RNA–Protein interactions for RNA: ENST00000506388.2

RCN1-202, Transcript of reticulocalbin 1, humanhuman

TSL 1 (best)

Gene RCN1, Length 1,658 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-202ENST00000506388 SWAP70Q9UH65 585 aa15.85■□□□□ 0.13
RCN1-202ENST00000506388 HERC5Q9UII4 1024 aaKnown RBP15.85■□□□□ 0.13
RCN1-202ENST00000506388 SERPINB13Q9UIV8 391 aa15.85■□□□□ 0.13
RCN1-202ENST00000506388 SNX14Q9Y5W7 946 aa15.85■□□□□ 0.13
RCN1-202ENST00000506388 ASTN2O75129 1339 aaPredicted RBP15.84■□□□□ 0.13
RCN1-202ENST00000506388 DDTLA6NHG4 134 aaPredicted RBP15.84■□□□□ 0.13
RCN1-202ENST00000506388 TCP10Q12799 353 aa15.84■□□□□ 0.13
RCN1-202ENST00000506388 C16orf86Q6ZW13 317 aa15.84■□□□□ 0.13
RCN1-202ENST00000506388 CNNM2Q9H8M5 875 aa15.84■□□□□ 0.13
RCN1-202ENST00000506388 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.84■□□□□ 0.13
RCN1-202ENST00000506388 MINDY4BA8MYZ0 360 aa15.83■□□□□ 0.13
RCN1-202ENST00000506388 HMGB1P09429 215 aaKnown RBP15.83■□□□□ 0.13
RCN1-202ENST00000506388 PDE4BQ07343 736 aa15.83■□□□□ 0.13
RCN1-202ENST00000506388 LDHDQ86WU2 507 aa15.83■□□□□ 0.13
RCN1-202ENST00000506388 KIF2CQ99661 725 aa15.83■□□□□ 0.13
RCN1-202ENST00000506388 E7EWF7 191 aa15.83■□□□□ 0.12
RCN1-202ENST00000506388 MFSD6Q6ZSS7 791 aa15.83■□□□□ 0.12
RCN1-202ENST00000506388 CDC37L1Q7L3B6 337 aa15.83■□□□□ 0.12
RCN1-202ENST00000506388 TBC1D10CQ8IV04 446 aa15.83■□□□□ 0.12
RCN1-202ENST00000506388 SULF1Q8IWU6 871 aa15.83■□□□□ 0.12
RCN1-202ENST00000506388 CSRNP1Q96S65 589 aa15.83■□□□□ 0.12
RCN1-202ENST00000506388 MTA3Q9BTC8 594 aa15.83■□□□□ 0.12
RCN1-202ENST00000506388 TMEM39BQ9GZU3 492 aa15.83■□□□□ 0.12
RCN1-202ENST00000506388 SAP30BPQ9UHR5 308 aaKnown RBP15.83■□□□□ 0.12
RCN1-202ENST00000506388 CYP2D6P10635 497 aa15.82■□□□□ 0.12
RCN1-202ENST00000506388 PSMA5P28066 241 aa15.82■□□□□ 0.12
RCN1-202ENST00000506388 HAND2P61296 217 aa15.82■□□□□ 0.12
RCN1-202ENST00000506388 TATDN1Q6P1N9 297 aa15.82■□□□□ 0.12
RCN1-202ENST00000506388 IPO9Q96P70 1041 aaKnown RBP15.82■□□□□ 0.12
RCN1-202ENST00000506388 KRT23Q9C075 422 aa15.82■□□□□ 0.12
RCN1-202ENST00000506388 NMRK2Q9NPI5 230 aa15.82■□□□□ 0.12
RCN1-202ENST00000506388 WDR19Q8NEZ3 1342 aa15.81■□□□□ 0.12
RCN1-202ENST00000506388 GREB1LQ9C091 1923 aaPredicted RBP15.81■□□□□ 0.12
RCN1-202ENST00000506388 CYP2D7A0A087X1C5 515 aa15.81■□□□□ 0.12
RCN1-202ENST00000506388 SUPT20HL1Q3ZLR7 823 aa15.81■□□□□ 0.12
RCN1-202ENST00000506388 STOX1Q6ZVD7 989 aa15.81■□□□□ 0.12
RCN1-202ENST00000506388 ZSCAN29Q8IWY8 852 aaPredicted RBP15.81■□□□□ 0.12
RCN1-202ENST00000506388 FBXL16Q8N461 479 aa15.81■□□□□ 0.12
RCN1-202ENST00000506388 NCOA7Q8NI08 942 aa15.81■□□□□ 0.12
RCN1-202ENST00000506388 ZSWIM6Q9HCJ5 1215 aa15.81■□□□□ 0.12
RCN1-202ENST00000506388 TAF6LQ9Y6J9 622 aa15.81■□□□□ 0.12
RCN1-202ENST00000506388 CDK8P49336 464 aa15.8■□□□□ 0.12
RCN1-202ENST00000506388 CTDSPL2Q05D32 466 aa15.8■□□□□ 0.12
RCN1-202ENST00000506388 TRDNQ13061 729 aa15.8■□□□□ 0.12
RCN1-202ENST00000506388 KRT26Q7Z3Y9 468 aa15.8■□□□□ 0.12
RCN1-202ENST00000506388 NEK1Q96PY6 1258 aa15.8■□□□□ 0.12
RCN1-202ENST00000506388 EAPPQ56P03 285 aaPredicted RBP15.79■□□□□ 0.12
RCN1-202ENST00000506388 CCDC17Q96LX7 622 aa15.79■□□□□ 0.12
RCN1-202ENST00000506388 ALDH8A1Q9H2A2 487 aaPredicted RBP15.79■□□□□ 0.12
RCN1-202ENST00000506388 DNAJC18Q9H819 358 aa15.79■□□□□ 0.12
RCN1-202ENST00000506388 TACC3Q9Y6A5 838 aa15.79■□□□□ 0.12
RCN1-202ENST00000506388 PLIN4Q96Q06 1357 aa15.79■□□□□ 0.12
RCN1-202ENST00000506388 SMIM22K7EJ46 135 aa15.79■□□□□ 0.12
RCN1-202ENST00000506388 SHMT1P34896 483 aa15.79■□□□□ 0.12
RCN1-202ENST00000506388 RABEP1Q15276 862 aa15.79■□□□□ 0.12
RCN1-202ENST00000506388 ADCK5Q3MIX3 580 aa15.79■□□□□ 0.12
RCN1-202ENST00000506388 DCAF15Q66K64 600 aa15.79■□□□□ 0.12
RCN1-202ENST00000506388 MB21D2Q8IYB1 491 aaPredicted RBP15.79■□□□□ 0.12
RCN1-202ENST00000506388 ESR2Q92731 530 aa15.79■□□□□ 0.12
RCN1-202ENST00000506388 GPBP1L1Q9HC44 474 aaPredicted RBP15.79■□□□□ 0.12
RCN1-202ENST00000506388 GINM1Q9NU53 330 aa15.79■□□□□ 0.12
RCN1-202ENST00000506388 PAPPA2Q9BXP8 1791 aa15.78■□□□□ 0.12
RCN1-202ENST00000506388 RASA1P20936 1047 aa15.78■□□□□ 0.12
RCN1-202ENST00000506388 EVX2Q03828 476 aa15.78■□□□□ 0.12
RCN1-202ENST00000506388 RUFY3Q7L099 469 aa15.78■□□□□ 0.12
RCN1-202ENST00000506388 DHX32Q7L7V1 743 aaKnown RBP15.78■□□□□ 0.12
RCN1-202ENST00000506388 CRACR2BQ8N4Y2 399 aaPredicted RBP15.78■□□□□ 0.12
RCN1-202ENST00000506388 TCP11L1Q9NUJ3 509 aa15.78■□□□□ 0.12
RCN1-202ENST00000506388 ZNF112Q9UJU3 913 aa15.78■□□□□ 0.12
RCN1-202ENST00000506388 NEDD4P46934 1319 aa15.78■□□□□ 0.12
RCN1-202ENST00000506388 MCM5P33992 734 aa15.77■□□□□ 0.12
RCN1-202ENST00000506388 EXOSC10Q01780 885 aaKnown RBP15.77■□□□□ 0.12
RCN1-202ENST00000506388 NBPF12Q5TAG4 269 aaPredicted RBP15.77■□□□□ 0.12
RCN1-202ENST00000506388 RALYLQ86SE5 291 aaKnown RBP15.77■□□□□ 0.12
RCN1-202ENST00000506388 CDAN1Q8IWY9 1227 aa15.77■□□□□ 0.12
RCN1-202ENST00000506388 DYNLL2Q96FJ2 89 aa15.77■□□□□ 0.12
RCN1-202ENST00000506388 JAKMIP1Q96N16 626 aaKnown RBP15.77■□□□□ 0.12
RCN1-202ENST00000506388 MKNK2Q9HBH9 465 aa15.77■□□□□ 0.12
RCN1-202ENST00000506388 SSC5DA1L4H1 1573 aa15.77■□□□□ 0.11
RCN1-202ENST00000506388 UNCXA6NJT0 531 aa15.76■□□□□ 0.11
RCN1-202ENST00000506388 POTEIP0CG38 1075 aa15.76■□□□□ 0.11
RCN1-202ENST00000506388 POTEJP0CG39 1038 aa15.76■□□□□ 0.11
RCN1-202ENST00000506388 NOVP48745 357 aa15.76■□□□□ 0.11
RCN1-202ENST00000506388 BLOC1S2Q6QNY1 142 aa15.76■□□□□ 0.11
RCN1-202ENST00000506388 ZNF444Q8N0Y2 327 aaPredicted RBP15.76■□□□□ 0.11
RCN1-202ENST00000506388 AGXT2Q9BYV1 514 aa15.76■□□□□ 0.11
RCN1-202ENST00000506388 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.76■□□□□ 0.11
RCN1-202ENST00000506388 ZSWIM5Q9P217 1185 aa15.76■□□□□ 0.11
RCN1-202ENST00000506388 CYP46A1Q9Y6A2 500 aa15.76■□□□□ 0.11
RCN1-202ENST00000506388 TRPM7Q96QT4 1865 aa15.76■□□□□ 0.11
RCN1-202ENST00000506388 ATAD5Q96QE3 1844 aa15.76■□□□□ 0.11
RCN1-202ENST00000506388 PHF20L1A8MW92 1017 aa15.76■□□□□ 0.11
RCN1-202ENST00000506388 KIF3CO14782 793 aa15.76■□□□□ 0.11
RCN1-202ENST00000506388 RPS6KB1P23443 525 aa15.76■□□□□ 0.11
RCN1-202ENST00000506388 MAP3K11Q16584 847 aa15.76■□□□□ 0.11
RCN1-202ENST00000506388 CCDC178Q5BJE1 867 aa15.76■□□□□ 0.11
RCN1-202ENST00000506388 CHADLQ6NUI6 762 aa15.76■□□□□ 0.11
RCN1-202ENST00000506388 USP48Q86UV5 1035 aa15.76■□□□□ 0.11
RCN1-202ENST00000506388 NEDD1Q8NHV4 660 aa15.76■□□□□ 0.11
RCN1-202ENST00000506388 TRIM34Q9BYJ4 488 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms