RNA–Protein interactions for RNA: ENST00000503495.5

DDR1-249, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-249ENST00000503495 U2AF1L4Q8WU68 220 aaKnown RBP18.52■□□□□ 0.56
DDR1-249ENST00000503495 RAI14Q9P0K7 980 aa18.52■□□□□ 0.56
DDR1-249ENST00000503495 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.52■□□□□ 0.56
DDR1-249ENST00000503495 FAM196BA6NMK8 535 aa18.51■□□□□ 0.55
DDR1-249ENST00000503495 UQCRFS1P1P0C7P4 283 aa18.51■□□□□ 0.55
DDR1-249ENST00000503495 CAP2P40123 477 aa18.51■□□□□ 0.55
DDR1-249ENST00000503495 MCAMP43121 646 aa18.51■□□□□ 0.55
DDR1-249ENST00000503495 SPP2Q13103 211 aa18.51■□□□□ 0.55
DDR1-249ENST00000503495 FAM110CQ1W6H9 321 aa18.51■□□□□ 0.55
DDR1-249ENST00000503495 TREML2Q5T2D2 321 aa18.51■□□□□ 0.55
DDR1-249ENST00000503495 ANKRD13CQ8N6S4 541 aa18.51■□□□□ 0.55
DDR1-249ENST00000503495 ZNF280CQ8ND82 737 aa18.51■□□□□ 0.55
DDR1-249ENST00000503495 UNC93B1Q9H1C4 597 aa18.51■□□□□ 0.55
DDR1-249ENST00000503495 GPR108Q9NPR9 543 aa18.51■□□□□ 0.55
DDR1-249ENST00000503495 HERC5Q9UII4 1024 aaKnown RBP18.51■□□□□ 0.55
DDR1-249ENST00000503495 SH3D19Q5HYK7 790 aa18.5■□□□□ 0.55
DDR1-249ENST00000503495 COA7Q96BR5 231 aa18.5■□□□□ 0.55
DDR1-249ENST00000503495 LRP2BPQ9P2M1 347 aa18.5■□□□□ 0.55
DDR1-249ENST00000503495 DOCK3Q8IZD9 2030 aa18.49■□□□□ 0.55
DDR1-249ENST00000503495 USP17L5A8MUK1 530 aa18.49■□□□□ 0.55
DDR1-249ENST00000503495 IGSF3O75054 1194 aa18.49■□□□□ 0.55
DDR1-249ENST00000503495 BCAR3O75815 825 aa18.49■□□□□ 0.55
DDR1-249ENST00000503495 ELNP15502 786 aa18.49■□□□□ 0.55
DDR1-249ENST00000503495 GCLCP48506 637 aaPredicted RBP18.49■□□□□ 0.55
DDR1-249ENST00000503495 PABPC4Q13310 644 aaKnown RBP eCLIP18.49■□□□□ 0.55
DDR1-249ENST00000503495 TEX11Q8IYF3 940 aa18.49■□□□□ 0.55
DDR1-249ENST00000503495 FRAT1Q92837 279 aaPredicted RBP18.49■□□□□ 0.55
DDR1-249ENST00000503495 DHX36Q9H2U1 1008 aaKnown RBP18.49■□□□□ 0.55
DDR1-249ENST00000503495 PI4KBQ9UBF8 816 aa18.49■□□□□ 0.55
DDR1-249ENST00000503495 TNNQ9UQP3 1299 aa18.49■□□□□ 0.55
DDR1-249ENST00000503495 INHAP05111 366 aa18.48■□□□□ 0.55
DDR1-249ENST00000503495 PPP4CP60510 307 aa18.48■□□□□ 0.55
DDR1-249ENST00000503495 RRP1BQ14684 758 aaKnown RBP18.48■□□□□ 0.55
DDR1-249ENST00000503495 CHRDL2Q6WN34 429 aa18.48■□□□□ 0.55
DDR1-249ENST00000503495 NOL10Q9BSC4 688 aaKnown RBP18.48■□□□□ 0.55
DDR1-249ENST00000503495 PAK6Q9NQU5 681 aaPredicted RBP18.48■□□□□ 0.55
DDR1-249ENST00000503495 NR2E3Q9Y5X4 410 aa18.48■□□□□ 0.55
DDR1-249ENST00000503495 ATAD5Q96QE3 1844 aa18.48■□□□□ 0.55
DDR1-249ENST00000503495 LOC285556D6RIA3 1793 aa18.47■□□□□ 0.55
DDR1-249ENST00000503495 FARP2O94887 1054 aaPredicted RBP18.47■□□□□ 0.55
DDR1-249ENST00000503495 BAG3O95817 575 aa18.47■□□□□ 0.55
DDR1-249ENST00000503495 HMGCS2P54868 508 aa18.47■□□□□ 0.55
DDR1-249ENST00000503495 POLA2Q14181 598 aa18.47■□□□□ 0.55
DDR1-249ENST00000503495 METTL16Q86W50 562 aaKnown RBP18.47■□□□□ 0.55
DDR1-249ENST00000503495 SH3RF3Q8TEJ3 882 aaPredicted RBP18.47■□□□□ 0.55
DDR1-249ENST00000503495 CLUAP1Q96AJ1 413 aa18.47■□□□□ 0.55
DDR1-249ENST00000503495 WDR18Q9BV38 432 aa18.47■□□□□ 0.55
DDR1-249ENST00000503495 AS3MTQ9HBK9 375 aa18.47■□□□□ 0.55
DDR1-249ENST00000503495 RBM27Q9P2N5 1060 aaKnown RBP18.47■□□□□ 0.55
DDR1-249ENST00000503495 CEP290O15078 2479 aa18.47■□□□□ 0.55
DDR1-249ENST00000503495 TFRCP02786 760 aaKnown RBP18.46■□□□□ 0.55
DDR1-249ENST00000503495 PLCG2P16885 1265 aa18.46■□□□□ 0.55
DDR1-249ENST00000503495 ATP8B2P98198 1209 aa18.46■□□□□ 0.55
DDR1-249ENST00000503495 CCDC158Q5M9N0 1113 aa18.46■□□□□ 0.55
DDR1-249ENST00000503495 NAA16Q6N069 864 aaPredicted RBP18.46■□□□□ 0.55
DDR1-249ENST00000503495 FOXP4Q8IVH2 680 aaPredicted RBP18.46■□□□□ 0.55
DDR1-249ENST00000503495 SSH3Q8TE77 659 aa18.46■□□□□ 0.55
DDR1-249ENST00000503495 ZNF512BQ96KM6 892 aaPredicted RBP18.46■□□□□ 0.55
DDR1-249ENST00000503495 DEFB118Q96PH6 123 aa18.46■□□□□ 0.55
DDR1-249ENST00000503495 CRISPLD2Q9H0B8 497 aa18.46■□□□□ 0.55
DDR1-249ENST00000503495 PRO3102Q9H379 93 aa18.46■□□□□ 0.55
DDR1-249ENST00000503495 ASNSP08243 561 aa18.45■□□□□ 0.54
DDR1-249ENST00000503495 TNNI3KQ59H18 835 aa18.45■□□□□ 0.54
DDR1-249ENST00000503495 ZKSCAN2Q63HK3 967 aa18.45■□□□□ 0.54
DDR1-249ENST00000503495 ASCC2Q9H1I8 757 aaPredicted RBP18.45■□□□□ 0.54
DDR1-249ENST00000503495 AATFQ9NY61 560 aaKnown RBP eCLIP18.45■□□□□ 0.54
DDR1-249ENST00000503495 GJD2Q9UKL4 321 aa18.45■□□□□ 0.54
DDR1-249ENST00000503495 FPGT-TNNI3KV9GXZ4 949 aa18.45■□□□□ 0.54
DDR1-249ENST00000503495 ZBTB7BO15156 539 aaPredicted RBP18.44■□□□□ 0.54
DDR1-249ENST00000503495 CYP2E1P05181 493 aaPredicted RBP18.44■□□□□ 0.54
DDR1-249ENST00000503495 HOXA7P31268 230 aaPredicted RBP18.44■□□□□ 0.54
DDR1-249ENST00000503495 TTC39AQ5SRH9 613 aa18.44■□□□□ 0.54
DDR1-249ENST00000503495 TMEM57Q8N5G2 664 aa18.44■□□□□ 0.54
DDR1-249ENST00000503495 DBNDD2Q9BQY9 259 aa18.44■□□□□ 0.54
DDR1-249ENST00000503495 SNRKQ9NRH2 765 aa18.44■□□□□ 0.54
DDR1-249ENST00000503495 GINM1Q9NU53 330 aa18.44■□□□□ 0.54
DDR1-249ENST00000503495 MORF4L1Q9UBU8 362 aa18.44■□□□□ 0.54
DDR1-249ENST00000503495 C19orf81C9J6K1 198 aa18.43■□□□□ 0.54
DDR1-249ENST00000503495 BACE1P56817 501 aa18.43■□□□□ 0.54
DDR1-249ENST00000503495 TGFBRAP1Q8WUH2 860 aa18.43■□□□□ 0.54
DDR1-249ENST00000503495 TAOK2Q9UL54 1235 aa18.43■□□□□ 0.54
DDR1-249ENST00000503495 SIPA1L1O43166 1804 aa18.43■□□□□ 0.54
DDR1-249ENST00000503495 ADGRA1Q86SQ6 560 aa18.42■□□□□ 0.54
DDR1-249ENST00000503495 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.42■□□□□ 0.54
DDR1-249ENST00000503495 DNAJC18Q9H819 358 aa18.42■□□□□ 0.54
DDR1-249ENST00000503495 NOP58Q9Y2X3 529 aaKnown RBP18.42■□□□□ 0.54
DDR1-249ENST00000503495 FOCADQ5VW36 1801 aa18.42■□□□□ 0.54
DDR1-249ENST00000503495 CDK5RAP2Q96SN8 1893 aa18.41■□□□□ 0.54
DDR1-249ENST00000503495 TRIOBPQ9H2D6 2365 aa18.41■□□□□ 0.54
DDR1-249ENST00000503495 MAST2Q6P0Q8 1798 aa18.41■□□□□ 0.54
DDR1-249ENST00000503495 EVI5O60447 810 aa18.41■□□□□ 0.54
DDR1-249ENST00000503495 SURF6O75683 361 aaKnown RBP18.41■□□□□ 0.54
DDR1-249ENST00000503495 HMGCRP04035 888 aa18.41■□□□□ 0.54
DDR1-249ENST00000503495 JAG1P78504 1218 aa18.41■□□□□ 0.54
DDR1-249ENST00000503495 MTMR2Q13614 643 aa18.41■□□□□ 0.54
DDR1-249ENST00000503495 MAPKAPK5Q8IW41 473 aa18.41■□□□□ 0.54
DDR1-249ENST00000503495 ANKLE1Q8NAG6 615 aa18.41■□□□□ 0.54
DDR1-249ENST00000503495 TMOD4Q9NZQ9 345 aa18.41■□□□□ 0.54
DDR1-249ENST00000503495 FLT1P17948 1338 aa18.41■□□□□ 0.54
DDR1-249ENST00000503495 RPTORQ8N122 1335 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms