RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 HPS5Q9UPZ3 1129 aa9.43□□□□□ -0.9
COL4A5-208ENST00000505728 DDX49Q9Y6V7 483 aaKnown RBP9.43□□□□□ -0.9
COL4A5-208ENST00000505728 GAKO14976 1311 aa9.42□□□□□ -0.9
COL4A5-208ENST00000505728 ZC3H4Q9UPT8 1303 aaKnown RBP9.42□□□□□ -0.9
COL4A5-208ENST00000505728 CCDC69A6NI79 296 aa9.42□□□□□ -0.9
COL4A5-208ENST00000505728 GOLGA8BA8MQT2 603 aa9.42□□□□□ -0.9
COL4A5-208ENST00000505728 CPLX1O14810 134 aa9.42□□□□□ -0.9
COL4A5-208ENST00000505728 CDKL5O76039 1030 aa9.42□□□□□ -0.9
COL4A5-208ENST00000505728 MBD3O95983 291 aa9.42□□□□□ -0.9
COL4A5-208ENST00000505728 NCLP19338 710 aaKnown RBP9.42□□□□□ -0.9
COL4A5-208ENST00000505728 LMNB1P20700 586 aa9.42□□□□□ -0.9
COL4A5-208ENST00000505728 GTF2IP78347 998 aa9.42□□□□□ -0.9
COL4A5-208ENST00000505728 PDE4BQ07343 736 aa9.42□□□□□ -0.9
COL4A5-208ENST00000505728 WTAPQ15007 396 aa9.42□□□□□ -0.9
COL4A5-208ENST00000505728 PPP2R5BQ15173 497 aa9.42□□□□□ -0.9
COL4A5-208ENST00000505728 CCDC178Q5BJE1 867 aa9.42□□□□□ -0.9
COL4A5-208ENST00000505728 RRP12Q5JTH9 1297 aaKnown RBP9.42□□□□□ -0.9
COL4A5-208ENST00000505728 NFXL1Q6ZNB6 911 aa9.42□□□□□ -0.9
COL4A5-208ENST00000505728 AMOTL1Q8IY63 956 aa9.42□□□□□ -0.9
COL4A5-208ENST00000505728 C7orf43Q8WVR3 580 aa9.42□□□□□ -0.9
COL4A5-208ENST00000505728 MRIQ9BWK5 157 aa9.42□□□□□ -0.9
COL4A5-208ENST00000505728 ZSCAN16Q9H4T2 348 aaPredicted RBP9.42□□□□□ -0.9
COL4A5-208ENST00000505728 MKRN1Q9UHC7 482 aaKnown RBP9.42□□□□□ -0.9
COL4A5-208ENST00000505728 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.42□□□□□ -0.9
COL4A5-208ENST00000505728 GLTPD2A6NH11 291 aa9.41□□□□□ -0.9
COL4A5-208ENST00000505728 POTECB2RU33 542 aa9.41□□□□□ -0.9
COL4A5-208ENST00000505728 H3BQV1 296 aa9.41□□□□□ -0.9
COL4A5-208ENST00000505728 ZBTB43O43298 467 aa9.41□□□□□ -0.9
COL4A5-208ENST00000505728 DEKP35659 375 aaKnown RBP9.41□□□□□ -0.9
COL4A5-208ENST00000505728 BTDP43251 543 aa9.41□□□□□ -0.9
COL4A5-208ENST00000505728 METAP2P50579 478 aaKnown RBP eCLIP9.41□□□□□ -0.9
COL4A5-208ENST00000505728 CACNB1Q02641 598 aaPredicted RBP9.41□□□□□ -0.9
COL4A5-208ENST00000505728 DIXDC1Q155Q3 683 aa9.41□□□□□ -0.9
COL4A5-208ENST00000505728 GRIK5Q16478 980 aa9.41□□□□□ -0.9
COL4A5-208ENST00000505728 C12orf60Q5U649 245 aa9.41□□□□□ -0.9
COL4A5-208ENST00000505728 APOA5Q6Q788 366 aa9.41□□□□□ -0.9
COL4A5-208ENST00000505728 NKX2-3Q8TAU0 364 aa9.41□□□□□ -0.9
COL4A5-208ENST00000505728 SH3RF3Q8TEJ3 882 aaPredicted RBP9.41□□□□□ -0.9
COL4A5-208ENST00000505728 KLRG1Q96E93 195 aa9.41□□□□□ -0.9
COL4A5-208ENST00000505728 DDX11Q96FC9 970 aa9.41□□□□□ -0.9
COL4A5-208ENST00000505728 UBAC1Q9BSL1 405 aa9.41□□□□□ -0.9
COL4A5-208ENST00000505728 NCOA5Q9HCD5 579 aaKnown RBP9.41□□□□□ -0.9
COL4A5-208ENST00000505728 MCM9Q9NXL9 1143 aa9.41□□□□□ -0.9
COL4A5-208ENST00000505728 SLC12A7Q9Y666 1083 aa9.41□□□□□ -0.9
COL4A5-208ENST00000505728 NID2Q14112 1375 aa9.4□□□□□ -0.9
COL4A5-208ENST00000505728 CCDC196A0A1B0GTZ2 297 aa9.4□□□□□ -0.9
COL4A5-208ENST00000505728 GOLGA8AA7E2F4 631 aa9.4□□□□□ -0.9
COL4A5-208ENST00000505728 C21orf2O43822 256 aa9.4□□□□□ -0.9
COL4A5-208ENST00000505728 FDPSP14324 419 aaKnown RBP9.4□□□□□ -0.9
COL4A5-208ENST00000505728 KRT85P78386 507 aa9.4□□□□□ -0.9
COL4A5-208ENST00000505728 RESTQ13127 1097 aa9.4□□□□□ -0.9
COL4A5-208ENST00000505728 SEC23AQ15436 765 aa9.4□□□□□ -0.9
COL4A5-208ENST00000505728 ATL3Q6DD88 541 aa9.4□□□□□ -0.9
COL4A5-208ENST00000505728 HHIPL2Q6UWX4 724 aa9.4□□□□□ -0.9
COL4A5-208ENST00000505728 CDC37L1Q7L3B6 337 aa9.4□□□□□ -0.9
COL4A5-208ENST00000505728 USP48Q86UV5 1035 aa9.4□□□□□ -0.9
COL4A5-208ENST00000505728 IQCA1Q86XH1 822 aa9.4□□□□□ -0.9
COL4A5-208ENST00000505728 JMYQ8N9B5 988 aa9.4□□□□□ -0.9
COL4A5-208ENST00000505728 ZNF287Q9HBT7 754 aa9.4□□□□□ -0.9
COL4A5-208ENST00000505728 ZNF219Q9P2Y4 722 aaPredicted RBP9.4□□□□□ -0.9
COL4A5-208ENST00000505728 ORC3Q9UBD5 711 aaPredicted RBP9.4□□□□□ -0.9
COL4A5-208ENST00000505728 ISY1Q9ULR0 285 aaKnown RBP9.4□□□□□ -0.9
COL4A5-208ENST00000505728 CYP2D7A0A087X1C5 515 aa9.39□□□□□ -0.91
COL4A5-208ENST00000505728 RANBP6O60518 1105 aaKnown RBP9.39□□□□□ -0.91
COL4A5-208ENST00000505728 USP17L8P0C7I0 530 aa9.39□□□□□ -0.91
COL4A5-208ENST00000505728 CALM1P0DP23 149 aa9.39□□□□□ -0.91
COL4A5-208ENST00000505728 CALM2P0DP24 149 aa9.39□□□□□ -0.91
COL4A5-208ENST00000505728 CALM3P0DP25 149 aa9.39□□□□□ -0.91
COL4A5-208ENST00000505728 IFNAR1P17181 557 aa9.39□□□□□ -0.91
COL4A5-208ENST00000505728 RHBDL3P58872 404 aa9.39□□□□□ -0.91
COL4A5-208ENST00000505728 HDLBPQ00341 1268 aaKnown RBP9.39□□□□□ -0.91
COL4A5-208ENST00000505728 DNM1Q05193 864 aaKnown RBP9.39□□□□□ -0.91
COL4A5-208ENST00000505728 DOK7Q18PE1 504 aa9.39□□□□□ -0.91
COL4A5-208ENST00000505728 STRIP1Q5VSL9 837 aa9.39□□□□□ -0.91
COL4A5-208ENST00000505728 OLFM4Q6UX06 510 aa9.39□□□□□ -0.91
COL4A5-208ENST00000505728 TEX11Q8IYF3 940 aa9.39□□□□□ -0.91
COL4A5-208ENST00000505728 RTKN2Q8IZC4 609 aa9.39□□□□□ -0.91
COL4A5-208ENST00000505728 SMC1BQ8NDV3 1235 aa9.39□□□□□ -0.91
COL4A5-208ENST00000505728 TGFBRAP1Q8WUH2 860 aa9.39□□□□□ -0.91
COL4A5-208ENST00000505728 WASF1Q92558 559 aa9.39□□□□□ -0.91
COL4A5-208ENST00000505728 ANKS1AQ92625 1134 aa9.39□□□□□ -0.91
COL4A5-208ENST00000505728 C8orf76Q96K31 380 aa9.39□□□□□ -0.91
COL4A5-208ENST00000505728 ZSCAN10Q96SZ4 725 aaPredicted RBP9.39□□□□□ -0.91
COL4A5-208ENST00000505728 SCAND2PQ9GZW5 306 aaPredicted RBP9.39□□□□□ -0.91
COL4A5-208ENST00000505728 VPS33BQ9H267 617 aa9.39□□□□□ -0.91
COL4A5-208ENST00000505728 SENP2Q9HC62 589 aa9.39□□□□□ -0.91
COL4A5-208ENST00000505728 TCP11L1Q9NUJ3 509 aa9.39□□□□□ -0.91
COL4A5-208ENST00000505728 CNPY2Q9Y2B0 182 aa9.39□□□□□ -0.91
COL4A5-208ENST00000505728 LAMB1P07942 1786 aa9.39□□□□□ -0.91
COL4A5-208ENST00000505728 ROBO3Q96MS0 1386 aa9.38□□□□□ -0.91
COL4A5-208ENST00000505728 SCN4AP35499 1836 aa9.38□□□□□ -0.91
COL4A5-208ENST00000505728 TNKSO95271 1327 aa9.38□□□□□ -0.91
COL4A5-208ENST00000505728 DTNBO60941 627 aa9.38□□□□□ -0.91
COL4A5-208ENST00000505728 POLR3DP05423 398 aaPredicted RBP9.38□□□□□ -0.91
COL4A5-208ENST00000505728 CYP2D6P10635 497 aa9.38□□□□□ -0.91
COL4A5-208ENST00000505728 VEGFAP15692 232 aaPredicted RBP9.38□□□□□ -0.91
COL4A5-208ENST00000505728 CDC27P30260 824 aa9.38□□□□□ -0.91
COL4A5-208ENST00000505728 ADD1P35611 737 aaKnown RBP9.38□□□□□ -0.91
COL4A5-208ENST00000505728 IARSP41252 1262 aaKnown RBP9.38□□□□□ -0.91
COL4A5-208ENST00000505728 UBE2HP62256 183 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms