RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 METTL16Q86W50 562 aaKnown RBP18.08■□□□□ 0.48
SCLT1-208ENST00000506368 PPFIBP1Q86W92 1011 aa18.08■□□□□ 0.48
SCLT1-208ENST00000506368 CERS3Q8IU89 383 aa18.08■□□□□ 0.48
SCLT1-208ENST00000506368 CNGA4Q8IV77 575 aa18.08■□□□□ 0.48
SCLT1-208ENST00000506368 FAM204AQ9H8W3 233 aa18.08■□□□□ 0.48
SCLT1-208ENST00000506368 PCDHA5Q9Y5H7 936 aa18.08■□□□□ 0.48
SCLT1-208ENST00000506368 SEMA3EO15041 775 aa18.07■□□□□ 0.48
SCLT1-208ENST00000506368 ADKP55263 362 aaKnown RBP18.07■□□□□ 0.48
SCLT1-208ENST00000506368 KARSQ15046 597 aaKnown RBP18.07■□□□□ 0.48
SCLT1-208ENST00000506368 PTPAQ15257 358 aa18.07■□□□□ 0.48
SCLT1-208ENST00000506368 RABL6Q3YEC7 729 aaPredicted RBP18.07■□□□□ 0.48
SCLT1-208ENST00000506368 CCDC148Q8NFR7 591 aa18.07■□□□□ 0.48
SCLT1-208ENST00000506368 NFE2L3Q9Y4A8 694 aa18.07■□□□□ 0.48
SCLT1-208ENST00000506368 MEGF6O75095 1541 aa18.07■□□□□ 0.48
SCLT1-208ENST00000506368 SHOX2O60902 331 aaPredicted RBP18.07■□□□□ 0.48
SCLT1-208ENST00000506368 RFX5P48382 616 aaPredicted RBP18.07■□□□□ 0.48
SCLT1-208ENST00000506368 GSCP56915 257 aaPredicted RBP18.07■□□□□ 0.48
SCLT1-208ENST00000506368 GCKRQ14397 625 aa18.07■□□□□ 0.48
SCLT1-208ENST00000506368 POTEDQ86YR6 584 aa18.07■□□□□ 0.48
SCLT1-208ENST00000506368 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.07■□□□□ 0.48
SCLT1-208ENST00000506368 LGR6Q9HBX8 967 aa18.07■□□□□ 0.48
SCLT1-208ENST00000506368 PUF60Q9UHX1 559 aaKnown RBP18.07■□□□□ 0.48
SCLT1-208ENST00000506368 KCNH3Q9ULD8 1083 aa18.07■□□□□ 0.48
SCLT1-208ENST00000506368 WNK3Q9BYP7 1800 aa18.06■□□□□ 0.48
SCLT1-208ENST00000506368 ITIH6Q6UXX5 1313 aa18.06■□□□□ 0.48
SCLT1-208ENST00000506368 C4AP0C0L4 1744 aa18.06■□□□□ 0.48
SCLT1-208ENST00000506368 C4BP0C0L5 1744 aa18.06■□□□□ 0.48
SCLT1-208ENST00000506368 TARSL2A2RTX5 802 aaKnown RBP18.06■□□□□ 0.48
SCLT1-208ENST00000506368 NEURL1BA8MQ27 555 aa18.06■□□□□ 0.48
SCLT1-208ENST00000506368 PTPN12Q05209 780 aaKnown RBP18.06■□□□□ 0.48
SCLT1-208ENST00000506368 CPLX2Q6PUV4 134 aaKnown RBP18.06■□□□□ 0.48
SCLT1-208ENST00000506368 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.06■□□□□ 0.482e-6■■□□□ 12.4
SCLT1-208ENST00000506368 PAG1Q9NWQ8 432 aa18.06■□□□□ 0.48
SCLT1-208ENST00000506368 ATXN2Q99700 1313 aaKnown RBP18.06■□□□□ 0.48
SCLT1-208ENST00000506368 A0A0G2JS52 829 aa18.05■□□□□ 0.48
SCLT1-208ENST00000506368 VSNL1P62760 191 aa18.05■□□□□ 0.48
SCLT1-208ENST00000506368 GOLGA8FQ08AF8 430 aa18.05■□□□□ 0.48
SCLT1-208ENST00000506368 GOLGA8DPQ0D2H9 430 aa18.05■□□□□ 0.48
SCLT1-208ENST00000506368 TFCP2Q12800 502 aa18.05■□□□□ 0.48
SCLT1-208ENST00000506368 IMMTQ16891 758 aaKnown RBP18.05■□□□□ 0.48
SCLT1-208ENST00000506368 ZNF569Q5MCW4 686 aa18.05■□□□□ 0.48
SCLT1-208ENST00000506368 ISM2Q6H9L7 571 aa18.05■□□□□ 0.48
SCLT1-208ENST00000506368 TMTC1Q8IUR5 882 aa18.05■□□□□ 0.48
SCLT1-208ENST00000506368 SIPA1L3O60292 1781 aaPredicted RBP18.05■□□□□ 0.48
SCLT1-208ENST00000506368 KIF28PB7ZC32 967 aa18.05■□□□□ 0.48
SCLT1-208ENST00000506368 KCNQ3O43525 872 aa18.05■□□□□ 0.48
SCLT1-208ENST00000506368 RNF40O75150 1001 aa18.05■□□□□ 0.48
SCLT1-208ENST00000506368 IGKV5-2P06315 115 aa18.05■□□□□ 0.48
SCLT1-208ENST00000506368 SARSP49591 514 aaKnown RBP18.05■□□□□ 0.48
SCLT1-208ENST00000506368 MDM2Q00987 491 aaPredicted RBP18.05■□□□□ 0.48
SCLT1-208ENST00000506368 GBP6Q6ZN66 633 aa18.05■□□□□ 0.48
SCLT1-208ENST00000506368 DDX46Q7L014 1031 aaKnown RBP18.05■□□□□ 0.48
SCLT1-208ENST00000506368 RIC3Q7Z5B4 369 aa18.05■□□□□ 0.48
SCLT1-208ENST00000506368 GOLGA8BA8MQT2 603 aa18.04■□□□□ 0.48
SCLT1-208ENST00000506368 N4BP1O75113 896 aaKnown RBP18.04■□□□□ 0.48
SCLT1-208ENST00000506368 MORC3Q14149 939 aa18.04■□□□□ 0.48
SCLT1-208ENST00000506368 FILIP1LQ4L180 1135 aa18.04■□□□□ 0.48
SCLT1-208ENST00000506368 MAP3K14Q99558 947 aa18.04■□□□□ 0.48
SCLT1-208ENST00000506368 DESI2Q9BSY9 194 aa18.04■□□□□ 0.48
SCLT1-208ENST00000506368 MAN1B1Q9UKM7 699 aa18.04■□□□□ 0.48
SCLT1-208ENST00000506368 KLF18A0A0U1RQI7 1052 aa18.03■□□□□ 0.48
SCLT1-208ENST00000506368 RNF113AO15541 343 aaKnown RBP18.03■□□□□ 0.48
SCLT1-208ENST00000506368 RNMTO43148 476 aaKnown RBP18.03■□□□□ 0.48
SCLT1-208ENST00000506368 PRPF6O94906 941 aaKnown RBP18.03■□□□□ 0.48
SCLT1-208ENST00000506368 RXRBP28702 533 aa18.03■□□□□ 0.48
SCLT1-208ENST00000506368 MARCKSP29966 332 aaPredicted RBP18.03■□□□□ 0.48
SCLT1-208ENST00000506368 PLCD1P51178 756 aa18.03■□□□□ 0.48
SCLT1-208ENST00000506368 POSTNQ15063 836 aa18.03■□□□□ 0.48
SCLT1-208ENST00000506368 PROSER3Q2NL68 480 aa18.03■□□□□ 0.48
SCLT1-208ENST00000506368 DRC1Q96MC2 740 aa18.03■□□□□ 0.48
SCLT1-208ENST00000506368 DBNDD2Q9BQY9 259 aa18.03■□□□□ 0.48
SCLT1-208ENST00000506368 METTL22Q9BUU2 404 aaPredicted RBP18.03■□□□□ 0.48
SCLT1-208ENST00000506368 LZTFL1Q9NQ48 299 aa18.03■□□□□ 0.48
SCLT1-208ENST00000506368 CCDC196A0A1B0GTZ2 297 aa18.03■□□□□ 0.48
SCLT1-208ENST00000506368 ERLIN2O94905 339 aa18.03■□□□□ 0.48
SCLT1-208ENST00000506368 TRIM14Q14142 442 aa18.03■□□□□ 0.48
SCLT1-208ENST00000506368 TTC39AQ5SRH9 613 aa18.03■□□□□ 0.48
SCLT1-208ENST00000506368 FOXR1Q6PIV2 292 aa18.03■□□□□ 0.48
SCLT1-208ENST00000506368 VPS37DQ86XT2 251 aa18.03■□□□□ 0.48
SCLT1-208ENST00000506368 KRI1Q8N9T8 703 aaKnown RBP18.03■□□□□ 0.48
SCLT1-208ENST00000506368 NCOA7Q8NI08 942 aa18.03■□□□□ 0.48
SCLT1-208ENST00000506368 RUBCNQ92622 972 aa18.03■□□□□ 0.48
SCLT1-208ENST00000506368 SMARCC1Q92922 1105 aaPredicted RBP18.03■□□□□ 0.48
SCLT1-208ENST00000506368 ZFP91Q96JP5 570 aaPredicted RBP18.03■□□□□ 0.48
SCLT1-208ENST00000506368 ZSWIM4Q9H7M6 989 aa18.03■□□□□ 0.48
SCLT1-208ENST00000506368 IQSEC3Q9UPP2 1182 aaPredicted RBP18.03■□□□□ 0.48
SCLT1-208ENST00000506368 HPS5Q9UPZ3 1129 aa18.03■□□□□ 0.48
SCLT1-208ENST00000506368 KIF1CO43896 1103 aaKnown RBP18.02■□□□□ 0.48
SCLT1-208ENST00000506368 MFAP3LO75121 409 aa18.02■□□□□ 0.48
SCLT1-208ENST00000506368 ZFYP08048 801 aaPredicted RBP18.02■□□□□ 0.48
SCLT1-208ENST00000506368 IL2RBP14784 551 aa18.02■□□□□ 0.48
SCLT1-208ENST00000506368 LONRF3Q496Y0 759 aa18.02■□□□□ 0.48
SCLT1-208ENST00000506368 OTUD7BQ6GQQ9 843 aa18.02■□□□□ 0.48
SCLT1-208ENST00000506368 ZNF530Q6P9A1 599 aaPredicted RBP18.02■□□□□ 0.48
SCLT1-208ENST00000506368 RAD9BQ6WBX8 426 aa18.02■□□□□ 0.48
SCLT1-208ENST00000506368 SPATS2Q86XZ4 545 aaKnown RBP18.02■□□□□ 0.48
SCLT1-208ENST00000506368 MB21D2Q8IYB1 491 aaPredicted RBP18.02■□□□□ 0.48
SCLT1-208ENST00000506368 ZNF579Q8NAF0 562 aaKnown RBP18.02■□□□□ 0.48
SCLT1-208ENST00000506368 WWC3Q9ULE0 1092 aa18.02■□□□□ 0.48
SCLT1-208ENST00000506368 MAST3O60307 1309 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms