RNA–Protein interactions for RNA: ENST00000503414.5

SPARCL1-205, Transcript of SPARC like 1, humanhuman

TSL 2 BASIC

Gene SPARCL1, Length 2,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-205ENST00000503414 TBC1D9Q6ZT07 1266 aa8.5□□□□□ -1.05
SPARCL1-205ENST00000503414 APBB1IPQ7Z5R6 666 aaPredicted RBP8.5□□□□□ -1.05
SPARCL1-205ENST00000503414 CEP57Q86XR8 500 aa8.5□□□□□ -1.05
SPARCL1-205ENST00000503414 ZGPATQ8N5A5 531 aaKnown RBP8.5□□□□□ -1.05
SPARCL1-205ENST00000503414 C8orf58Q8NAV2 365 aa8.5□□□□□ -1.05
SPARCL1-205ENST00000503414 LZICQ8WZA0 190 aa8.5□□□□□ -1.05
SPARCL1-205ENST00000503414 GOLGA1Q92805 767 aa8.5□□□□□ -1.05
SPARCL1-205ENST00000503414 CCDC102AQ96A19 550 aa8.5□□□□□ -1.05
SPARCL1-205ENST00000503414 BARX2Q9UMQ3 279 aaPredicted RBP8.5□□□□□ -1.05
SPARCL1-205ENST00000503414 MEGF6O75095 1541 aa8.5□□□□□ -1.05
SPARCL1-205ENST00000503414 RAD21O60216 631 aa8.5□□□□□ -1.05
SPARCL1-205ENST00000503414 GADD45BO75293 160 aaPredicted RBP8.5□□□□□ -1.05
SPARCL1-205ENST00000503414 ATP6V1G1O75348 118 aa8.5□□□□□ -1.05
SPARCL1-205ENST00000503414 COL5A2P05997 1499 aaPredicted RBP8.5□□□□□ -1.05
SPARCL1-205ENST00000503414 TXLNAP40222 546 aa8.5□□□□□ -1.05
SPARCL1-205ENST00000503414 USP5P45974 858 aa8.5□□□□□ -1.05
SPARCL1-205ENST00000503414 COL16A1Q07092 1604 aaPredicted RBP8.5□□□□□ -1.05
SPARCL1-205ENST00000503414 MPP3Q13368 585 aa8.5□□□□□ -1.05
SPARCL1-205ENST00000503414 KIAA0753Q2KHM9 967 aa8.5□□□□□ -1.05
SPARCL1-205ENST00000503414 GJC2Q5T442 439 aaPredicted RBP8.5□□□□□ -1.05
SPARCL1-205ENST00000503414 AHDC1Q5TGY3 1603 aaPredicted RBP8.5□□□□□ -1.05
SPARCL1-205ENST00000503414 WDR17Q8IZU2 1322 aa8.5□□□□□ -1.05
SPARCL1-205ENST00000503414 CUL5Q93034 780 aa8.5□□□□□ -1.05
SPARCL1-205ENST00000503414 FAM163AQ96GL9 167 aaPredicted RBP8.5□□□□□ -1.05
SPARCL1-205ENST00000503414 NAT10Q9H0A0 1025 aaKnown RBP8.5□□□□□ -1.05
SPARCL1-205ENST00000503414 TMEM165Q9HC07 324 aa8.5□□□□□ -1.05
SPARCL1-205ENST00000503414 DNAAF2Q9NVR5 837 aaKnown RBP8.5□□□□□ -1.05
SPARCL1-205ENST00000503414 NRBP1Q9UHY1 535 aa8.5□□□□□ -1.05
SPARCL1-205ENST00000503414 FRMD3A2A2Y4 597 aa8.49□□□□□ -1.05
SPARCL1-205ENST00000503414 GNAT3A8MTJ3 354 aa8.49□□□□□ -1.05
SPARCL1-205ENST00000503414 ZSCAN12O43309 604 aa8.49□□□□□ -1.05
SPARCL1-205ENST00000503414 KRT38O76015 456 aa8.49□□□□□ -1.05
SPARCL1-205ENST00000503414 DESP17661 470 aa8.49□□□□□ -1.05
SPARCL1-205ENST00000503414 CYP11B2P19099 503 aa8.49□□□□□ -1.05
SPARCL1-205ENST00000503414 PSMD7P51665 324 aa8.49□□□□□ -1.05
SPARCL1-205ENST00000503414 USP4Q13107 963 aa8.49□□□□□ -1.05
SPARCL1-205ENST00000503414 THEMIS2Q5TEJ8 643 aa8.49□□□□□ -1.05
SPARCL1-205ENST00000503414 SYNE3Q6ZMZ3 975 aa8.49□□□□□ -1.05
SPARCL1-205ENST00000503414 NOL8Q76FK4 1167 aaKnown RBP8.49□□□□□ -1.05
SPARCL1-205ENST00000503414 GALNT15Q8N3T1 639 aa8.49□□□□□ -1.05
SPARCL1-205ENST00000503414 RAPGEF4Q8WZA2 1011 aa8.49□□□□□ -1.05
SPARCL1-205ENST00000503414 C8orf37Q96NL8 207 aa8.49□□□□□ -1.05
SPARCL1-205ENST00000503414 TSC22D3Q99576 134 aa8.49□□□□□ -1.05
SPARCL1-205ENST00000503414 PARD6BQ9BYG5 372 aa8.49□□□□□ -1.05
SPARCL1-205ENST00000503414 FAM204AQ9H8W3 233 aa8.49□□□□□ -1.05
SPARCL1-205ENST00000503414 PHLPP1O60346 1717 aa8.49□□□□□ -1.05
SPARCL1-205ENST00000503414 CYP27B1O15528 508 aa8.49□□□□□ -1.05
SPARCL1-205ENST00000503414 KCNQ3O43525 872 aa8.49□□□□□ -1.05
SPARCL1-205ENST00000503414 ZEB2O60315 1214 aa8.49□□□□□ -1.05
SPARCL1-205ENST00000503414 SKAP2O75563 359 aaPredicted RBP8.49□□□□□ -1.05
SPARCL1-205ENST00000503414 RASSF9O75901 435 aa8.49□□□□□ -1.05
SPARCL1-205ENST00000503414 RNF8O76064 485 aa8.49□□□□□ -1.05
SPARCL1-205ENST00000503414 VIL1P09327 827 aaKnown RBP8.49□□□□□ -1.05
SPARCL1-205ENST00000503414 EIF4BP23588 611 aaKnown RBP8.49□□□□□ -1.05
SPARCL1-205ENST00000503414 CCT5P48643 541 aa8.49□□□□□ -1.05
SPARCL1-205ENST00000503414 PABPC4Q13310 644 aaKnown RBP eCLIP8.49□□□□□ -1.05
SPARCL1-205ENST00000503414 Q4G0T1 1027 aa8.49□□□□□ -1.05
SPARCL1-205ENST00000503414 CCDC40Q4G0X9 1142 aa8.49□□□□□ -1.05
SPARCL1-205ENST00000503414 VPS53Q5VIR6 699 aa8.49□□□□□ -1.05
SPARCL1-205ENST00000503414 PARP9Q8IXQ6 854 aa8.49□□□□□ -1.05
SPARCL1-205ENST00000503414 SPAG5Q96R06 1193 aa8.49□□□□□ -1.05
SPARCL1-205ENST00000503414 TSPYL2Q9H2G4 693 aaPredicted RBP8.49□□□□□ -1.05
SPARCL1-205ENST00000503414 VIPAS39Q9H9C1 493 aa8.49□□□□□ -1.05
SPARCL1-205ENST00000503414 IMPACTQ9P2X3 320 aa8.49□□□□□ -1.05
SPARCL1-205ENST00000503414 CCDC69A6NI79 296 aa8.48□□□□□ -1.05
SPARCL1-205ENST00000503414 HMGB1P1B2RPK0 211 aaPredicted RBP8.48□□□□□ -1.05
SPARCL1-205ENST00000503414 MEFVO15553 781 aaPredicted RBP8.48□□□□□ -1.05
SPARCL1-205ENST00000503414 SMNDC1O75940 238 aaKnown RBP eCLIP8.48□□□□□ -1.05
SPARCL1-205ENST00000503414 LUC7L3O95232 432 aaKnown RBP8.48□□□□□ -1.05
SPARCL1-205ENST00000503414 SLC4A2P04920 1241 aa8.48□□□□□ -1.05
SPARCL1-205ENST00000503414 RPL13P26373 211 aaKnown RBP8.48□□□□□ -1.05
SPARCL1-205ENST00000503414 CCZ1BP86790 482 aa8.48□□□□□ -1.05
SPARCL1-205ENST00000503414 CCZ1P86791 482 aaPredicted RBP8.48□□□□□ -1.05
SPARCL1-205ENST00000503414 GNL2Q13823 731 aaKnown RBP8.48□□□□□ -1.05
SPARCL1-205ENST00000503414 MAP3K11Q16584 847 aa8.48□□□□□ -1.05
SPARCL1-205ENST00000503414 RSRC2Q7L4I2 434 aaKnown RBP8.48□□□□□ -1.05
SPARCL1-205ENST00000503414 FAM76AQ8TAV0 307 aa8.48□□□□□ -1.05
SPARCL1-205ENST00000503414 DDX54Q8TDD1 881 aaKnown RBP8.48□□□□□ -1.05
SPARCL1-205ENST00000503414 PPP1R13BQ96KQ4 1090 aa8.48□□□□□ -1.05
SPARCL1-205ENST00000503414 DHRS1Q96LJ7 313 aa8.48□□□□□ -1.05
SPARCL1-205ENST00000503414 MPHOSPH8Q99549 860 aa8.48□□□□□ -1.05
SPARCL1-205ENST00000503414 PHACTR1Q9C0D0 580 aa8.48□□□□□ -1.05
SPARCL1-205ENST00000503414 NACA2Q9H009 215 aa8.48□□□□□ -1.05
SPARCL1-205ENST00000503414 TRMT1Q9NXH9 659 aaKnown RBP8.48□□□□□ -1.05
SPARCL1-205ENST00000503414 ANKIB1Q9P2G1 1089 aa8.48□□□□□ -1.05
SPARCL1-205ENST00000503414 DLG5Q8TDM6 1919 aa8.48□□□□□ -1.05
SPARCL1-205ENST00000503414 ZNF189O75820 626 aaPredicted RBP8.48□□□□□ -1.05
SPARCL1-205ENST00000503414 ZFXP17010 805 aaPredicted RBP8.48□□□□□ -1.05
SPARCL1-205ENST00000503414 XBP1P17861 261 aa8.48□□□□□ -1.05
SPARCL1-205ENST00000503414 SYT1P21579 422 aa8.48□□□□□ -1.05
SPARCL1-205ENST00000503414 RARSP54136 660 aaKnown RBP8.48□□□□□ -1.05
SPARCL1-205ENST00000503414 DPY19L2Q6NUT2 758 aa8.48□□□□□ -1.05
SPARCL1-205ENST00000503414 GIMAP6Q6P9H5 292 aa8.48□□□□□ -1.05
SPARCL1-205ENST00000503414 HOMER1Q86YM7 354 aa8.48□□□□□ -1.05
SPARCL1-205ENST00000503414 VCPKMTQ9H867 229 aa8.48□□□□□ -1.05
SPARCL1-205ENST00000503414 ACTR5Q9H9F9 607 aaPredicted RBP8.48□□□□□ -1.05
SPARCL1-205ENST00000503414 SLC39A2Q9NP94 309 aa8.48□□□□□ -1.05
SPARCL1-205ENST00000503414 HOOK1Q9UJC3 728 aaKnown RBP8.48□□□□□ -1.05
SPARCL1-205ENST00000503414 GMEB1Q9Y692 573 aa8.48□□□□□ -1.05
SPARCL1-205ENST00000503414 CRB1P82279 1406 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 270.2 ms