RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 TUBE1Q9UJT0 475 aa19.56■□□□□ 0.72
LIN54-204ENST00000505397 CDKL5O76039 1030 aa19.55■□□□□ 0.72
LIN54-204ENST00000505397 METAP2P50579 478 aaKnown RBP eCLIP19.55■□□□□ 0.72
LIN54-204ENST00000505397 ST5P78524 1137 aa19.55■□□□□ 0.72
LIN54-204ENST00000505397 PTPAQ15257 358 aa19.55■□□□□ 0.72
LIN54-204ENST00000505397 APOA5Q6Q788 366 aa19.55■□□□□ 0.72
LIN54-204ENST00000505397 FBXW7Q969H0 707 aa19.55■□□□□ 0.72
LIN54-204ENST00000505397 ALG1Q9BT22 464 aa19.55■□□□□ 0.72
LIN54-204ENST00000505397 XPO4Q9C0E2 1151 aaKnown RBP19.55■□□□□ 0.72
LIN54-204ENST00000505397 IQSEC3Q9UPP2 1182 aaPredicted RBP19.55■□□□□ 0.72
LIN54-204ENST00000505397 IKBKBO14920 756 aa19.55■□□□□ 0.72
LIN54-204ENST00000505397 APPP05067 770 aa19.55■□□□□ 0.72
LIN54-204ENST00000505397 ZRSR1Q15695 479 aaKnown RBP19.55■□□□□ 0.72
LIN54-204ENST00000505397 NTRK3Q16288 839 aa19.55■□□□□ 0.72
LIN54-204ENST00000505397 IGDCC4Q8TDY8 1250 aa19.55■□□□□ 0.72
LIN54-204ENST00000505397 TMEM87BQ96K49 555 aa19.55■□□□□ 0.72
LIN54-204ENST00000505397 AIFM3Q96NN9 605 aa19.55■□□□□ 0.72
LIN54-204ENST00000505397 ECM29Q5VYK3 1845 aa19.55■□□□□ 0.72
LIN54-204ENST00000505397 CDC27P30260 824 aa19.54■□□□□ 0.72
LIN54-204ENST00000505397 KCNJ6P48051 423 aa19.54■□□□□ 0.72
LIN54-204ENST00000505397 ALX1Q15699 326 aa19.54■□□□□ 0.72
LIN54-204ENST00000505397 KRT40Q6A162 431 aa19.54■□□□□ 0.72
LIN54-204ENST00000505397 SGMS1Q86VZ5 419 aa19.54■□□□□ 0.72
LIN54-204ENST00000505397 MAP3K14Q99558 947 aa19.54■□□□□ 0.72
LIN54-204ENST00000505397 ZSCAN20P17040 1043 aaPredicted RBP19.54■□□□□ 0.72
LIN54-204ENST00000505397 PRR5LQ6MZQ0 368 aa19.54■□□□□ 0.72
LIN54-204ENST00000505397 FEZ1Q99689 392 aa19.54■□□□□ 0.72
LIN54-204ENST00000505397 HSD3B7Q9H2F3 369 aa19.54■□□□□ 0.72
LIN54-204ENST00000505397 U2AF2P26368 475 aaKnown RBP eCLIP19.53■□□□□ 0.72
LIN54-204ENST00000505397 CBX1P83916 185 aa19.53■□□□□ 0.72
LIN54-204ENST00000505397 CCDC150Q8NCX0 1101 aa19.53■□□□□ 0.72
LIN54-204ENST00000505397 IFNKQ9P0W0 207 aa19.53■□□□□ 0.72
LIN54-204ENST00000505397 DHX8Q14562 1220 aaKnown RBP19.53■□□□□ 0.72
LIN54-204ENST00000505397 ARMCX5Q6P1M9 558 aa19.53■□□□□ 0.72
LIN54-204ENST00000505397 SHC4Q6S5L8 630 aa19.53■□□□□ 0.72
LIN54-204ENST00000505397 SENP2Q9HC62 589 aa19.53■□□□□ 0.72
LIN54-204ENST00000505397 FAM217BQ9NTX9 383 aaPredicted RBP19.53■□□□□ 0.72
LIN54-204ENST00000505397 ABCF2Q9UG63 623 aa19.53■□□□□ 0.72
LIN54-204ENST00000505397 TM4SF1P30408 202 aa19.53■□□□□ 0.72
LIN54-204ENST00000505397 GRAPQ13588 217 aa19.53■□□□□ 0.72
LIN54-204ENST00000505397 GRAPLQ8TC17 118 aaPredicted RBP19.53■□□□□ 0.72
LIN54-204ENST00000505397 RPGRQ92834 1020 aaKnown RBP19.53■□□□□ 0.72
LIN54-204ENST00000505397 PKNOX2Q96KN3 472 aa19.53■□□□□ 0.72
LIN54-204ENST00000505397 STRBPQ96SI9 672 aaKnown RBP19.53■□□□□ 0.72
LIN54-204ENST00000505397 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.53■□□□□ 0.72
LIN54-204ENST00000505397 KIF2AO00139 706 aaPredicted RBP19.52■□□□□ 0.72
LIN54-204ENST00000505397 SERPINB2P05120 415 aa19.52■□□□□ 0.72
LIN54-204ENST00000505397 MARCKSP29966 332 aaPredicted RBP19.52■□□□□ 0.72
LIN54-204ENST00000505397 LY9Q9HBG7 655 aa19.52■□□□□ 0.72
LIN54-204ENST00000505397 B4E1Z4 1266 aa19.52■□□□□ 0.71
LIN54-204ENST00000505397 BIN1O00499 593 aa19.52■□□□□ 0.71
LIN54-204ENST00000505397 MBD4O95243 580 aa19.52■□□□□ 0.71
LIN54-204ENST00000505397 RXRBP28702 533 aa19.52■□□□□ 0.71
LIN54-204ENST00000505397 SYKP43405 635 aa19.52■□□□□ 0.71
LIN54-204ENST00000505397 TPM4P67936 248 aa19.52■□□□□ 0.71
LIN54-204ENST00000505397 NAA30Q147X3 362 aaPredicted RBP19.52■□□□□ 0.71
LIN54-204ENST00000505397 E4F1Q66K89 784 aaPredicted RBP19.52■□□□□ 0.71
LIN54-204ENST00000505397 FAM84BQ96KN1 310 aaPredicted RBP19.52■□□□□ 0.71
LIN54-204ENST00000505397 CGNQ9P2M7 1197 aaKnown RBP19.52■□□□□ 0.71
LIN54-204ENST00000505397 WTIPA6NIX2 430 aaPredicted RBP19.51■□□□□ 0.71
LIN54-204ENST00000505397 APBA3O96018 575 aa19.51■□□□□ 0.71
LIN54-204ENST00000505397 UTP14CQ5TAP6 766 aaKnown RBP19.51■□□□□ 0.71
LIN54-204ENST00000505397 RESP18Q5W5W9 173 aa19.51■□□□□ 0.71
LIN54-204ENST00000505397 CPLX2Q6PUV4 134 aaKnown RBP19.51■□□□□ 0.71
LIN54-204ENST00000505397 JMYQ8N9B5 988 aa19.51■□□□□ 0.71
LIN54-204ENST00000505397 ZNF592Q92610 1267 aa19.51■□□□□ 0.71
LIN54-204ENST00000505397 TRMT1Q9NXH9 659 aaKnown RBP19.51■□□□□ 0.71
LIN54-204ENST00000505397 TFCP2L1Q9NZI6 479 aa19.51■□□□□ 0.71
LIN54-204ENST00000505397 NID2Q14112 1375 aa19.51■□□□□ 0.71
LIN54-204ENST00000505397 SEMA3EO15041 775 aa19.51■□□□□ 0.71
LIN54-204ENST00000505397 RANBP6O60518 1105 aaKnown RBP19.51■□□□□ 0.71
LIN54-204ENST00000505397 LIFRP42702 1097 aa19.51■□□□□ 0.71
LIN54-204ENST00000505397 PROM2Q8N271 834 aa19.51■□□□□ 0.71
LIN54-204ENST00000505397 RAI14Q9P0K7 980 aa19.51■□□□□ 0.71
LIN54-204ENST00000505397 STK36Q9NRP7 1315 aa19.5■□□□□ 0.71
LIN54-204ENST00000505397 PSDA5PKW4 1024 aaPredicted RBP19.5■□□□□ 0.71
LIN54-204ENST00000505397 PLSCR1O15162 318 aa19.5■□□□□ 0.71
LIN54-204ENST00000505397 ZBTB43O43298 467 aa19.5■□□□□ 0.71
LIN54-204ENST00000505397 SMC2O95347 1197 aa19.5■□□□□ 0.71
LIN54-204ENST00000505397 DMTNQ08495 405 aa19.5■□□□□ 0.71
LIN54-204ENST00000505397 TMC6Q7Z403 805 aa19.5■□□□□ 0.71
LIN54-204ENST00000505397 PHKBQ93100 1093 aa19.5■□□□□ 0.71
LIN54-204ENST00000505397 TIAM2Q8IVF5 1701 aa19.5■□□□□ 0.71
LIN54-204ENST00000505397 RXRAP19793 462 aa19.5■□□□□ 0.71
LIN54-204ENST00000505397 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.5■□□□□ 0.71
LIN54-204ENST00000505397 ANKIB1Q9P2G1 1089 aa19.5■□□□□ 0.71
LIN54-204ENST00000505397 COL1A1P02452 1464 aaPredicted RBP19.49■□□□□ 0.71
LIN54-204ENST00000505397 GNAT2P19087 354 aa19.49■□□□□ 0.71
LIN54-204ENST00000505397 HIBADHP31937 336 aaKnown RBP19.49■□□□□ 0.71
LIN54-204ENST00000505397 KIF18AQ8NI77 898 aa19.49■□□□□ 0.71
LIN54-204ENST00000505397 PATL2C9JE40 543 aaKnown RBP19.49■□□□□ 0.71
LIN54-204ENST00000505397 IARSP41252 1262 aaKnown RBP19.49■□□□□ 0.71
LIN54-204ENST00000505397 FANCCQ00597 558 aa19.49■□□□□ 0.71
LIN54-204ENST00000505397 FBXO33Q7Z6M2 555 aa19.49■□□□□ 0.71
LIN54-204ENST00000505397 ELOA2Q8IYF1 753 aaPredicted RBP19.49■□□□□ 0.71
LIN54-204ENST00000505397 NAPBQ9H115 298 aa19.49■□□□□ 0.71
LIN54-204ENST00000505397 ARMT1Q9H993 441 aa19.49■□□□□ 0.71
LIN54-204ENST00000505397 PRDM10Q9NQV6 1147 aa19.49■□□□□ 0.71
LIN54-204ENST00000505397 CHD4Q14839 1912 aa19.48■□□□□ 0.71
LIN54-204ENST00000505397 MICU3Q86XE3 530 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms