RNA–Protein interactions for RNA: ENST00000502555.5

SGCA-203, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 1,349 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-203ENST00000502555 NFIAQ12857 509 aa15.89■□□□□ 0.13
SGCA-203ENST00000502555 ME3Q16798 604 aa15.89■□□□□ 0.13
SGCA-203ENST00000502555 FKBP1CQ5VVH2 108 aa15.89■□□□□ 0.13
SGCA-203ENST00000502555 C16orf86Q6ZW13 317 aa15.89■□□□□ 0.13
SGCA-203ENST00000502555 CHMP4CQ96CF2 233 aa15.89■□□□□ 0.13
SGCA-203ENST00000502555 ZNF274Q96GC6 653 aaPredicted RBP15.89■□□□□ 0.13
SGCA-203ENST00000502555 ZBED3Q96IU2 234 aaPredicted RBP15.89■□□□□ 0.13
SGCA-203ENST00000502555 PRMT6Q96LA8 375 aaPredicted RBP15.89■□□□□ 0.13
SGCA-203ENST00000502555 UBAC1Q9BSL1 405 aa15.89■□□□□ 0.13
SGCA-203ENST00000502555 CWC22Q9HCG8 908 aaKnown RBP15.89■□□□□ 0.13
SGCA-203ENST00000502555 CIZ1Q9ULV3 898 aaPredicted RBP15.89■□□□□ 0.13
SGCA-203ENST00000502555 CDK5RAP2Q96SN8 1893 aa15.88■□□□□ 0.13
SGCA-203ENST00000502555 MYO1BO43795 1136 aa15.88■□□□□ 0.13
SGCA-203ENST00000502555 LARGE1O95461 756 aa15.88■□□□□ 0.13
SGCA-203ENST00000502555 HLA-DOAP06340 250 aa15.88■□□□□ 0.13
SGCA-203ENST00000502555 DDIT3P35638 169 aa15.88■□□□□ 0.13
SGCA-203ENST00000502555 LIFRP42702 1097 aa15.88■□□□□ 0.13
SGCA-203ENST00000502555 SPDYE2Q495Y8 402 aa15.88■□□□□ 0.13
SGCA-203ENST00000502555 TMEM67Q5HYA8 995 aa15.88■□□□□ 0.13
SGCA-203ENST00000502555 SGMS1Q86VZ5 419 aa15.88■□□□□ 0.13
SGCA-203ENST00000502555 IQCA1Q86XH1 822 aa15.88■□□□□ 0.13
SGCA-203ENST00000502555 STK11IPQ8N1F8 1099 aa15.88■□□□□ 0.13
SGCA-203ENST00000502555 SPRYD3Q8NCJ5 442 aa15.88■□□□□ 0.13
SGCA-203ENST00000502555 IGDCC4Q8TDY8 1250 aa15.88■□□□□ 0.13
SGCA-203ENST00000502555 LARP6Q9BRS8 491 aaKnown RBP15.88■□□□□ 0.13
SGCA-203ENST00000502555 EHD4Q9H223 541 aa15.88■□□□□ 0.13
SGCA-203ENST00000502555 SLKQ9H2G2 1235 aaPredicted RBP15.88■□□□□ 0.13
SGCA-203ENST00000502555 TDRD3Q9H7E2 651 aaKnown RBP15.88■□□□□ 0.13
SGCA-203ENST00000502555 MYOZ2Q9NPC6 264 aa15.88■□□□□ 0.13
SGCA-203ENST00000502555 FAM198AQ9UFP1 575 aa15.88■□□□□ 0.13
SGCA-203ENST00000502555 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.88■□□□□ 0.13
SGCA-203ENST00000502555 ATRNL1Q5VV63 1379 aa15.87■□□□□ 0.13
SGCA-203ENST00000502555 ERICH2A1L162 156 aa15.87■□□□□ 0.13
SGCA-203ENST00000502555 IFIT3O14879 490 aaKnown RBP15.87■□□□□ 0.13
SGCA-203ENST00000502555 RANBP6O60518 1105 aaKnown RBP15.87■□□□□ 0.13
SGCA-203ENST00000502555 PFKFB2O60825 505 aa15.87■□□□□ 0.13
SGCA-203ENST00000502555 EVX2Q03828 476 aa15.87■□□□□ 0.13
SGCA-203ENST00000502555 GABPAQ06546 454 aa15.87■□□□□ 0.13
SGCA-203ENST00000502555 APOBRQ0VD83 1088 aa15.87■□□□□ 0.13
SGCA-203ENST00000502555 GPC2Q8N158 579 aa15.87■□□□□ 0.13
SGCA-203ENST00000502555 TMTC2Q8N394 836 aa15.87■□□□□ 0.13
SGCA-203ENST00000502555 NKX2-3Q8TAU0 364 aa15.87■□□□□ 0.13
SGCA-203ENST00000502555 LY9Q9HBG7 655 aa15.87■□□□□ 0.13
SGCA-203ENST00000502555 MKNK2Q9HBH9 465 aa15.87■□□□□ 0.13
SGCA-203ENST00000502555 RNF181Q9P0P0 153 aa15.87■□□□□ 0.13
SGCA-203ENST00000502555 ZNF70Q9UC06 446 aaPredicted RBP15.87■□□□□ 0.13
SGCA-203ENST00000502555 SWAP70Q9UH65 585 aa15.87■□□□□ 0.13
SGCA-203ENST00000502555 GJA3Q9Y6H8 435 aa15.87■□□□□ 0.13
SGCA-203ENST00000502555 PRDM1O75626 825 aa15.86■□□□□ 0.13
SGCA-203ENST00000502555 CDK8P49336 464 aa15.86■□□□□ 0.13
SGCA-203ENST00000502555 SLC4A8Q2Y0W8 1093 aa15.86■□□□□ 0.13
SGCA-203ENST00000502555 CCDC178Q5BJE1 867 aa15.86■□□□□ 0.13
SGCA-203ENST00000502555 CCDC83Q8IWF9 413 aa15.86■□□□□ 0.13
SGCA-203ENST00000502555 MICALL2Q8IY33 904 aa15.86■□□□□ 0.13
SGCA-203ENST00000502555 GTF3C6Q969F1 213 aa15.86■□□□□ 0.13
SGCA-203ENST00000502555 DYNLL2Q96FJ2 89 aa15.86■□□□□ 0.13
SGCA-203ENST00000502555 ZSCAN10Q96SZ4 725 aaPredicted RBP15.86■□□□□ 0.13
SGCA-203ENST00000502555 GPHNQ9NQX3 736 aaPredicted RBP15.86■□□□□ 0.13
SGCA-203ENST00000502555 FOXD4L1Q9NU39 408 aa15.86■□□□□ 0.13
SGCA-203ENST00000502555 SERPINB13Q9UIV8 391 aa15.86■□□□□ 0.13
SGCA-203ENST00000502555 ECM29Q5VYK3 1845 aa15.85■□□□□ 0.13
SGCA-203ENST00000502555 KLF18A0A0U1RQI7 1052 aa15.85■□□□□ 0.13
SGCA-203ENST00000502555 TSPY2A6NKD2 308 aa15.85■□□□□ 0.13
SGCA-203ENST00000502555 GRIN3BO60391 1043 aa15.85■□□□□ 0.13
SGCA-203ENST00000502555 PDIA3P30101 505 aaKnown RBP15.85■□□□□ 0.13
SGCA-203ENST00000502555 RCAN1P53805 252 aa15.85■□□□□ 0.13
SGCA-203ENST00000502555 CACNB3P54284 484 aa15.85■□□□□ 0.13
SGCA-203ENST00000502555 ST3GAL1Q11201 340 aa15.85■□□□□ 0.13
SGCA-203ENST00000502555 WTAPQ15007 396 aa15.85■□□□□ 0.13
SGCA-203ENST00000502555 ZNF444Q8N0Y2 327 aaPredicted RBP15.85■□□□□ 0.13
SGCA-203ENST00000502555 CHMP5Q9NZZ3 219 aa15.85■□□□□ 0.13
SGCA-203ENST00000502555 PI4KBQ9UBF8 816 aa15.85■□□□□ 0.13
SGCA-203ENST00000502555 CNOT7Q9UIV1 285 aaKnown RBP15.85■□□□□ 0.13
SGCA-203ENST00000502555 DICER1Q9UPY3 1922 aaKnown RBP15.84■□□□□ 0.13
SGCA-203ENST00000502555 TNKSO95271 1327 aa15.84■□□□□ 0.13
SGCA-203ENST00000502555 ZC3H4Q9UPT8 1303 aaKnown RBP15.84■□□□□ 0.13
SGCA-203ENST00000502555 GOLGA8BA8MQT2 603 aa15.84■□□□□ 0.13
SGCA-203ENST00000502555 WNT10BO00744 389 aa15.84■□□□□ 0.13
SGCA-203ENST00000502555 RASA1P20936 1047 aa15.84■□□□□ 0.13
SGCA-203ENST00000502555 TCP10Q12799 353 aa15.84■□□□□ 0.13
SGCA-203ENST00000502555 SEC23AQ15436 765 aa15.84■□□□□ 0.13
SGCA-203ENST00000502555 GPR162Q16538 588 aa15.84■□□□□ 0.13
SGCA-203ENST00000502555 FAM83AQ86UY5 434 aa15.84■□□□□ 0.13
SGCA-203ENST00000502555 NECAB1Q8N987 351 aa15.84■□□□□ 0.13
SGCA-203ENST00000502555 SLC44A5Q8NCS7 719 aa15.84■□□□□ 0.13
SGCA-203ENST00000502555 FAM151AQ8WW52 585 aa15.84■□□□□ 0.13
SGCA-203ENST00000502555 LLPHQ9BRT6 129 aaKnown RBP15.84■□□□□ 0.13
SGCA-203ENST00000502555 TCP11L1Q9NUJ3 509 aa15.84■□□□□ 0.13
SGCA-203ENST00000502555 BRPF3Q9ULD4 1205 aa15.84■□□□□ 0.13
SGCA-203ENST00000502555 MYH1P12882 1939 aa15.83■□□□□ 0.12
SGCA-203ENST00000502555 CLRN2A0PK11 232 aa15.83■□□□□ 0.12
SGCA-203ENST00000502555 CCDC69A6NI79 296 aa15.83■□□□□ 0.12
SGCA-203ENST00000502555 H7C1D1 291 aa15.83■□□□□ 0.12
SGCA-203ENST00000502555 DHX16O60231 1041 aaKnown RBP15.83■□□□□ 0.12
SGCA-203ENST00000502555 TFAP4Q01664 338 aa15.83■□□□□ 0.12
SGCA-203ENST00000502555 C9orf131Q5VYM1 1079 aa15.83■□□□□ 0.12
SGCA-203ENST00000502555 APOA5Q6Q788 366 aa15.83■□□□□ 0.12
SGCA-203ENST00000502555 SYNE3Q6ZMZ3 975 aa15.83■□□□□ 0.12
SGCA-203ENST00000502555 NFXL1Q6ZNB6 911 aa15.83■□□□□ 0.12
SGCA-203ENST00000502555 ZFPM1Q8IX07 1006 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms