RNA–Protein interactions for RNA: ENST00000502955.5

DDR1-247, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-247ENST00000502955 DEFB118Q96PH6 123 aa17■□□□□ 0.31
DDR1-247ENST00000502955 FRMD4AQ9P2Q2 1039 aaPredicted RBP17■□□□□ 0.31
DDR1-247ENST00000502955 ATAD5Q96QE3 1844 aa16.99■□□□□ 0.31
DDR1-247ENST00000502955 GCLCP48506 637 aaPredicted RBP16.99■□□□□ 0.31
DDR1-247ENST00000502955 CDCA7LQ96GN5 454 aa16.99■□□□□ 0.31
DDR1-247ENST00000502955 MEIS3Q99687 375 aa16.99■□□□□ 0.31
DDR1-247ENST00000502955 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.99■□□□□ 0.31
DDR1-247ENST00000502955 ALPK3Q96L96 1907 aa16.98■□□□□ 0.31
DDR1-247ENST00000502955 TFCP2Q12800 502 aa16.98■□□□□ 0.31
DDR1-247ENST00000502955 ANKLE1Q8NAG6 615 aa16.98■□□□□ 0.31
DDR1-247ENST00000502955 ZNF280CQ8ND82 737 aa16.98■□□□□ 0.31
DDR1-247ENST00000502955 NSUN4Q96CB9 384 aaKnown RBP16.98■□□□□ 0.31
DDR1-247ENST00000502955 LDHCP07864 332 aa16.97■□□□□ 0.31
DDR1-247ENST00000502955 GSTO1P78417 241 aa16.97■□□□□ 0.31
DDR1-247ENST00000502955 PABPC4Q13310 644 aaKnown RBP eCLIP16.97■□□□□ 0.31
DDR1-247ENST00000502955 SH3D19Q5HYK7 790 aa16.97■□□□□ 0.31
DDR1-247ENST00000502955 CCDC84Q86UT8 332 aaPredicted RBP16.97■□□□□ 0.31
DDR1-247ENST00000502955 HMG20BQ9P0W2 317 aa16.97■□□□□ 0.31
DDR1-247ENST00000502955 SRGAP3O43295 1099 aa16.96■□□□□ 0.31
DDR1-247ENST00000502955 HMGCRP04035 888 aa16.96■□□□□ 0.31
DDR1-247ENST00000502955 GNAI3P08754 354 aa16.96■□□□□ 0.31
DDR1-247ENST00000502955 ARID4AP29374 1257 aaPredicted RBP16.96■□□□□ 0.31
DDR1-247ENST00000502955 CAP2P40123 477 aa16.96■□□□□ 0.31
DDR1-247ENST00000502955 SPP2Q13103 211 aa16.96■□□□□ 0.31
DDR1-247ENST00000502955 NECAB2Q7Z6G3 386 aa16.96■□□□□ 0.31
DDR1-247ENST00000502955 SPATA5Q8NB90 893 aa16.96■□□□□ 0.31
DDR1-247ENST00000502955 ARHGAP45Q92619 1136 aa16.96■□□□□ 0.31
DDR1-247ENST00000502955 PAWRQ96IZ0 340 aaKnown RBP16.96■□□□□ 0.31
DDR1-247ENST00000502955 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.96■□□□□ 0.319e-6■■■■■ 32.4
DDR1-247ENST00000502955 HERC5Q9UII4 1024 aaKnown RBP16.96■□□□□ 0.31
DDR1-247ENST00000502955 GJD2Q9UKL4 321 aa16.96■□□□□ 0.31
DDR1-247ENST00000502955 FAM196BA6NMK8 535 aa16.95■□□□□ 0.3
DDR1-247ENST00000502955 USP17L5A8MUK1 530 aa16.95■□□□□ 0.3
DDR1-247ENST00000502955 HMGCS2P54868 508 aa16.95■□□□□ 0.3
DDR1-247ENST00000502955 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.95■□□□□ 0.3
DDR1-247ENST00000502955 RPTORQ8N122 1335 aa16.95■□□□□ 0.3
DDR1-247ENST00000502955 A0A0C4DFX4 3053 aa16.94■□□□□ 0.3
DDR1-247ENST00000502955 PLXNB2O15031 1838 aa16.94■□□□□ 0.3
DDR1-247ENST00000502955 BMP8BP34820 402 aa16.94■□□□□ 0.3
DDR1-247ENST00000502955 PI16Q6UXB8 463 aa16.94■□□□□ 0.3
DDR1-247ENST00000502955 ASCC2Q9H1I8 757 aaPredicted RBP16.94■□□□□ 0.3
DDR1-247ENST00000502955 AS3MTQ9HBK9 375 aa16.94■□□□□ 0.3
DDR1-247ENST00000502955 MORF4L1Q9UBU8 362 aa16.94■□□□□ 0.3
DDR1-247ENST00000502955 TAOK2Q9UL54 1235 aa16.94■□□□□ 0.3
DDR1-247ENST00000502955 SIPA1L1O43166 1804 aa16.93■□□□□ 0.3
DDR1-247ENST00000502955 RRP1BQ14684 758 aaKnown RBP16.93■□□□□ 0.3
DDR1-247ENST00000502955 DIS3LQ8TF46 1054 aaKnown RBP16.93■□□□□ 0.3
DDR1-247ENST00000502955 NEUROD6Q96NK8 337 aa16.93■□□□□ 0.3
DDR1-247ENST00000502955 WDR18Q9BV38 432 aa16.93■□□□□ 0.3
DDR1-247ENST00000502955 DHX36Q9H2U1 1008 aaKnown RBP16.93■□□□□ 0.3
DDR1-247ENST00000502955 HMX1Q9NP08 348 aaPredicted RBP16.93■□□□□ 0.3
DDR1-247ENST00000502955 PI4KBQ9UBF8 816 aa16.93■□□□□ 0.3
DDR1-247ENST00000502955 STAP2Q9UGK3 403 aa16.93■□□□□ 0.3
DDR1-247ENST00000502955 SOX1O00570 391 aaPredicted RBP16.92■□□□□ 0.3
DDR1-247ENST00000502955 HOXA7P31268 230 aaPredicted RBP16.92■□□□□ 0.3
DDR1-247ENST00000502955 MCAMP43121 646 aa16.92■□□□□ 0.3
DDR1-247ENST00000502955 RARSP54136 660 aaKnown RBP16.92■□□□□ 0.3
DDR1-247ENST00000502955 GPR153Q6NV75 609 aa16.92■□□□□ 0.3
DDR1-247ENST00000502955 TBC1D9Q6ZT07 1266 aa16.92■□□□□ 0.3
DDR1-247ENST00000502955 METTL16Q86W50 562 aaKnown RBP16.92■□□□□ 0.3
DDR1-247ENST00000502955 GDF15Q99988 308 aa16.92■□□□□ 0.3
DDR1-247ENST00000502955 NBPF3Q9H094 633 aa16.92■□□□□ 0.3
DDR1-247ENST00000502955 RAI14Q9P0K7 980 aa16.92■□□□□ 0.3
DDR1-247ENST00000502955 FOCADQ5VW36 1801 aa16.91■□□□□ 0.3
DDR1-247ENST00000502955 MNX1P50219 401 aaPredicted RBP16.91■□□□□ 0.3
DDR1-247ENST00000502955 BACE1P56817 501 aa16.91■□□□□ 0.3
DDR1-247ENST00000502955 GORABQ5T7V8 394 aa16.91■□□□□ 0.3
DDR1-247ENST00000502955 MAP3K21Q5TCX8 1036 aa16.91■□□□□ 0.3
DDR1-247ENST00000502955 TEX11Q8IYF3 940 aa16.91■□□□□ 0.3
DDR1-247ENST00000502955 GINM1Q9NU53 330 aa16.91■□□□□ 0.3
DDR1-247ENST00000502955 MAST2Q6P0Q8 1798 aa16.91■□□□□ 0.3
DDR1-247ENST00000502955 DDX60LQ5H9U9 1706 aaKnown RBP16.9■□□□□ 0.3
DDR1-247ENST00000502955 IGSF3O75054 1194 aa16.9■□□□□ 0.3
DDR1-247ENST00000502955 ASNSP08243 561 aa16.9■□□□□ 0.3
DDR1-247ENST00000502955 UQCRFS1P1P0C7P4 283 aa16.9■□□□□ 0.3
DDR1-247ENST00000502955 XRCC5P13010 732 aaKnown RBP16.9■□□□□ 0.3
DDR1-247ENST00000502955 SH3RF3Q8TEJ3 882 aaPredicted RBP16.9■□□□□ 0.3
DDR1-247ENST00000502955 TRIB2Q92519 343 aa16.9■□□□□ 0.3
DDR1-247ENST00000502955 LRCH3Q96II8 777 aa16.9■□□□□ 0.3
DDR1-247ENST00000502955 OGDHLQ9ULD0 1010 aa16.9■□□□□ 0.3
DDR1-247ENST00000502955 CDK5RAP2Q96SN8 1893 aa16.9■□□□□ 0.3
DDR1-247ENST00000502955 C19orf81C9J6K1 198 aa16.89■□□□□ 0.29
DDR1-247ENST00000502955 PLCG2P16885 1265 aa16.89■□□□□ 0.29
DDR1-247ENST00000502955 PPP4CP60510 307 aa16.89■□□□□ 0.29
DDR1-247ENST00000502955 TRIM32Q13049 653 aa16.89■□□□□ 0.29
DDR1-247ENST00000502955 MTMR2Q13614 643 aa16.89■□□□□ 0.29
DDR1-247ENST00000502955 SOCS4Q8WXH5 440 aa16.89■□□□□ 0.29
DDR1-247ENST00000502955 NOL10Q9BSC4 688 aaKnown RBP16.89■□□□□ 0.29
DDR1-247ENST00000502955 LRP2BPQ9P2M1 347 aa16.89■□□□□ 0.29
DDR1-247ENST00000502955 BAG3O95817 575 aa16.88■□□□□ 0.29
DDR1-247ENST00000502955 GNAI2P04899 355 aa16.88■□□□□ 0.29
DDR1-247ENST00000502955 IRX3P78415 501 aaPredicted RBP16.88■□□□□ 0.29
DDR1-247ENST00000502955 FOXP4Q8IVH2 680 aaPredicted RBP16.88■□□□□ 0.29
DDR1-247ENST00000502955 TRMT44Q8IYL2 757 aaKnown RBP16.88■□□□□ 0.29
DDR1-247ENST00000502955 C7orf61Q8IZ16 206 aa16.88■□□□□ 0.29
DDR1-247ENST00000502955 SLC17A8Q8NDX2 589 aa16.88■□□□□ 0.29
DDR1-247ENST00000502955 C11orf49Q9H6J7 331 aa16.88■□□□□ 0.29
DDR1-247ENST00000502955 DNAJC18Q9H819 358 aa16.88■□□□□ 0.29
DDR1-247ENST00000502955 GPR108Q9NPR9 543 aa16.88■□□□□ 0.29
DDR1-247ENST00000502955 TMOD4Q9NZQ9 345 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms