RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 SHISA5Q8N114 240 aa6.61□□□□□ -1.35
CHD1-203ENST00000505657 EZH1Q92800 747 aaPredicted RBP6.61□□□□□ -1.35
CHD1-203ENST00000505657 ATXN3LQ9H3M9 355 aa6.61□□□□□ -1.35
CHD1-203ENST00000505657 LGR6Q9HBX8 967 aa6.61□□□□□ -1.35
CHD1-203ENST00000505657 PCDHGB7Q9Y5F8 929 aa6.61□□□□□ -1.35
CHD1-203ENST00000505657 SCAMP3O14828 347 aaKnown RBP6.6□□□□□ -1.35
CHD1-203ENST00000505657 F13A1P00488 732 aa6.6□□□□□ -1.35
CHD1-203ENST00000505657 LMNB1P20700 586 aa6.6□□□□□ -1.35
CHD1-203ENST00000505657 ERVK-24P63145 666 aa6.6□□□□□ -1.35
CHD1-203ENST00000505657 HDLBPQ00341 1268 aaKnown RBP6.6□□□□□ -1.35
CHD1-203ENST00000505657 CLEC10AQ8IUN9 316 aa6.6□□□□□ -1.35
CHD1-203ENST00000505657 FBXO27Q8NI29 283 aa6.6□□□□□ -1.35
CHD1-203ENST00000505657 ISL2Q96A47 359 aa6.6□□□□□ -1.35
CHD1-203ENST00000505657 ELMO3Q96BJ8 720 aa6.6□□□□□ -1.35
CHD1-203ENST00000505657 FAM83CQ9BQN1 747 aa6.6□□□□□ -1.35
CHD1-203ENST00000505657 METTL5Q9NRN9 209 aaKnown RBP6.6□□□□□ -1.35
CHD1-203ENST00000505657 ADAMTS1Q9UHI8 967 aa6.6□□□□□ -1.35
CHD1-203ENST00000505657 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.59□□□□□ -1.35
CHD1-203ENST00000505657 FAM95CA0A1B0GW59 222 aa6.59□□□□□ -1.35
CHD1-203ENST00000505657 PRAMEF27A3QJZ7 478 aa6.59□□□□□ -1.35
CHD1-203ENST00000505657 FAM221AA4D161 298 aa6.59□□□□□ -1.35
CHD1-203ENST00000505657 PRR19A6NJB7 356 aa6.59□□□□□ -1.35
CHD1-203ENST00000505657 GFRA2O00451 464 aa6.59□□□□□ -1.35
CHD1-203ENST00000505657 RACK1P63244 317 aaKnown RBP6.59□□□□□ -1.35
CHD1-203ENST00000505657 NFIAQ12857 509 aa6.59□□□□□ -1.35
CHD1-203ENST00000505657 SNAP47Q5SQN1 464 aa6.59□□□□□ -1.35
CHD1-203ENST00000505657 FBXL19Q6PCT2 694 aa6.59□□□□□ -1.35
CHD1-203ENST00000505657 CYFIP1Q7L576 1253 aa6.59□□□□□ -1.35
CHD1-203ENST00000505657 GOLM1Q8NBJ4 401 aa6.59□□□□□ -1.35
CHD1-203ENST00000505657 RNF34Q969K3 372 aa6.59□□□□□ -1.35
CHD1-203ENST00000505657 PIDD1Q9HB75 910 aa6.59□□□□□ -1.35
CHD1-203ENST00000505657 DAGLAQ9Y4D2 1042 aa6.59□□□□□ -1.35
CHD1-203ENST00000505657 RNGTTO60942 597 aaKnown RBP6.58□□□□□ -1.36
CHD1-203ENST00000505657 ADMP35318 185 aa6.58□□□□□ -1.36
CHD1-203ENST00000505657 GRIK1P39086 918 aa6.58□□□□□ -1.36
CHD1-203ENST00000505657 HNRNPUQ00839 825 aaKnown RBP eCLIP6.58□□□□□ -1.36
CHD1-203ENST00000505657 PWP1Q13610 501 aa6.58□□□□□ -1.36
CHD1-203ENST00000505657 NFKBIBQ15653 356 aa6.58□□□□□ -1.36
CHD1-203ENST00000505657 ZBTB37Q5TC79 503 aa6.58□□□□□ -1.36
CHD1-203ENST00000505657 INTS5Q6P9B9 1019 aaKnown RBP6.58□□□□□ -1.36
CHD1-203ENST00000505657 SEZ6L2Q6UXD5 910 aa6.58□□□□□ -1.36
CHD1-203ENST00000505657 DTX1Q86Y01 620 aa6.58□□□□□ -1.36
CHD1-203ENST00000505657 SMYD4Q8IYR2 804 aaPredicted RBP6.58□□□□□ -1.36
CHD1-203ENST00000505657 RNF214Q8ND24 703 aa6.58□□□□□ -1.36
CHD1-203ENST00000505657 KCNQ5Q9NR82 932 aa6.58□□□□□ -1.36
CHD1-203ENST00000505657 PRKAG2Q9UGJ0 569 aa6.58□□□□□ -1.36
CHD1-203ENST00000505657 CILPO75339 1184 aa6.57□□□□□ -1.36
CHD1-203ENST00000505657 EIF4A3P38919 411 aaKnown RBP6.57□□□□□ -1.36
CHD1-203ENST00000505657 CRKP46108 304 aa6.57□□□□□ -1.36
CHD1-203ENST00000505657 RPL6Q02878 288 aaKnown RBP6.57□□□□□ -1.36
CHD1-203ENST00000505657 USP48Q86UV5 1035 aa6.57□□□□□ -1.36
CHD1-203ENST00000505657 ZNF296Q8WUU4 475 aaPredicted RBP6.57□□□□□ -1.36
CHD1-203ENST00000505657 GATAD2BQ8WXI9 593 aa6.57□□□□□ -1.36
CHD1-203ENST00000505657 GATA6Q92908 595 aa6.57□□□□□ -1.36
CHD1-203ENST00000505657 MFSD14AQ96MC6 490 aa6.57□□□□□ -1.36
CHD1-203ENST00000505657 FBRSQ9HAH7 460 aa6.57□□□□□ -1.36
CHD1-203ENST00000505657 C1GALT1Q9NS00 363 aa6.57□□□□□ -1.36
CHD1-203ENST00000505657 SNCAIPQ9Y6H5 919 aa6.57□□□□□ -1.36
CHD1-203ENST00000505657 TLR3O15455 904 aaKnown RBP6.56□□□□□ -1.36
CHD1-203ENST00000505657 WNT11O96014 354 aa6.56□□□□□ -1.36
CHD1-203ENST00000505657 CDK5R2Q13319 367 aa6.56□□□□□ -1.36
CHD1-203ENST00000505657 RNF43Q68DV7 783 aa6.56□□□□□ -1.36
CHD1-203ENST00000505657 PAOXQ6QHF9 649 aa6.56□□□□□ -1.36
CHD1-203ENST00000505657 HDXQ7Z353 690 aa6.56□□□□□ -1.36
CHD1-203ENST00000505657 CCDC84Q86UT8 332 aaPredicted RBP6.56□□□□□ -1.36
CHD1-203ENST00000505657 NT5DC4Q86YG4 428 aa6.56□□□□□ -1.36
CHD1-203ENST00000505657 YIPF2Q9BWQ6 316 aa6.56□□□□□ -1.36
CHD1-203ENST00000505657 PICK1Q9NRD5 415 aa6.56□□□□□ -1.36
CHD1-203ENST00000505657 ADGRE2Q9UHX3 823 aa6.56□□□□□ -1.36
CHD1-203ENST00000505657 DDX41Q9UJV9 622 aaKnown RBP6.56□□□□□ -1.36
CHD1-203ENST00000505657 POLR3KQ9Y2Y1 108 aaPredicted RBP6.56□□□□□ -1.36
CHD1-203ENST00000505657 CORINQ9Y5Q5 1042 aa6.56□□□□□ -1.36
CHD1-203ENST00000505657 RBAK-RBAKDNI3L0D1 243 aa6.55□□□□□ -1.36
CHD1-203ENST00000505657 GREM1O60565 184 aa6.55□□□□□ -1.36
CHD1-203ENST00000505657 GRK4P32298 578 aa6.55□□□□□ -1.36
CHD1-203ENST00000505657 RAD51AP2Q09MP3 1159 aa6.55□□□□□ -1.36
CHD1-203ENST00000505657 MAP7Q14244 749 aa6.55□□□□□ -1.36
CHD1-203ENST00000505657 FAM196AQ6ZSG2 479 aa6.55□□□□□ -1.36
CHD1-203ENST00000505657 EAF1Q96JC9 268 aaPredicted RBP6.55□□□□□ -1.36
CHD1-203ENST00000505657 WNT10AQ9GZT5 417 aa6.55□□□□□ -1.36
CHD1-203ENST00000505657 UBP1Q9NZI7 540 aa6.55□□□□□ -1.36
CHD1-203ENST00000505657 FANCGO15287 622 aa6.54□□□□□ -1.36
CHD1-203ENST00000505657 F13BP05160 661 aa6.54□□□□□ -1.36
CHD1-203ENST00000505657 NKG7Q16617 165 aa6.54□□□□□ -1.36
CHD1-203ENST00000505657 FBXL6Q8N531 539 aa6.54□□□□□ -1.36
CHD1-203ENST00000505657 SHKBP1Q8TBC3 707 aa6.54□□□□□ -1.36
CHD1-203ENST00000505657 TBC1D32Q96NH3 1257 aa6.54□□□□□ -1.36
CHD1-203ENST00000505657 DBNDD2Q9BQY9 259 aa6.54□□□□□ -1.36
CHD1-203ENST00000505657 PCOLCE2Q9UKZ9 415 aa6.54□□□□□ -1.36
CHD1-203ENST00000505657 SUPT16HQ9Y5B9 1047 aaKnown RBP6.54□□□□□ -1.36
CHD1-203ENST00000505657 FAM170BA6NMN3 283 aa6.53□□□□□ -1.36
CHD1-203ENST00000505657 GRIN3BO60391 1043 aa6.53□□□□□ -1.36
CHD1-203ENST00000505657 BPNT1O95861 308 aa6.53□□□□□ -1.36
CHD1-203ENST00000505657 ETF1P62495 437 aaKnown RBP6.53□□□□□ -1.36
CHD1-203ENST00000505657 MPP2Q14168 576 aa6.53□□□□□ -1.36
CHD1-203ENST00000505657 REC114Q7Z4M0 266 aa6.53□□□□□ -1.36
CHD1-203ENST00000505657 ZAR1Q86SH2 424 aa6.53□□□□□ -1.36
CHD1-203ENST00000505657 KIAA0825Q8IV33 1275 aa6.53□□□□□ -1.36
CHD1-203ENST00000505657 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.53□□□□□ -1.36
CHD1-203ENST00000505657 SPON2Q9BUD6 331 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms