RNA–Protein interactions for RNA: ENST00000505551.5

LETM1-203, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-203ENST00000505551 SMARCC1Q92922 1105 aaPredicted RBP15.08■□□□□ 0.01
LETM1-203ENST00000505551 FAXDC2Q96IV6 333 aa15.08■□□□□ 0.01
LETM1-203ENST00000505551 DCAF5Q96JK2 942 aa15.08■□□□□ 0.01
LETM1-203ENST00000505551 RBM28Q9NW13 759 aaKnown RBP15.08■□□□□ 0.01
LETM1-203ENST00000505551 TUBE1Q9UJT0 475 aa15.08■□□□□ 0.01
LETM1-203ENST00000505551 RPS6KL1Q9Y6S9 549 aa15.08■□□□□ 0.01
LETM1-203ENST00000505551 CCDC175P0C221 793 aa15.08■□□□□ 0
LETM1-203ENST00000505551 FNTAP49354 379 aa15.08■□□□□ 0
LETM1-203ENST00000505551 PTPN21Q16825 1174 aa15.08■□□□□ 0
LETM1-203ENST00000505551 USPL1Q5W0Q7 1092 aa15.08■□□□□ 0
LETM1-203ENST00000505551 Q6ZUG5 572 aa15.08■□□□□ 0
LETM1-203ENST00000505551 HPCAL4Q9UM19 191 aa15.08■□□□□ 0
LETM1-203ENST00000505551 MTMR7Q9Y216 660 aa15.08■□□□□ 0
LETM1-203ENST00000505551 ZNF202O95125 648 aa15.08■□□□□ 0
LETM1-203ENST00000505551 CTDNEP1O95476 244 aa15.08■□□□□ 0
LETM1-203ENST00000505551 ZCRB1Q8TBF4 217 aaKnown RBP15.08■□□□□ 0
LETM1-203ENST00000505551 SUCLG2Q96I99 432 aa15.08■□□□□ 0
LETM1-203ENST00000505551 PTPDC1A2A3K4 754 aa15.07■□□□□ 0
LETM1-203ENST00000505551 ALDH1L1O75891 902 aa15.07■□□□□ 0
LETM1-203ENST00000505551 IGKV5-2P06315 115 aa15.07■□□□□ 0
LETM1-203ENST00000505551 IRAK1P51617 712 aa15.07■□□□□ 0
LETM1-203ENST00000505551 FOSBP53539 338 aa15.07■□□□□ 0
LETM1-203ENST00000505551 WHAMMP3Q1A5X7 153 aa15.07■□□□□ 0
LETM1-203ENST00000505551 KAT14Q9H8E8 782 aa15.07■□□□□ 0
LETM1-203ENST00000505551 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.07■□□□□ 0
LETM1-203ENST00000505551 SALL1Q9NSC2 1324 aa15.07■□□□□ 0
LETM1-203ENST00000505551 KIF1AQ12756 1690 aa15.07■□□□□ 0
LETM1-203ENST00000505551 ALS2Q96Q42 1657 aa15.07■□□□□ 0
LETM1-203ENST00000505551 NCAPD2Q15021 1401 aa15.07■□□□□ 0
LETM1-203ENST00000505551 CTAGE15A4D2H0 777 aa15.07■□□□□ 0
LETM1-203ENST00000505551 CTAGE8P0CG41 777 aa15.07■□□□□ 0
LETM1-203ENST00000505551 C1QTNF12Q5T7M4 302 aa15.07■□□□□ 0
LETM1-203ENST00000505551 CTAGE6Q86UF2 777 aa15.07■□□□□ 0
LETM1-203ENST00000505551 CTAGE4Q8IX94 777 aa15.07■□□□□ 0
LETM1-203ENST00000505551 AMOTL1Q8IY63 956 aa15.07■□□□□ 0
LETM1-203ENST00000505551 KCNG4Q8TDN1 519 aa15.07■□□□□ 0
LETM1-203ENST00000505551 NEK1Q96PY6 1258 aa15.07■□□□□ 0
LETM1-203ENST00000505551 KIF5CO60282 957 aa15.06■□□□□ 0
LETM1-203ENST00000505551 PREPLQ4J6C6 727 aaPredicted RBP15.06■□□□□ 0
LETM1-203ENST00000505551 FANCLQ9NW38 375 aa15.06■□□□□ 0
LETM1-203ENST00000505551 RAD21O60216 631 aa15.06■□□□□ 0
LETM1-203ENST00000505551 FSBPO95073 299 aa15.06■□□□□ 0
LETM1-203ENST00000505551 YEATS4O95619 227 aa15.06■□□□□ 0
LETM1-203ENST00000505551 DDX58O95786 925 aaKnown RBP15.06■□□□□ 0
LETM1-203ENST00000505551 SNRPA1P09661 255 aaKnown RBP15.06■□□□□ 0
LETM1-203ENST00000505551 ADKP55263 362 aaKnown RBP15.06■□□□□ 0
LETM1-203ENST00000505551 SPECC1LQ69YQ0 1117 aa15.06■□□□□ 0
LETM1-203ENST00000505551 PDILTQ8N807 584 aa15.06■□□□□ 0
LETM1-203ENST00000505551 JMYQ8N9B5 988 aa15.06■□□□□ 0
LETM1-203ENST00000505551 ZKSCAN4Q969J2 545 aaPredicted RBP15.06■□□□□ 0
LETM1-203ENST00000505551 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.06■□□□□ 0
LETM1-203ENST00000505551 ADGRG1Q9Y653 693 aa15.06■□□□□ 0
LETM1-203ENST00000505551 DCCP43146 1447 aa15.05■□□□□ 0
LETM1-203ENST00000505551 LMTK3Q96Q04 1460 aa15.05■□□□□ 0
LETM1-203ENST00000505551 GRM8O00222 908 aa15.05■□□□□ 0
LETM1-203ENST00000505551 CHUKO15111 745 aa15.05■□□□□ 0
LETM1-203ENST00000505551 PIP4K2BP78356 416 aa15.05■□□□□ 0
LETM1-203ENST00000505551 MTF1Q14872 753 aa15.05■□□□□ 0
LETM1-203ENST00000505551 KIF4BQ2VIQ3 1234 aa15.05■□□□□ 0
LETM1-203ENST00000505551 SPTY2D1Q68D10 685 aaPredicted RBP15.05■□□□□ 0
LETM1-203ENST00000505551 KAZALD1Q96I82 304 aa15.05■□□□□ 0
LETM1-203ENST00000505551 TSPAN18Q96SJ8 248 aa15.05■□□□□ 0
LETM1-203ENST00000505551 HEG1Q9ULI3 1381 aa15.05■□□□□ -0
LETM1-203ENST00000505551 A0A0G2JS52 829 aa15.05■□□□□ -0
LETM1-203ENST00000505551 CTAGE9A4FU28 777 aa15.05■□□□□ -0
LETM1-203ENST00000505551 A1BGP04217 495 aa15.05■□□□□ -0
LETM1-203ENST00000505551 CALRP27797 417 aaKnown RBP15.05■□□□□ -0
LETM1-203ENST00000505551 STK38Q15208 465 aa15.05■□□□□ -0
LETM1-203ENST00000505551 ANKRD13DQ6ZTN6 518 aa15.05■□□□□ -0
LETM1-203ENST00000505551 ZNF589Q86UQ0 364 aaPredicted RBP15.05■□□□□ -0
LETM1-203ENST00000505551 NOA1Q8NC60 698 aaKnown RBP15.05■□□□□ -0
LETM1-203ENST00000505551 FAM76AQ8TAV0 307 aa15.05■□□□□ -0
LETM1-203ENST00000505551 LZTFL1Q9NQ48 299 aa15.05■□□□□ -0
LETM1-203ENST00000505551 CAPN7Q9Y6W3 813 aa15.05■□□□□ -0
LETM1-203ENST00000505551 LMO7Q8WWI1 1683 aa15.04■□□□□ -0
LETM1-203ENST00000505551 TAF5LO75529 589 aa15.04■□□□□ -0
LETM1-203ENST00000505551 VEZTQ9HBM0 779 aa15.04■□□□□ -0
LETM1-203ENST00000505551 POLR3EQ9NVU0 708 aa15.04■□□□□ -0
LETM1-203ENST00000505551 GRIN2DO15399 1336 aa15.04■□□□□ -0
LETM1-203ENST00000505551 WDR17Q8IZU2 1322 aa15.04■□□□□ -0
LETM1-203ENST00000505551 KAT6BQ8WYB5 2073 aa15.04■□□□□ -0
LETM1-203ENST00000505551 SHTN1A0MZ66 631 aa15.04■□□□□ -0
LETM1-203ENST00000505551 EIF3HO15372 352 aaKnown RBP eCLIP15.04■□□□□ -0
LETM1-203ENST00000505551 PPFIA1Q13136 1202 aa15.04■□□□□ -0
LETM1-203ENST00000505551 EPHA10Q5JZY3 1008 aa15.04■□□□□ -0
LETM1-203ENST00000505551 LINS1Q8NG48 757 aa15.04■□□□□ -0
LETM1-203ENST00000505551 CCDC97Q96F63 343 aaPredicted RBP15.04■□□□□ -0
LETM1-203ENST00000505551 SOS2Q07890 1332 aaPredicted RBP15.04■□□□□ -0
LETM1-203ENST00000505551 PHRF1Q9P1Y6 1649 aaKnown RBP15.04■□□□□ -0
LETM1-203ENST00000505551 TFRCP02786 760 aaKnown RBP15.03■□□□□ -0
LETM1-203ENST00000505551 PFKFB1P16118 471 aa15.03■□□□□ -0
LETM1-203ENST00000505551 GCFC2P16383 781 aaKnown RBP15.03■□□□□ -0
LETM1-203ENST00000505551 ERCC3P19447 782 aa15.03■□□□□ -0
LETM1-203ENST00000505551 SF3A1Q15459 793 aaKnown RBP15.03■□□□□ -0
LETM1-203ENST00000505551 BCAS4Q8TDM0 211 aa15.03■□□□□ -0
LETM1-203ENST00000505551 COG1Q8WTW3 980 aa15.03■□□□□ -0
LETM1-203ENST00000505551 PANX2Q96RD6 677 aa15.03■□□□□ -0
LETM1-203ENST00000505551 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.03■□□□□ -0
LETM1-203ENST00000505551 CLIC4Q9Y696 253 aa15.03■□□□□ -0
LETM1-203ENST00000505551 LAMA4Q16363 1823 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms