.46■□□□□ 0.39
CCSER1-206ENST00000508086 REM2Q8IYK8 340 aaPredicted RBP17.41■□□□□ 0.38
CCSER1-206ENST00000508086 PIP4P2Q8N4L2 257 aa17.28■□□□□ 0.36
CCSER1-206ENST00000508086 SP7Q8TDD2 431 aaPredicted RBP17.28■□□□□ 0.36
CCSER1-206ENST00000508086 ZBTB22O15209 634 aa17.26■□□□□ 0.35
CCSER1-206ENST00000508086 PITPNM1O00562 1244 aa17.22■□□□□ 0.35
CCSER1-206ENST00000508086 ATXN8OSP0DMR3 200 aa17.21■□□□□ 0.35
CCSER1-206ENST00000508086 HAX1O00165 279 aa17.2■□□□□ 0.34
CCSER1-206ENST00000508086 FBLN2P98095 1184 aa17.18■□□□□ 0.34
CCSER1-206ENST00000508086 FXR2P51116 673 aaKnown RBP eCLIP17.08■□□□□ 0.32
CCSER1-206ENST00000508086 SPDYE2BA6NHP3 402 aa17.06■□□□□ 0.32
CCSER1-206ENST00000508086 SPDYE6P0CI01 402 aa17.06■□□□□ 0.32
CCSER1-206ENST00000508086 SPDYE2Q495Y8 402 aa17.06■□□□□ 0.32
CCSER1-206ENST00000508086 CLEC11AQ9Y240 323 aa16.97■□□□□ 0.31
CCSER1-206ENST00000508086 ZNF692Q9BU19 519 aaPredicted RBP16.89■□□□□ 0.29
CCSER1-206ENST00000508086 SPDYE1Q8NFV5 336 aaPredicted RBP16.88■□□□□ 0.29
CCSER1-206ENST00000508086 PRKAR2AP13861 404 aaKnown RBP16.84■□□□□ 0.29
CCSER1-206ENST00000508086 MKRN4PQ13434 485 aaPredicted RBP16.79■□□□□ 0.28
CCSER1-206ENST00000508086 EVX2Q03828 476 aa16.76■□□□□ 0.27
CCSER1-206ENST00000508086 SSUH2Q9Y2M2 353 aa16.7■□□□□ 0.26
CCSER1-206ENST00000508086 PRR29P0C7W0 189 aa16.6■□□□□ 0.25
CCSER1-206ENST00000508086 PABPN1Q86U42 306 aaKnown RBP eCLIP16.6■□□□□ 0.25
CCSER1-206ENST00000508086 CHADLQ6NUI6 762 aa16.58■□□□□ 0.24
CCSER1-206ENST00000508086 C19orf67A6NJJ6 358 aa16.55■□□□□ 0.24
CCSER1-206ENST00000508086 GABBR2O75899 941 aa16.44■□□□□ 0.22
CCSER1-206ENST00000508086 CSRNP3Q8WYN3 585 aa16.34■□□□□ 0.21
CCSER1-206ENST00000508086 EHMT2Q96KQ7 1210 aa16.33■□□□□ 0.2
CCSER1-206ENST00000508086 CD44P16070 742 aaKnown RBP16.3■□□□□ 0.2
CCSER1-206ENST00000508086 FARP1Q9Y4F1 1045 aaPredicted RBP16.27■□□□□ 0.2
CCSER1-206ENST00000508086 LHX8Q68G74 356 aa16.24■□□□□ 0.19
CCSER1-206ENST00000508086 STAG3Q9UJ98 1225 aa16.1■□□□□ 0.17
CCSER1-206ENST00000508086 CLCN6P51797 869 aa16.09■□□□□ 0.17
CCSER1-206ENST00000508086 DCBLD2Q96PD2 775 aa16.07■□□□□ 0.16
CCSER1-206ENST00000508086 ZRANB1Q9UGI0 708 aa16.05■□□□□ 0.16
CCSER1-206ENST00000508086 SPDYE4A6NLX3 237 aa15.99■□□□□ 0.15
CCSER1-206ENST00000508086 POTEIP0CG38 1075 aa15.99■□□□□ 0.15
CCSER1-206ENST00000508086 CREBZFQ9NS37 354 aa15.97■□□□□ 0.15
CCSER1-206ENST00000508086 PAK3O75914 559 aaPredicted RBP15.93■□□□□ 0.14
CCSER1-206ENST00000508086 ZNF579Q8NAF0 562 aaKnown RBP15.93■□□□□ 0.14
CCSER1-206ENST00000508086 NPM1P06748 294 aaKnown RBP eCLIP15.83■□□□□ 0.12
CCSER1-206ENST00000508086 GALR2O43603 387 aaPredicted RBP15.79■□□□□ 0.12
CCSER1-206ENST00000508086 PHF12Q96QT6 1004 aa15.74■□□□□ 0.11
CCSER1-206ENST00000508086 PLSCR2Q9NRY7 297 aa15.6■□□□□ 0.09
CCSER1-206ENST00000508086 MNX1P50219 401 aaPredicted RBP15.57■□□□□ 0.08
CCSER1-206ENST00000508086 TSPYL2Q9H2G4 693 aaPredicted RBP15.53■□□□□ 0.08
CCSER1-206ENST00000508086 OTUD5Q96G74 571 aa15.51■□□□□ 0.07
CCSER1-206ENST00000508086 MS4A3Q96HJ5 214 aa15.49■□□□□ 0.07
CCSER1-206ENST00000508086 PLEKHG5O94827 1062 aa15.48■□□□□ 0.07
CCSER1-206ENST00000508086 POTEB2H3BUK9 544 aa15.47■□□□□ 0.07
CCSER1-206ENST00000508086 PELP1Q8IZL8 1130 aaKnown RBP15.47■□□□□ 0.07
CCSER1-206ENST00000508086 METRNQ9UJH8 293 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms