RNA–Protein interactions for RNA: ENST00000507355.5

POLR2J3-212, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-212ENST00000507355 Q7L0L9 218 aa16.56■□□□□ 0.24
POLR2J3-212ENST00000507355 ANKRD13CQ8N6S4 541 aa16.56■□□□□ 0.24
POLR2J3-212ENST00000507355 FRAT1Q92837 279 aaPredicted RBP16.56■□□□□ 0.24
POLR2J3-212ENST00000507355 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.56■□□□□ 0.24
POLR2J3-212ENST00000507355 AFG3L2Q9Y4W6 797 aa16.56■□□□□ 0.24
POLR2J3-212ENST00000507355 PHIPQ8WWQ0 1821 aa16.55■□□□□ 0.24
POLR2J3-212ENST00000507355 DDTLA6NHG4 134 aaPredicted RBP16.55■□□□□ 0.24
POLR2J3-212ENST00000507355 GNAI2P04899 355 aa16.55■□□□□ 0.24
POLR2J3-212ENST00000507355 SLURP2P0DP57 97 aa16.55■□□□□ 0.24
POLR2J3-212ENST00000507355 TRIM27P14373 513 aa16.55■□□□□ 0.24
POLR2J3-212ENST00000507355 BTDP43251 543 aa16.55■□□□□ 0.24
POLR2J3-212ENST00000507355 MAP3K10Q02779 954 aa16.55■□□□□ 0.24
POLR2J3-212ENST00000507355 MECOMQ03112 1051 aa16.55■□□□□ 0.24
POLR2J3-212ENST00000507355 ERICH6Q7L0X2 663 aa16.55■□□□□ 0.24
POLR2J3-212ENST00000507355 NECAB2Q7Z6G3 386 aa16.55■□□□□ 0.24
POLR2J3-212ENST00000507355 CCDC84Q86UT8 332 aaPredicted RBP16.55■□□□□ 0.24
POLR2J3-212ENST00000507355 DEFB123Q8N688 67 aa16.55■□□□□ 0.24
POLR2J3-212ENST00000507355 CLUAP1Q96AJ1 413 aa16.55■□□□□ 0.24
POLR2J3-212ENST00000507355 COA7Q96BR5 231 aa16.55■□□□□ 0.24
POLR2J3-212ENST00000507355 CRISPLD2Q9H0B8 497 aa16.55■□□□□ 0.24
POLR2J3-212ENST00000507355 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.55■□□□□ 0.24
POLR2J3-212ENST00000507355 DDX4Q9NQI0 724 aaKnown RBP16.55■□□□□ 0.24
POLR2J3-212ENST00000507355 PICALMQ13492 652 aa16.54■□□□□ 0.24
POLR2J3-212ENST00000507355 GORABQ5T7V8 394 aa16.54■□□□□ 0.24
POLR2J3-212ENST00000507355 ATF7IPQ6VMQ6 1270 aa16.54■□□□□ 0.24
POLR2J3-212ENST00000507355 HMG20BQ9P0W2 317 aa16.54■□□□□ 0.24
POLR2J3-212ENST00000507355 SLC45A1Q9Y2W3 748 aa16.54■□□□□ 0.24
POLR2J3-212ENST00000507355 MROH7-TTC4A0A0A0MT08 1334 aa16.53■□□□□ 0.24
POLR2J3-212ENST00000507355 GPR75-ASB3A0A0A6YYF3 556 aa16.53■□□□□ 0.24
POLR2J3-212ENST00000507355 PNMA6EA0A0J9YXQ4 647 aa16.53■□□□□ 0.24
POLR2J3-212ENST00000507355 SYN1P17600 705 aa16.53■□□□□ 0.24
POLR2J3-212ENST00000507355 MNX1P50219 401 aaPredicted RBP16.53■□□□□ 0.24
POLR2J3-212ENST00000507355 G3BP1Q13283 466 aaKnown RBP eCLIP16.53■□□□□ 0.24
POLR2J3-212ENST00000507355 TBC1D9Q6ZT07 1266 aa16.53■□□□□ 0.24
POLR2J3-212ENST00000507355 ZNF384Q8TF68 577 aa16.53■□□□□ 0.24
POLR2J3-212ENST00000507355 GDF15Q99988 308 aa16.53■□□□□ 0.24
POLR2J3-212ENST00000507355 AGTPBP1Q9UPW5 1226 aa16.53■□□□□ 0.24
POLR2J3-212ENST00000507355 DDX60LQ5H9U9 1706 aaKnown RBP16.53■□□□□ 0.24
POLR2J3-212ENST00000507355 NPM3O75607 178 aaKnown RBP16.52■□□□□ 0.24
POLR2J3-212ENST00000507355 LDHCP07864 332 aa16.52■□□□□ 0.24
POLR2J3-212ENST00000507355 RHBDL3P58872 404 aa16.52■□□□□ 0.24
POLR2J3-212ENST00000507355 TREML2Q5T2D2 321 aa16.52■□□□□ 0.24
POLR2J3-212ENST00000507355 PI16Q6UXB8 463 aa16.52■□□□□ 0.24
POLR2J3-212ENST00000507355 SPATA5Q8NB90 893 aa16.52■□□□□ 0.24
POLR2J3-212ENST00000507355 RFX7Q2KHR2 1363 aa16.51■□□□□ 0.23
POLR2J3-212ENST00000507355 UNC80Q8N2C7 3258 aa16.51■□□□□ 0.23
POLR2J3-212ENST00000507355 CTNND1O60716 968 aaKnown RBP16.51■□□□□ 0.23
POLR2J3-212ENST00000507355 CAPN2P17655 700 aa16.51■□□□□ 0.23
POLR2J3-212ENST00000507355 BMP8BP34820 402 aa16.51■□□□□ 0.23
POLR2J3-212ENST00000507355 NSUN4Q96CB9 384 aaKnown RBP16.51■□□□□ 0.23
POLR2J3-212ENST00000507355 RAI14Q9P0K7 980 aa16.51■□□□□ 0.23
POLR2J3-212ENST00000507355 HMGCRP04035 888 aa16.5■□□□□ 0.23
POLR2J3-212ENST00000507355 ARID4AP29374 1257 aaPredicted RBP16.5■□□□□ 0.23
POLR2J3-212ENST00000507355 MAGEA10P43363 369 aaPredicted RBP16.5■□□□□ 0.23
POLR2J3-212ENST00000507355 GSTO1P78417 241 aa16.5■□□□□ 0.23
POLR2J3-212ENST00000507355 TRIM32Q13049 653 aa16.5■□□□□ 0.23
POLR2J3-212ENST00000507355 FAM110CQ1W6H9 321 aa16.5■□□□□ 0.23
POLR2J3-212ENST00000507355 TMEM57Q8N5G2 664 aa16.5■□□□□ 0.23
POLR2J3-212ENST00000507355 NBPF3Q9H094 633 aa16.5■□□□□ 0.23
POLR2J3-212ENST00000507355 PNMA3Q9UL41 463 aa16.5■□□□□ 0.23
POLR2J3-212ENST00000507355 FAM196BA6NMK8 535 aa16.49■□□□□ 0.23
POLR2J3-212ENST00000507355 TBC1D12O60347 775 aa16.49■□□□□ 0.23
POLR2J3-212ENST00000507355 MCAMP43121 646 aa16.49■□□□□ 0.23
POLR2J3-212ENST00000507355 GPR153Q6NV75 609 aa16.49■□□□□ 0.23
POLR2J3-212ENST00000507355 ANKLE1Q8NAG6 615 aa16.49■□□□□ 0.23
POLR2J3-212ENST00000507355 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.49■□□□□ 0.23
POLR2J3-212ENST00000507355 STXBP5LQ9Y2K9 1186 aa16.49■□□□□ 0.23
POLR2J3-212ENST00000507355 LOC285556D6RIA3 1793 aa16.49■□□□□ 0.23
POLR2J3-212ENST00000507355 MAP4K4O95819 1239 aaPredicted RBP16.48■□□□□ 0.23
POLR2J3-212ENST00000507355 UQCRFS1P1P0C7P4 283 aa16.48■□□□□ 0.23
POLR2J3-212ENST00000507355 ZKSCAN2Q63HK3 967 aa16.48■□□□□ 0.23
POLR2J3-212ENST00000507355 TDHQ8IZJ6 230 aa16.48■□□□□ 0.23
POLR2J3-212ENST00000507355 UBE2OQ9C0C9 1292 aaKnown RBP16.48■□□□□ 0.23
POLR2J3-212ENST00000507355 C11orf49Q9H6J7 331 aa16.48■□□□□ 0.23
POLR2J3-212ENST00000507355 HMX1Q9NP08 348 aaPredicted RBP16.48■□□□□ 0.23
POLR2J3-212ENST00000507355 LRP2BPQ9P2M1 347 aa16.48■□□□□ 0.23
POLR2J3-212ENST00000507355 RPTORQ8N122 1335 aa16.47■□□□□ 0.23
POLR2J3-212ENST00000507355 ATP8B2P98198 1209 aa16.47■□□□□ 0.23
POLR2J3-212ENST00000507355 LRIT3Q3SXY7 679 aa16.47■□□□□ 0.23
POLR2J3-212ENST00000507355 SNRKQ9NRH2 765 aa16.47■□□□□ 0.23
POLR2J3-212ENST00000507355 MTMR10Q9NXD2 777 aa16.47■□□□□ 0.23
POLR2J3-212ENST00000507355 ATAD5Q96QE3 1844 aa16.47■□□□□ 0.23
POLR2J3-212ENST00000507355 HMGCS2P54868 508 aa16.46■□□□□ 0.23
POLR2J3-212ENST00000507355 SPP2Q13103 211 aa16.46■□□□□ 0.23
POLR2J3-212ENST00000507355 POLA2Q14181 598 aa16.46■□□□□ 0.23
POLR2J3-212ENST00000507355 TEX11Q8IYF3 940 aa16.46■□□□□ 0.23
POLR2J3-212ENST00000507355 PROCA1Q8NCQ7 364 aaPredicted RBP16.46■□□□□ 0.23
POLR2J3-212ENST00000507355 OSBPL5Q9H0X9 879 aaPredicted RBP16.46■□□□□ 0.23
POLR2J3-212ENST00000507355 GPR108Q9NPR9 543 aa16.46■□□□□ 0.23
POLR2J3-212ENST00000507355 PLXNB2O15031 1838 aa16.45■□□□□ 0.22
POLR2J3-212ENST00000507355 SURF6O75683 361 aaKnown RBP16.45■□□□□ 0.22
POLR2J3-212ENST00000507355 GCLCP48506 637 aaPredicted RBP16.45■□□□□ 0.22
POLR2J3-212ENST00000507355 OS9Q13438 667 aaPredicted RBP16.45■□□□□ 0.22
POLR2J3-212ENST00000507355 TNNI3KQ59H18 835 aa16.45■□□□□ 0.22
POLR2J3-212ENST00000507355 CCDC158Q5M9N0 1113 aa16.45■□□□□ 0.22
POLR2J3-212ENST00000507355 TTC39AQ5SRH9 613 aa16.45■□□□□ 0.22
POLR2J3-212ENST00000507355 SSH3Q8TE77 659 aa16.45■□□□□ 0.22
POLR2J3-212ENST00000507355 SH3RF3Q8TEJ3 882 aaPredicted RBP16.45■□□□□ 0.22
POLR2J3-212ENST00000507355 TRIB2Q92519 343 aa16.45■□□□□ 0.22
POLR2J3-212ENST00000507355 DBNDD2Q9BQY9 259 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms