RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 RNF26Q9BY78 433 aaPredicted RBP20.04■□□□□ 0.8
TRAPPC11-204ENST00000505676 DLEC1Q9Y238 1755 aa20.04■□□□□ 0.8
TRAPPC11-204ENST00000505676 PLCG2P16885 1265 aa20.04■□□□□ 0.8
TRAPPC11-204ENST00000505676 ME1P48163 572 aa20.04■□□□□ 0.8
TRAPPC11-204ENST00000505676 TXNRD3Q86VQ6 643 aa20.04■□□□□ 0.8
TRAPPC11-204ENST00000505676 CCAR1Q8IX12 1150 aaKnown RBP20.04■□□□□ 0.8
TRAPPC11-204ENST00000505676 RNF214Q8ND24 703 aa20.04■□□□□ 0.8
TRAPPC11-204ENST00000505676 NKX2-3Q8TAU0 364 aa20.04■□□□□ 0.8
TRAPPC11-204ENST00000505676 AATFQ9NY61 560 aaKnown RBP eCLIP20.04■□□□□ 0.8
TRAPPC11-204ENST00000505676 NRXN2Q9P2S2 1712 aa20.03■□□□□ 0.8
TRAPPC11-204ENST00000505676 ESPNB1AK53 854 aa20.03■□□□□ 0.8
TRAPPC11-204ENST00000505676 USP17L12C9JPN9 530 aa20.03■□□□□ 0.8
TRAPPC11-204ENST00000505676 USP17L21D6R901 530 aa20.03■□□□□ 0.8
TRAPPC11-204ENST00000505676 UFL1O94874 794 aa20.03■□□□□ 0.8
TRAPPC11-204ENST00000505676 XBP1P17861 261 aa20.03■□□□□ 0.8
TRAPPC11-204ENST00000505676 GPSM2P81274 684 aa20.03■□□□□ 0.8
TRAPPC11-204ENST00000505676 GNL2Q13823 731 aaKnown RBP20.03■□□□□ 0.8
TRAPPC11-204ENST00000505676 SF3A1Q15459 793 aaKnown RBP20.03■□□□□ 0.8
TRAPPC11-204ENST00000505676 MRPS27Q92552 414 aaKnown RBP20.03■□□□□ 0.8
TRAPPC11-204ENST00000505676 SENP2Q9HC62 589 aa20.03■□□□□ 0.8
TRAPPC11-204ENST00000505676 ROBO3Q96MS0 1386 aa20.03■□□□□ 0.8
TRAPPC11-204ENST00000505676 KINO60870 393 aaKnown RBP20.03■□□□□ 0.8
TRAPPC11-204ENST00000505676 IFIT1BQ5T764 474 aaKnown RBP20.03■□□□□ 0.8
TRAPPC11-204ENST00000505676 ANO1Q5XXA6 986 aa20.03■□□□□ 0.8
TRAPPC11-204ENST00000505676 SASS6Q6UVJ0 657 aa20.03■□□□□ 0.8
TRAPPC11-204ENST00000505676 SP8Q8IXZ3 490 aa20.03■□□□□ 0.8
TRAPPC11-204ENST00000505676 FAM200AQ8TCP9 573 aa20.03■□□□□ 0.8
TRAPPC11-204ENST00000505676 SLC26A6Q9BXS9 759 aa20.03■□□□□ 0.8
TRAPPC11-204ENST00000505676 INCENPQ9NQS7 918 aa20.03■□□□□ 0.8
TRAPPC11-204ENST00000505676 CCDC39Q9UFE4 941 aa20.03■□□□□ 0.8
TRAPPC11-204ENST00000505676 SPTLC2O15270 562 aa20.02■□□□□ 0.8
TRAPPC11-204ENST00000505676 RANBP6O60518 1105 aaKnown RBP20.02■□□□□ 0.8
TRAPPC11-204ENST00000505676 NR1I2O75469 434 aa20.02■□□□□ 0.8
TRAPPC11-204ENST00000505676 DDR1Q08345 913 aa20.02■□□□□ 0.8
TRAPPC11-204ENST00000505676 RAB11FIP4Q86YS3 637 aa20.02■□□□□ 0.8
TRAPPC11-204ENST00000505676 CRACR2BQ8N4Y2 399 aaPredicted RBP20.02■□□□□ 0.8
TRAPPC11-204ENST00000505676 ZNF287Q9HBT7 754 aa20.02■□□□□ 0.8
TRAPPC11-204ENST00000505676 CD209Q9NNX6 404 aa20.02■□□□□ 0.8
TRAPPC11-204ENST00000505676 SUGT1Q9Y2Z0 365 aa20.02■□□□□ 0.8
TRAPPC11-204ENST00000505676 RGPD3A6NKT7 1758 aaPredicted RBP20.02■□□□□ 0.79
TRAPPC11-204ENST00000505676 RGPD4Q7Z3J3 1758 aa20.02■□□□□ 0.79
TRAPPC11-204ENST00000505676 PPP6R2O75170 966 aa20.02■□□□□ 0.79
TRAPPC11-204ENST00000505676 TYRO3Q06418 890 aa20.02■□□□□ 0.79
TRAPPC11-204ENST00000505676 FOXP1Q9H334 677 aaPredicted RBP20.02■□□□□ 0.79
TRAPPC11-204ENST00000505676 AKAP17AQ02040 695 aaKnown RBP20.01■□□□□ 0.79
TRAPPC11-204ENST00000505676 PHKBQ93100 1093 aa20.01■□□□□ 0.79
TRAPPC11-204ENST00000505676 AKT1S1Q96B36 256 aa20.01■□□□□ 0.79
TRAPPC11-204ENST00000505676 FAM163AQ96GL9 167 aaPredicted RBP20.01■□□□□ 0.79
TRAPPC11-204ENST00000505676 MROH7-TTC4A0A0A0MT08 1334 aa20.01■□□□□ 0.79
TRAPPC11-204ENST00000505676 CEBPZQ03701 1054 aaKnown RBP20■□□□□ 0.79
TRAPPC11-204ENST00000505676 ZSCAN30Q86W11 494 aa20■□□□□ 0.79
TRAPPC11-204ENST00000505676 ENAHQ8N8S7 591 aaPredicted RBP20■□□□□ 0.79
TRAPPC11-204ENST00000505676 MAP3K14Q99558 947 aa20■□□□□ 0.79
TRAPPC11-204ENST00000505676 RXRAP19793 462 aa20■□□□□ 0.79
TRAPPC11-204ENST00000505676 CLCN1P35523 988 aa20■□□□□ 0.79
TRAPPC11-204ENST00000505676 SLC39A14Q15043 492 aa20■□□□□ 0.79
TRAPPC11-204ENST00000505676 NBPF11Q86T75 865 aa20■□□□□ 0.79
TRAPPC11-204ENST00000505676 PROM2Q8N271 834 aa20■□□□□ 0.79
TRAPPC11-204ENST00000505676 ENGASEQ8NFI3 743 aa20■□□□□ 0.79
TRAPPC11-204ENST00000505676 PCDHA7Q9UN72 937 aa20■□□□□ 0.79
TRAPPC11-204ENST00000505676 MORC2Q9Y6X9 1032 aaPredicted RBP20■□□□□ 0.79
TRAPPC11-204ENST00000505676 FAM205AQ6ZU69 1335 aa19.99■□□□□ 0.79
TRAPPC11-204ENST00000505676 MMP1P03956 469 aa19.99■□□□□ 0.79
TRAPPC11-204ENST00000505676 NPR1P16066 1061 aa19.99■□□□□ 0.79
TRAPPC11-204ENST00000505676 OTUD7BQ6GQQ9 843 aa19.99■□□□□ 0.79
TRAPPC11-204ENST00000505676 FSIP1Q8NA03 581 aa19.99■□□□□ 0.79
TRAPPC11-204ENST00000505676 ZKSCAN3Q9BRR0 538 aa19.99■□□□□ 0.79
TRAPPC11-204ENST00000505676 MYL10Q9BUA6 226 aa19.99■□□□□ 0.79
TRAPPC11-204ENST00000505676 MKRN1Q9UHC7 482 aaKnown RBP19.99■□□□□ 0.79
TRAPPC11-204ENST00000505676 LTBP1Q14766 1721 aa19.99■□□□□ 0.79
TRAPPC11-204ENST00000505676 ECM29Q5VYK3 1845 aa19.99■□□□□ 0.79
TRAPPC11-204ENST00000505676 PPEF1O14829 653 aaPredicted RBP19.99■□□□□ 0.79
TRAPPC11-204ENST00000505676 POLR3DP05423 398 aaPredicted RBP19.99■□□□□ 0.79
TRAPPC11-204ENST00000505676 ALDH1B1P30837 517 aa19.99■□□□□ 0.79
TRAPPC11-204ENST00000505676 PDE6BP35913 854 aa19.99■□□□□ 0.79
TRAPPC11-204ENST00000505676 USP5P45974 858 aa19.99■□□□□ 0.79
TRAPPC11-204ENST00000505676 TPRNQ4KMQ1 711 aa19.99■□□□□ 0.79
TRAPPC11-204ENST00000505676 CCDC144CPQ8IYA2 1237 aa19.99■□□□□ 0.79
TRAPPC11-204ENST00000505676 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.99■□□□□ 0.79
TRAPPC11-204ENST00000505676 ATP6V0A2Q9Y487 856 aa19.99■□□□□ 0.79
TRAPPC11-204ENST00000505676 BAZ2AQ9UIF9 1905 aaKnown RBP19.98■□□□□ 0.79
TRAPPC11-204ENST00000505676 KIF28PB7ZC32 967 aa19.98■□□□□ 0.79
TRAPPC11-204ENST00000505676 PRPF3O43395 683 aaKnown RBP19.98■□□□□ 0.79
TRAPPC11-204ENST00000505676 C12orf60Q5U649 245 aa19.98■□□□□ 0.79
TRAPPC11-204ENST00000505676 TBC1D16Q8TBP0 767 aa19.98■□□□□ 0.79
TRAPPC11-204ENST00000505676 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.98■□□□□ 0.79
TRAPPC11-204ENST00000505676 CMA1P23946 247 aa19.98■□□□□ 0.79
TRAPPC11-204ENST00000505676 RILPL1Q5EBL4 403 aa19.98■□□□□ 0.79
TRAPPC11-204ENST00000505676 NUP133Q8WUM0 1156 aa19.98■□□□□ 0.79
TRAPPC11-204ENST00000505676 ANKS1AQ92625 1134 aa19.98■□□□□ 0.79
TRAPPC11-204ENST00000505676 COA1Q9GZY4 146 aa19.98■□□□□ 0.79
TRAPPC11-204ENST00000505676 MCM9Q9NXL9 1143 aa19.98■□□□□ 0.79
TRAPPC11-204ENST00000505676 CLIC4Q9Y696 253 aa19.98■□□□□ 0.79
TRAPPC11-204ENST00000505676 MRVI1Q9Y6F6 885 aa19.98■□□□□ 0.79
TRAPPC11-204ENST00000505676 PPFIA3O75145 1194 aa19.97■□□□□ 0.79
TRAPPC11-204ENST00000505676 SNW1Q13573 536 aaKnown RBP19.97■□□□□ 0.79
TRAPPC11-204ENST00000505676 DGKHQ86XP1 1220 aa19.97■□□□□ 0.79
TRAPPC11-204ENST00000505676 NOSTRINQ8IVI9 506 aa19.97■□□□□ 0.79
TRAPPC11-204ENST00000505676 TMX4Q9H1E5 349 aaPredicted RBP19.97■□□□□ 0.79
TRAPPC11-204ENST00000505676 TCP11L1Q9NUJ3 509 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms