RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 VGLL2Q8N8G2 317 aa13.62□□□□□ -0.23
UBE3D-206ENST00000505226 STRBPQ96SI9 672 aaKnown RBP13.62□□□□□ -0.23
UBE3D-206ENST00000505226 SOWAHDA6NJG2 315 aa13.62□□□□□ -0.23
UBE3D-206ENST00000505226 PHKA1P46020 1223 aa13.62□□□□□ -0.23
UBE3D-206ENST00000505226 GYS2P54840 703 aa13.62□□□□□ -0.23
UBE3D-206ENST00000505226 NR1I3Q14994 352 aa13.62□□□□□ -0.23
UBE3D-206ENST00000505226 APTXQ7Z2E3 356 aaKnown RBP13.62□□□□□ -0.23
UBE3D-206ENST00000505226 SMARCE1Q969G3 411 aa13.62□□□□□ -0.23
UBE3D-206ENST00000505226 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.62□□□□□ -0.23
UBE3D-206ENST00000505226 FBXO3Q9UK99 471 aa13.62□□□□□ -0.23
UBE3D-206ENST00000505226 ATRNO75882 1429 aa13.62□□□□□ -0.23
UBE3D-206ENST00000505226 PDE6AP16499 860 aa13.61□□□□□ -0.23
UBE3D-206ENST00000505226 PTPREP23469 700 aa13.61□□□□□ -0.23
UBE3D-206ENST00000505226 LDHAL6AQ6ZMR3 332 aa13.61□□□□□ -0.23
UBE3D-206ENST00000505226 TTLL11Q8NHH1 800 aa13.61□□□□□ -0.23
UBE3D-206ENST00000505226 ZBTB9Q96C00 473 aa13.61□□□□□ -0.23
UBE3D-206ENST00000505226 FUT8Q9BYC5 575 aa13.61□□□□□ -0.23
UBE3D-206ENST00000505226 PARP4Q9UKK3 1724 aaKnown RBP13.61□□□□□ -0.23
UBE3D-206ENST00000505226 MYO1BO43795 1136 aa13.61□□□□□ -0.23
UBE3D-206ENST00000505226 FMNL1O95466 1100 aaPredicted RBP13.61□□□□□ -0.23
UBE3D-206ENST00000505226 MMP1P03956 469 aa13.61□□□□□ -0.23
UBE3D-206ENST00000505226 PCCAP05165 728 aaPredicted RBP13.61□□□□□ -0.23
UBE3D-206ENST00000505226 CAPN2P17655 700 aa13.61□□□□□ -0.23
UBE3D-206ENST00000505226 CDK11BP21127 795 aaKnown RBP13.61□□□□□ -0.23
UBE3D-206ENST00000505226 ITGA6P23229 1130 aa13.61□□□□□ -0.23
UBE3D-206ENST00000505226 OAS2P29728 719 aaKnown RBP13.61□□□□□ -0.23
UBE3D-206ENST00000505226 DIS3L2Q8IYB7 885 aaKnown RBP13.61□□□□□ -0.23
UBE3D-206ENST00000505226 GPR161Q8N6U8 529 aaKnown RBP13.61□□□□□ -0.23
UBE3D-206ENST00000505226 ZCRB1Q8TBF4 217 aaKnown RBP13.61□□□□□ -0.23
UBE3D-206ENST00000505226 ENOX1Q8TC92 643 aaKnown RBP13.61□□□□□ -0.23
UBE3D-206ENST00000505226 OXER1Q8TDS5 423 aa13.61□□□□□ -0.23
UBE3D-206ENST00000505226 SHISA4Q96DD7 197 aa13.61□□□□□ -0.23
UBE3D-206ENST00000505226 TMEM87BQ96K49 555 aa13.61□□□□□ -0.23
UBE3D-206ENST00000505226 TRERF1Q96PN7 1200 aa13.61□□□□□ -0.23
UBE3D-206ENST00000505226 ZKSCAN3Q9BRR0 538 aa13.61□□□□□ -0.23
UBE3D-206ENST00000505226 ZSWIM4Q9H7M6 989 aa13.61□□□□□ -0.23
UBE3D-206ENST00000505226 ABCC12Q96J65 1359 aa13.61□□□□□ -0.23
UBE3D-206ENST00000505226 ZNF142P52746 1687 aaPredicted RBP13.61□□□□□ -0.23
UBE3D-206ENST00000505226 ACTN4O43707 911 aaKnown RBP13.61□□□□□ -0.23
UBE3D-206ENST00000505226 TFRCP02786 760 aaKnown RBP13.61□□□□□ -0.23
UBE3D-206ENST00000505226 CASP1P29466 404 aa13.61□□□□□ -0.23
UBE3D-206ENST00000505226 TRIM29Q14134 588 aa13.61□□□□□ -0.23
UBE3D-206ENST00000505226 PLA2G12BQ9BX93 195 aa13.61□□□□□ -0.23
UBE3D-206ENST00000505226 A0A087X0B3 334 aa13.6□□□□□ -0.23
UBE3D-206ENST00000505226 SSRP1Q08945 709 aaKnown RBP13.6□□□□□ -0.23
UBE3D-206ENST00000505226 SMC1AQ14683 1233 aaKnown RBP13.6□□□□□ -0.23
UBE3D-206ENST00000505226 UBE3CQ15386 1083 aa13.6□□□□□ -0.23
UBE3D-206ENST00000505226 HLFQ16534 295 aa13.6□□□□□ -0.23
UBE3D-206ENST00000505226 RAD9BQ6WBX8 426 aa13.6□□□□□ -0.23
UBE3D-206ENST00000505226 ELOA2Q8IYF1 753 aaPredicted RBP13.6□□□□□ -0.23
UBE3D-206ENST00000505226 ZBTB38Q8NAP3 1195 aaPredicted RBP13.6□□□□□ -0.23
UBE3D-206ENST00000505226 ERVV-2B6SEH9 535 aa13.6□□□□□ -0.23
UBE3D-206ENST00000505226 SNAP23O00161 211 aa13.6□□□□□ -0.23
UBE3D-206ENST00000505226 GPTP24298 496 aa13.6□□□□□ -0.23
UBE3D-206ENST00000505226 TRIM28Q13263 835 aaKnown RBP13.6□□□□□ -0.23
UBE3D-206ENST00000505226 CPLX2Q6PUV4 134 aaKnown RBP13.6□□□□□ -0.23
UBE3D-206ENST00000505226 CREBRFQ8IUR6 639 aa13.6□□□□□ -0.23
UBE3D-206ENST00000505226 SLC12A7Q9Y666 1083 aa13.6□□□□□ -0.23
UBE3D-206ENST00000505226 TULP2O00295 520 aa13.59□□□□□ -0.23
UBE3D-206ENST00000505226 IFIT3O14879 490 aaKnown RBP13.59□□□□□ -0.23
UBE3D-206ENST00000505226 CD44P16070 742 aaKnown RBP13.59□□□□□ -0.23
UBE3D-206ENST00000505226 ATP2B1P20020 1258 aa13.59□□□□□ -0.23
UBE3D-206ENST00000505226 MLKLQ8NB16 471 aa13.59□□□□□ -0.23
UBE3D-206ENST00000505226 RAI14Q9P0K7 980 aa13.59□□□□□ -0.23
UBE3D-206ENST00000505226 LRP6O75581 1613 aa13.59□□□□□ -0.23
UBE3D-206ENST00000505226 FAM205CA6NFA0 338 aa13.59□□□□□ -0.23
UBE3D-206ENST00000505226 PRKAB2O43741 272 aa13.59□□□□□ -0.23
UBE3D-206ENST00000505226 ABL1P00519 1130 aa13.59□□□□□ -0.23
UBE3D-206ENST00000505226 LIFRP42702 1097 aa13.59□□□□□ -0.23
UBE3D-206ENST00000505226 IFNL3Q8IZI9 196 aa13.59□□□□□ -0.23
UBE3D-206ENST00000505226 SPATA20Q8TB22 786 aa13.59□□□□□ -0.23
UBE3D-206ENST00000505226 LZTFL1Q9NQ48 299 aa13.59□□□□□ -0.23
UBE3D-206ENST00000505226 CALCOCO1Q9P1Z2 691 aa13.59□□□□□ -0.23
UBE3D-206ENST00000505226 PCDH11XQ9BZA7 1347 aa13.59□□□□□ -0.23
UBE3D-206ENST00000505226 PCDH11YQ9BZA8 1340 aa13.59□□□□□ -0.23
UBE3D-206ENST00000505226 A0A1B0GTH6 734 aa13.59□□□□□ -0.23
UBE3D-206ENST00000505226 H3BQF6 201 aa13.59□□□□□ -0.23
UBE3D-206ENST00000505226 TPM1P09493 284 aa13.59□□□□□ -0.23
UBE3D-206ENST00000505226 IFNAR1P17181 557 aa13.59□□□□□ -0.23
UBE3D-206ENST00000505226 GTF2E1P29083 439 aaPredicted RBP13.59□□□□□ -0.23
UBE3D-206ENST00000505226 HELBQ8NG08 1087 aaPredicted RBP13.59□□□□□ -0.23
UBE3D-206ENST00000505226 CSRNP2Q9H175 543 aa13.59□□□□□ -0.23
UBE3D-206ENST00000505226 STK36Q9NRP7 1315 aa13.58□□□□□ -0.23
UBE3D-206ENST00000505226 ATP8B1O43520 1251 aa13.58□□□□□ -0.24
UBE3D-206ENST00000505226 RBL2Q08999 1139 aa13.58□□□□□ -0.24
UBE3D-206ENST00000505226 CCDC12Q8WUD4 166 aaPredicted RBP13.58□□□□□ -0.24
UBE3D-206ENST00000505226 RABGGTAQ92696 567 aa13.58□□□□□ -0.24
UBE3D-206ENST00000505226 ZNF512BQ96KM6 892 aaPredicted RBP13.58□□□□□ -0.24
UBE3D-206ENST00000505226 PAPPAQ13219 1627 aa13.58□□□□□ -0.24
UBE3D-206ENST00000505226 CPLX3Q8WVH0 158 aa13.58□□□□□ -0.24
UBE3D-206ENST00000505226 ARMT1Q9H993 441 aa13.58□□□□□ -0.24
UBE3D-206ENST00000505226 TNS2Q63HR2 1409 aa13.58□□□□□ -0.24
UBE3D-206ENST00000505226 SMIM22K7EJ46 135 aa13.58□□□□□ -0.24
UBE3D-206ENST00000505226 WNT7AO00755 349 aa13.58□□□□□ -0.24
UBE3D-206ENST00000505226 COBLO75128 1261 aa13.58□□□□□ -0.24
UBE3D-206ENST00000505226 STX17P56962 302 aa13.58□□□□□ -0.24
UBE3D-206ENST00000505226 EARS2Q5JPH6 523 aaKnown RBP13.58□□□□□ -0.24
UBE3D-206ENST00000505226 NUTM2AQ8IVF1 878 aaPredicted RBP13.58□□□□□ -0.24
UBE3D-206ENST00000505226 SMYD4Q8IYR2 804 aaPredicted RBP13.58□□□□□ -0.24
UBE3D-206ENST00000505226 AIDAQ96BJ3 306 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms