RNA–Protein interactions for RNA: ENST00000507488.6

ATP2C1-212, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATP2C1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-212ENST00000507488 BICD2Q8TD16 824 aa5.35□□□□□ -1.55
ATP2C1-212ENST00000507488 AK7Q96M32 723 aa5.35□□□□□ -1.55
ATP2C1-212ENST00000507488 PDCL3Q9H2J4 239 aa5.35□□□□□ -1.55
ATP2C1-212ENST00000507488 BSDC1Q9NW68 430 aaPredicted RBP5.35□□□□□ -1.55
ATP2C1-212ENST00000507488 RGS17Q9UGC6 210 aaPredicted RBP5.35□□□□□ -1.55
ATP2C1-212ENST00000507488 PATL2C9JE40 543 aaKnown RBP5.35□□□□□ -1.55
ATP2C1-212ENST00000507488 HMGB1P09429 215 aaKnown RBP5.35□□□□□ -1.55
ATP2C1-212ENST00000507488 RBM10P98175 930 aaKnown RBP5.35□□□□□ -1.55
ATP2C1-212ENST00000507488 TYRO3Q06418 890 aa5.35□□□□□ -1.55
ATP2C1-212ENST00000507488 PPARAQ07869 468 aa5.35□□□□□ -1.55
ATP2C1-212ENST00000507488 NOLC1Q14978 699 aaKnown RBP eCLIP5.35□□□□□ -1.55
ATP2C1-212ENST00000507488 TYW1BQ6NUM6 668 aa5.35□□□□□ -1.55
ATP2C1-212ENST00000507488 CDAN1Q8IWY9 1227 aa5.35□□□□□ -1.55
ATP2C1-212ENST00000507488 CCAR1Q8IX12 1150 aaKnown RBP5.35□□□□□ -1.55
ATP2C1-212ENST00000507488 NCOA7Q8NI08 942 aa5.35□□□□□ -1.55
ATP2C1-212ENST00000507488 FAM200AQ8TCP9 573 aa5.35□□□□□ -1.55
ATP2C1-212ENST00000507488 TGFBRAP1Q8WUH2 860 aa5.35□□□□□ -1.55
ATP2C1-212ENST00000507488 GPKOWQ92917 476 aaPredicted RBP eCLIP5.35□□□□□ -1.555e-6■■□□□ 13.8
ATP2C1-212ENST00000507488 ZBTB9Q96C00 473 aa5.35□□□□□ -1.55
ATP2C1-212ENST00000507488 TNMDQ9H2S6 317 aa5.35□□□□□ -1.55
ATP2C1-212ENST00000507488 DDX19AQ9NUU7 478 aaKnown RBP5.35□□□□□ -1.55
ATP2C1-212ENST00000507488 PYCARDQ9ULZ3 195 aa5.35□□□□□ -1.55
ATP2C1-212ENST00000507488 CHD4Q14839 1912 aa5.35□□□□□ -1.55
ATP2C1-212ENST00000507488 BRWD3Q6RI45 1802 aa5.35□□□□□ -1.55
ATP2C1-212ENST00000507488 ZNF804BA4D1E1 1349 aa5.35□□□□□ -1.55
ATP2C1-212ENST00000507488 EYSQ5T1H1 3165 aa5.35□□□□□ -1.55
ATP2C1-212ENST00000507488 A0A087X0B3 334 aa5.35□□□□□ -1.55
ATP2C1-212ENST00000507488 TPM3P06753 285 aa5.35□□□□□ -1.55
ATP2C1-212ENST00000507488 ME1P48163 572 aa5.35□□□□□ -1.55
ATP2C1-212ENST00000507488 METAP2P50579 478 aaKnown RBP eCLIP5.35□□□□□ -1.55
ATP2C1-212ENST00000507488 SF3B3Q15393 1217 aaKnown RBP5.35□□□□□ -1.55
ATP2C1-212ENST00000507488 CCDC144BQ3MJ40 725 aa5.35□□□□□ -1.55
ATP2C1-212ENST00000507488 RALYLQ86SE5 291 aaKnown RBP5.35□□□□□ -1.55
ATP2C1-212ENST00000507488 FOXP4Q8IVH2 680 aaPredicted RBP5.35□□□□□ -1.55
ATP2C1-212ENST00000507488 CERS5Q8N5B7 392 aa5.35□□□□□ -1.55
ATP2C1-212ENST00000507488 EEF2KMTQ96G04 330 aa5.35□□□□□ -1.55
ATP2C1-212ENST00000507488 NLRP3Q96P20 1036 aa5.35□□□□□ -1.55
ATP2C1-212ENST00000507488 ZSCAN16Q9H4T2 348 aaPredicted RBP5.35□□□□□ -1.55
ATP2C1-212ENST00000507488 IL17RBQ9NRM6 502 aa5.35□□□□□ -1.55
ATP2C1-212ENST00000507488 PCDHB6Q9Y5E3 794 aa5.35□□□□□ -1.55
ATP2C1-212ENST00000507488 C4BP0C0L5 1744 aa5.34□□□□□ -1.55
ATP2C1-212ENST00000507488 MYH7P12883 1935 aa5.34□□□□□ -1.55
ATP2C1-212ENST00000507488 SPDYE4A6NLX3 237 aa5.34□□□□□ -1.55
ATP2C1-212ENST00000507488 GOLGA6L6A8MZA4 724 aa5.34□□□□□ -1.55
ATP2C1-212ENST00000507488 DYNC1I1O14576 645 aa5.34□□□□□ -1.55
ATP2C1-212ENST00000507488 SERPINB2P05120 415 aa5.34□□□□□ -1.55
ATP2C1-212ENST00000507488 KIF23Q02241 960 aaPredicted RBP5.34□□□□□ -1.55
ATP2C1-212ENST00000507488 UBE3CQ15386 1083 aa5.34□□□□□ -1.55
ATP2C1-212ENST00000507488 KRT40Q6A162 431 aa5.34□□□□□ -1.55
ATP2C1-212ENST00000507488 FBXO33Q7Z6M2 555 aa5.34□□□□□ -1.55
ATP2C1-212ENST00000507488 DEFB132Q7Z7B7 95 aa5.34□□□□□ -1.55
ATP2C1-212ENST00000507488 PDILTQ8N807 584 aa5.34□□□□□ -1.55
ATP2C1-212ENST00000507488 LLPHQ9BRT6 129 aaKnown RBP5.34□□□□□ -1.55
ATP2C1-212ENST00000507488 CLSTN2Q9H4D0 955 aa5.34□□□□□ -1.55
ATP2C1-212ENST00000507488 CBX8Q9HC52 389 aa5.34□□□□□ -1.55
ATP2C1-212ENST00000507488 FAM13BQ9NYF5 915 aa5.34□□□□□ -1.55
ATP2C1-212ENST00000507488 CFAP45Q9UL16 551 aa5.34□□□□□ -1.55
ATP2C1-212ENST00000507488 ANGEL1Q9UNK9 670 aaKnown RBP5.34□□□□□ -1.55
ATP2C1-212ENST00000507488 TNKSO95271 1327 aa5.34□□□□□ -1.55
ATP2C1-212ENST00000507488 MAGEB6P1A0A0J9YX57 407 aa5.34□□□□□ -1.55
ATP2C1-212ENST00000507488 NKRFO15226 690 aaKnown RBP eCLIP5.34□□□□□ -1.55
ATP2C1-212ENST00000507488 SNAP25P60880 206 aa5.34□□□□□ -1.55
ATP2C1-212ENST00000507488 MAP3K12Q12852 859 aa5.34□□□□□ -1.55
ATP2C1-212ENST00000507488 PICALMQ13492 652 aa5.34□□□□□ -1.55
ATP2C1-212ENST00000507488 SF3A1Q15459 793 aaKnown RBP5.34□□□□□ -1.55
ATP2C1-212ENST00000507488 TXNRD1Q16881 649 aa5.34□□□□□ -1.55
ATP2C1-212ENST00000507488 AKNAD1Q5T1N1 836 aa5.34□□□□□ -1.55
ATP2C1-212ENST00000507488 TICAM2Q86XR7 235 aa5.34□□□□□ -1.55
ATP2C1-212ENST00000507488 CNBD1Q8NA66 436 aa5.34□□□□□ -1.55
ATP2C1-212ENST00000507488 ALG1Q9BT22 464 aa5.34□□□□□ -1.55
ATP2C1-212ENST00000507488 DBNDD1Q9H9R9 158 aa5.34□□□□□ -1.55
ATP2C1-212ENST00000507488 DCP1AQ9NPI6 582 aaPredicted RBP5.34□□□□□ -1.55
ATP2C1-212ENST00000507488 XIRP2A4UGR9 3374 aa5.34□□□□□ -1.56
ATP2C1-212ENST00000507488 SHTN1A0MZ66 631 aa5.34□□□□□ -1.56
ATP2C1-212ENST00000507488 POLRMTO00411 1230 aaKnown RBP5.34□□□□□ -1.56
ATP2C1-212ENST00000507488 UFL1O94874 794 aa5.34□□□□□ -1.56
ATP2C1-212ENST00000507488 PRR29P0C7W0 189 aa5.34□□□□□ -1.56
ATP2C1-212ENST00000507488 HIBADHP31937 336 aaKnown RBP5.34□□□□□ -1.56
ATP2C1-212ENST00000507488 EN1Q05925 392 aaPredicted RBP5.34□□□□□ -1.56
ATP2C1-212ENST00000507488 PKN1Q16512 942 aa5.34□□□□□ -1.56
ATP2C1-212ENST00000507488 DPCR1Q3MIW9 517 aa5.34□□□□□ -1.56
ATP2C1-212ENST00000507488 PARP10Q53GL7 1025 aa5.34□□□□□ -1.56
ATP2C1-212ENST00000507488 NAA16Q6N069 864 aaPredicted RBP5.34□□□□□ -1.56
ATP2C1-212ENST00000507488 SHC4Q6S5L8 630 aa5.34□□□□□ -1.56
ATP2C1-212ENST00000507488 POTEAQ6S8J7 498 aa5.34□□□□□ -1.56
ATP2C1-212ENST00000507488 SLC30A10Q6XR72 485 aa5.34□□□□□ -1.56
ATP2C1-212ENST00000507488 GPIHBP1Q8IV16 184 aa5.34□□□□□ -1.56
ATP2C1-212ENST00000507488 FBXO18Q8NFZ0 1043 aa5.34□□□□□ -1.56
ATP2C1-212ENST00000507488 C8orf76Q96K31 380 aa5.34□□□□□ -1.56
ATP2C1-212ENST00000507488 DDX4Q9NQI0 724 aaKnown RBP5.34□□□□□ -1.56
ATP2C1-212ENST00000507488 SPTLC3Q9NUV7 552 aa5.34□□□□□ -1.56
ATP2C1-212ENST00000507488 CNTNAP4Q9C0A0 1308 aa5.33□□□□□ -1.56
ATP2C1-212ENST00000507488 GOLGA8AA7E2F4 631 aa5.33□□□□□ -1.56
ATP2C1-212ENST00000507488 BMP6P22004 513 aa5.33□□□□□ -1.56
ATP2C1-212ENST00000507488 PNOCQ13519 176 aa5.33□□□□□ -1.56
ATP2C1-212ENST00000507488 RBM43Q6ZSC3 357 aaKnown RBP5.33□□□□□ -1.56
ATP2C1-212ENST00000507488 MFSD6Q6ZSS7 791 aa5.33□□□□□ -1.56
ATP2C1-212ENST00000507488 SRBD1Q8N5C6 995 aaKnown RBP5.33□□□□□ -1.56
ATP2C1-212ENST00000507488 FSIP1Q8NA03 581 aa5.33□□□□□ -1.56
ATP2C1-212ENST00000507488 LRRC15Q8TF66 581 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms