RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 IDI2Q9BXS1 227 aa10.19□□□□□ -0.78
SNF8-204ENST00000506104 LRP2BPQ9P2M1 347 aa10.19□□□□□ -0.78
SNF8-204ENST00000506104 FBXO3Q9UK99 471 aa10.19□□□□□ -0.78
SNF8-204ENST00000506104 AGTPBP1Q9UPW5 1226 aa10.19□□□□□ -0.78
SNF8-204ENST00000506104 AKAP2Q9Y2D5 859 aa10.19□□□□□ -0.78
SNF8-204ENST00000506104 ZNF521Q96K83 1311 aa10.18□□□□□ -0.78
SNF8-204ENST00000506104 CYP2B6P20813 491 aa10.18□□□□□ -0.78
SNF8-204ENST00000506104 IRX3P78415 501 aaPredicted RBP10.18□□□□□ -0.78
SNF8-204ENST00000506104 PABPC4Q13310 644 aaKnown RBP eCLIP10.18□□□□□ -0.783e-11■■■□□ 17.6
SNF8-204ENST00000506104 OS9Q13438 667 aaPredicted RBP10.18□□□□□ -0.78
SNF8-204ENST00000506104 PI16Q6UXB8 463 aa10.18□□□□□ -0.78
SNF8-204ENST00000506104 NECAB2Q7Z6G3 386 aa10.18□□□□□ -0.78
SNF8-204ENST00000506104 CRACR2BQ8N4Y2 399 aaPredicted RBP10.18□□□□□ -0.78
SNF8-204ENST00000506104 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.18□□□□□ -0.78
SNF8-204ENST00000506104 HTTP42858 3142 aa10.18□□□□□ -0.78
SNF8-204ENST00000506104 CDK5RAP2Q96SN8 1893 aa10.17□□□□□ -0.78
SNF8-204ENST00000506104 GAKO14976 1311 aa10.17□□□□□ -0.78
SNF8-204ENST00000506104 SYN1P17600 705 aa10.17□□□□□ -0.78
SNF8-204ENST00000506104 G3BP1Q13283 466 aaKnown RBP eCLIP10.17□□□□□ -0.78
SNF8-204ENST00000506104 PXYLP1Q8TE99 480 aa10.17□□□□□ -0.78
SNF8-204ENST00000506104 FRAT1Q92837 279 aaPredicted RBP10.17□□□□□ -0.78
SNF8-204ENST00000506104 LRCH3Q96II8 777 aa10.17□□□□□ -0.78
SNF8-204ENST00000506104 AS3MTQ9HBK9 375 aa10.17□□□□□ -0.78
SNF8-204ENST00000506104 SNRKQ9NRH2 765 aa10.17□□□□□ -0.78
SNF8-204ENST00000506104 TMOD4Q9NZQ9 345 aa10.17□□□□□ -0.78
SNF8-204ENST00000506104 SLC45A1Q9Y2W3 748 aa10.17□□□□□ -0.78
SNF8-204ENST00000506104 MYO5AQ9Y4I1 1855 aaKnown RBP10.17□□□□□ -0.78
SNF8-204ENST00000506104 DDX60LQ5H9U9 1706 aaKnown RBP10.16□□□□□ -0.78
SNF8-204ENST00000506104 USP17L5A8MUK1 530 aa10.16□□□□□ -0.78
SNF8-204ENST00000506104 DLL1O00548 723 aa10.16□□□□□ -0.78
SNF8-204ENST00000506104 PEX10O60683 326 aa10.16□□□□□ -0.78
SNF8-204ENST00000506104 GNAI3P08754 354 aa10.16□□□□□ -0.78
SNF8-204ENST00000506104 TRIM32Q13049 653 aa10.16□□□□□ -0.78
SNF8-204ENST00000506104 IRF5Q13568 498 aa10.16□□□□□ -0.78
SNF8-204ENST00000506104 MTMR2Q13614 643 aa10.16□□□□□ -0.78
SNF8-204ENST00000506104 FAM110CQ1W6H9 321 aa10.16□□□□□ -0.78
SNF8-204ENST00000506104 TTC39AQ5SRH9 613 aa10.16□□□□□ -0.78
SNF8-204ENST00000506104 WDR78Q5VTH9 848 aa10.16□□□□□ -0.78
SNF8-204ENST00000506104 SPATA5Q8NB90 893 aa10.16□□□□□ -0.78
SNF8-204ENST00000506104 ZNF280CQ8ND82 737 aa10.16□□□□□ -0.78
SNF8-204ENST00000506104 SH3RF3Q8TEJ3 882 aaPredicted RBP10.16□□□□□ -0.78
SNF8-204ENST00000506104 PAGR1Q9BTK6 254 aa10.16□□□□□ -0.78
SNF8-204ENST00000506104 OSBPL5Q9H0X9 879 aaPredicted RBP10.16□□□□□ -0.78
SNF8-204ENST00000506104 BCL11AQ9H165 835 aa10.16□□□□□ -0.78
SNF8-204ENST00000506104 ASCC2Q9H1I8 757 aaPredicted RBP10.16□□□□□ -0.78
SNF8-204ENST00000506104 HMX1Q9NP08 348 aaPredicted RBP10.16□□□□□ -0.78
SNF8-204ENST00000506104 COPRSQ9NQ92 184 aa10.16□□□□□ -0.78
SNF8-204ENST00000506104 HMG20BQ9P0W2 317 aa10.16□□□□□ -0.78
SNF8-204ENST00000506104 SAP30BPQ9UHR5 308 aaKnown RBP10.16□□□□□ -0.78
SNF8-204ENST00000506104 ATRNL1Q5VV63 1379 aa10.15□□□□□ -0.78
SNF8-204ENST00000506104 CENPFP49454 3210 aa10.15□□□□□ -0.78
SNF8-204ENST00000506104 GPR75-ASB3A0A0A6YYF3 556 aa10.15□□□□□ -0.78
SNF8-204ENST00000506104 SOX1O00570 391 aaPredicted RBP10.15□□□□□ -0.78
SNF8-204ENST00000506104 GDF11O95390 407 aa10.15□□□□□ -0.78
SNF8-204ENST00000506104 HMGCRP04035 888 aa10.15□□□□□ -0.78
SNF8-204ENST00000506104 GCLCP48506 637 aaPredicted RBP10.15□□□□□ -0.78
SNF8-204ENST00000506104 PDE3AQ14432 1141 aa10.15□□□□□ -0.78
SNF8-204ENST00000506104 ZYXQ15942 572 aaKnown RBP10.15□□□□□ -0.78
SNF8-204ENST00000506104 NAA16Q6N069 864 aaPredicted RBP10.15□□□□□ -0.78
SNF8-204ENST00000506104 UBE2Q1Q7Z7E8 422 aa10.15□□□□□ -0.78
SNF8-204ENST00000506104 MAPKAPK5Q8IW41 473 aa10.15□□□□□ -0.78
SNF8-204ENST00000506104 PROCA1Q8NCQ7 364 aaPredicted RBP10.15□□□□□ -0.78
SNF8-204ENST00000506104 CLUAP1Q96AJ1 413 aa10.15□□□□□ -0.78
SNF8-204ENST00000506104 AATFQ9NY61 560 aaKnown RBP eCLIP10.15□□□□□ -0.78
SNF8-204ENST00000506104 LOC285556D6RIA3 1793 aa10.15□□□□□ -0.78
SNF8-204ENST00000506104 MYH1P12882 1939 aa10.15□□□□□ -0.79
SNF8-204ENST00000506104 BAG3O95817 575 aa10.14□□□□□ -0.79
SNF8-204ENST00000506104 CAP2P40123 477 aa10.14□□□□□ -0.79
SNF8-204ENST00000506104 RHBDL3P58872 404 aa10.14□□□□□ -0.79
SNF8-204ENST00000506104 PLCB2Q00722 1185 aa10.14□□□□□ -0.79
SNF8-204ENST00000506104 TGFBRAP1Q8WUH2 860 aa10.14□□□□□ -0.79
SNF8-204ENST00000506104 NSUN4Q96CB9 384 aaKnown RBP10.14□□□□□ -0.79
SNF8-204ENST00000506104 FAM163AQ96GL9 167 aaPredicted RBP10.14□□□□□ -0.79
SNF8-204ENST00000506104 NBPF3Q9H094 633 aa10.14□□□□□ -0.79
SNF8-204ENST00000506104 C11orf49Q9H6J7 331 aa10.14□□□□□ -0.79
SNF8-204ENST00000506104 NDUFB9Q9Y6M9 179 aa10.14□□□□□ -0.79
SNF8-204ENST00000506104 RFX7Q2KHR2 1363 aa10.14□□□□□ -0.79
SNF8-204ENST00000506104 RPTORQ8N122 1335 aa10.13□□□□□ -0.79
SNF8-204ENST00000506104 TBC1D12O60347 775 aa10.13□□□□□ -0.79
SNF8-204ENST00000506104 UQCRFS1P1P0C7P4 283 aa10.13□□□□□ -0.79
SNF8-204ENST00000506104 PRKAR2AP13861 404 aaKnown RBP10.13□□□□□ -0.79
SNF8-204ENST00000506104 ZKSCAN1P17029 563 aaPredicted RBP10.13□□□□□ -0.79
SNF8-204ENST00000506104 RRP1BQ14684 758 aaKnown RBP10.13□□□□□ -0.79
SNF8-204ENST00000506104 P2RX7Q99572 595 aaKnown RBP10.13□□□□□ -0.79
SNF8-204ENST00000506104 FEZ1Q99689 392 aa10.13□□□□□ -0.79
SNF8-204ENST00000506104 NUDT12Q9BQG2 462 aa10.13□□□□□ -0.79
SNF8-204ENST00000506104 UBE2OQ9C0C9 1292 aaKnown RBP10.13□□□□□ -0.79
SNF8-204ENST00000506104 PAK6Q9NQU5 681 aaPredicted RBP10.13□□□□□ -0.79
SNF8-204ENST00000506104 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.13□□□□□ -0.79
SNF8-204ENST00000506104 MKI67P46013 3256 aaKnown RBP10.13□□□□□ -0.79
SNF8-204ENST00000506104 PLXNB2O15031 1838 aa10.12□□□□□ -0.79
SNF8-204ENST00000506104 PDS5AQ29RF7 1337 aaKnown RBP10.12□□□□□ -0.79
SNF8-204ENST00000506104 MAST2Q6P0Q8 1798 aa10.12□□□□□ -0.79
SNF8-204ENST00000506104 GNAI2P04899 355 aa10.12□□□□□ -0.79
SNF8-204ENST00000506104 HLA-DOAP06340 250 aa10.12□□□□□ -0.79
SNF8-204ENST00000506104 CNGA1P29973 690 aa10.12□□□□□ -0.79
SNF8-204ENST00000506104 MCAMP43121 646 aa10.12□□□□□ -0.79
SNF8-204ENST00000506104 USP5P45974 858 aa10.12□□□□□ -0.79
SNF8-204ENST00000506104 MAP3K10Q02779 954 aa10.12□□□□□ -0.79
SNF8-204ENST00000506104 CCDC158Q5M9N0 1113 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms