RNA–Protein interactions for RNA: ENST00000501817.6

AP001258.1-201, humanhuman

TSL 5 BASIC

Gene AP001258.1, Length 2,110 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001258.1-201ENST00000501817 RASSF7Q02833 373 aa16.07■□□□□ 0.16
AP001258.1-201ENST00000501817 APOBEC3HQ6NTF7 200 aaKnown RBP16.07■□□□□ 0.16
AP001258.1-201ENST00000501817 INTS4Q96HW7 963 aaKnown RBP16.07■□□□□ 0.16
AP001258.1-201ENST00000501817 ZSCAN31Q96LW9 406 aaPredicted RBP16.07■□□□□ 0.16
AP001258.1-201ENST00000501817 FHDC1Q9C0D6 1143 aaPredicted RBP16.07■□□□□ 0.16
AP001258.1-201ENST00000501817 SH2B1Q9NRF2 756 aaPredicted RBP16.07■□□□□ 0.16
AP001258.1-201ENST00000501817 ZDHHC9Q9Y397 364 aa16.07■□□□□ 0.16
AP001258.1-201ENST00000501817 PRDM1O75626 825 aa16.07■□□□□ 0.16
AP001258.1-201ENST00000501817 SBK1Q52WX2 424 aa16.07■□□□□ 0.16
AP001258.1-201ENST00000501817 HHIPL2Q6UWX4 724 aa16.07■□□□□ 0.16
AP001258.1-201ENST00000501817 TEKT1Q969V4 418 aa16.07■□□□□ 0.16
AP001258.1-201ENST00000501817 SENP2Q9HC62 589 aa16.07■□□□□ 0.16
AP001258.1-201ENST00000501817 TOMM22Q9NS69 142 aa16.07■□□□□ 0.16
AP001258.1-201ENST00000501817 ARPP21Q9UBL0 812 aaPredicted RBP16.07■□□□□ 0.16
AP001258.1-201ENST00000501817 SAP30BPQ9UHR5 308 aaKnown RBP16.07■□□□□ 0.16
AP001258.1-201ENST00000501817 FLT1P17948 1338 aa16.07■□□□□ 0.16
AP001258.1-201ENST00000501817 NIM1KQ8IY84 436 aa16.06■□□□□ 0.16
AP001258.1-201ENST00000501817 FBXL16Q8N461 479 aa16.06■□□□□ 0.16
AP001258.1-201ENST00000501817 VPS33BQ9H267 617 aa16.06■□□□□ 0.16
AP001258.1-201ENST00000501817 LMBRD1Q9NUN5 540 aa16.06■□□□□ 0.16
AP001258.1-201ENST00000501817 WDR19Q8NEZ3 1342 aa16.06■□□□□ 0.16
AP001258.1-201ENST00000501817 PLCG2P16885 1265 aa16.06■□□□□ 0.16
AP001258.1-201ENST00000501817 C12orf60Q5U649 245 aa16.06■□□□□ 0.16
AP001258.1-201ENST00000501817 CERS3Q8IU89 383 aa16.06■□□□□ 0.16
AP001258.1-201ENST00000501817 CNNM2Q9H8M5 875 aa16.06■□□□□ 0.16
AP001258.1-201ENST00000501817 DDX4Q9NQI0 724 aaKnown RBP16.06■□□□□ 0.16
AP001258.1-201ENST00000501817 ZNRF3Q9ULT6 936 aa16.06■□□□□ 0.16
AP001258.1-201ENST00000501817 PITPNM1O00562 1244 aa16.05■□□□□ 0.16
AP001258.1-201ENST00000501817 WDHD1O75717 1129 aaPredicted RBP16.05■□□□□ 0.16
AP001258.1-201ENST00000501817 FGRP09769 529 aa16.05■□□□□ 0.16
AP001258.1-201ENST00000501817 PLCD1P51178 756 aa16.05■□□□□ 0.16
AP001258.1-201ENST00000501817 CDC42EP5Q6NZY7 148 aa16.05■□□□□ 0.16
AP001258.1-201ENST00000501817 DYNLL2Q96FJ2 89 aa16.05■□□□□ 0.16
AP001258.1-201ENST00000501817 ZDHHC15Q96MV8 337 aa16.05■□□□□ 0.16
AP001258.1-201ENST00000501817 ZKSCAN3Q9BRR0 538 aa16.05■□□□□ 0.16
AP001258.1-201ENST00000501817 KRT23Q9C075 422 aa16.05■□□□□ 0.16
AP001258.1-201ENST00000501817 SH2B2O14492 632 aaPredicted RBP16.04■□□□□ 0.16
AP001258.1-201ENST00000501817 VIL1P09327 827 aaKnown RBP16.04■□□□□ 0.16
AP001258.1-201ENST00000501817 SCRN1Q12765 414 aa16.04■□□□□ 0.16
AP001258.1-201ENST00000501817 PICALMQ13492 652 aa16.04■□□□□ 0.16
AP001258.1-201ENST00000501817 RSBN1LQ6PCB5 846 aaPredicted RBP16.04■□□□□ 0.16
AP001258.1-201ENST00000501817 IGDCC4Q8TDY8 1250 aa16.04■□□□□ 0.16
AP001258.1-201ENST00000501817 RNF41Q9H4P4 317 aaPredicted RBP16.04■□□□□ 0.16
AP001258.1-201ENST00000501817 USP40Q9NVE5 1235 aa16.04■□□□□ 0.16
AP001258.1-201ENST00000501817 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.04■□□□□ 0.16
AP001258.1-201ENST00000501817 CXCL9Q07325 125 aa16.04■□□□□ 0.16
AP001258.1-201ENST00000501817 RAB11FIP4Q86YS3 637 aa16.04■□□□□ 0.16
AP001258.1-201ENST00000501817 GTF3C6Q969F1 213 aa16.04■□□□□ 0.16
AP001258.1-201ENST00000501817 GMLQ99445 158 aa16.04■□□□□ 0.16
AP001258.1-201ENST00000501817 PDIA3P30101 505 aaKnown RBP16.03■□□□□ 0.16
AP001258.1-201ENST00000501817 RBM5P52756 815 aaKnown RBP eCLIP16.03■□□□□ 0.16
AP001258.1-201ENST00000501817 CACNB3P54284 484 aa16.03■□□□□ 0.16
AP001258.1-201ENST00000501817 EVCP57679 992 aa16.03■□□□□ 0.16
AP001258.1-201ENST00000501817 SLC44A5Q8NCS7 719 aa16.03■□□□□ 0.16
AP001258.1-201ENST00000501817 MRIQ9BWK5 157 aa16.03■□□□□ 0.16
AP001258.1-201ENST00000501817 LY9Q9HBG7 655 aa16.03■□□□□ 0.16
AP001258.1-201ENST00000501817 ANGEL1Q9UNK9 670 aaKnown RBP16.03■□□□□ 0.16
AP001258.1-201ENST00000501817 SBF1O95248 1867 aa16.03■□□□□ 0.16
AP001258.1-201ENST00000501817 SIPA1L1O43166 1804 aa16.03■□□□□ 0.16
AP001258.1-201ENST00000501817 ROBO3Q96MS0 1386 aa16.03■□□□□ 0.16
AP001258.1-201ENST00000501817 LTBP3Q9NS15 1303 aa16.03■□□□□ 0.16
AP001258.1-201ENST00000501817 MYH8P13535 1937 aa16.03■□□□□ 0.16
AP001258.1-201ENST00000501817 PFKFB2O60825 505 aa16.03■□□□□ 0.16
AP001258.1-201ENST00000501817 CCT2P78371 535 aaKnown RBP16.03■□□□□ 0.16
AP001258.1-201ENST00000501817 HDLBPQ00341 1268 aaKnown RBP16.03■□□□□ 0.16
AP001258.1-201ENST00000501817 NFIAQ12857 509 aa16.03■□□□□ 0.16
AP001258.1-201ENST00000501817 NCOA5Q9HCD5 579 aaKnown RBP16.03■□□□□ 0.16
AP001258.1-201ENST00000501817 SERPINA10Q9UK55 444 aa16.03■□□□□ 0.16
AP001258.1-201ENST00000501817 NAP1L2Q9ULW6 460 aaPredicted RBP16.03■□□□□ 0.16
AP001258.1-201ENST00000501817 KLF18A0A0U1RQI7 1052 aa16.02■□□□□ 0.16
AP001258.1-201ENST00000501817 CHAMP1Q96JM3 812 aa16.02■□□□□ 0.16
AP001258.1-201ENST00000501817 TMEM87BQ96K49 555 aa16.02■□□□□ 0.16
AP001258.1-201ENST00000501817 HPS5Q9UPZ3 1129 aa16.02■□□□□ 0.16
AP001258.1-201ENST00000501817 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.02■□□□□ 0.16
AP001258.1-201ENST00000501817 RANBP6O60518 1105 aaKnown RBP16.01■□□□□ 0.15
AP001258.1-201ENST00000501817 POLR3DP05423 398 aaPredicted RBP16.01■□□□□ 0.15
AP001258.1-201ENST00000501817 CFAP100Q494V2 611 aa16.01■□□□□ 0.15
AP001258.1-201ENST00000501817 TMEM67Q5HYA8 995 aa16.01■□□□□ 0.15
AP001258.1-201ENST00000501817 JDP2Q8WYK2 163 aa16.01■□□□□ 0.15
AP001258.1-201ENST00000501817 ESR2Q92731 530 aa16.01■□□□□ 0.15
AP001258.1-201ENST00000501817 ZNF274Q96GC6 653 aaPredicted RBP16.01■□□□□ 0.15
AP001258.1-201ENST00000501817 DICER1Q9UPY3 1922 aaKnown RBP16.01■□□□□ 0.15
AP001258.1-201ENST00000501817 IFIT3O14879 490 aaKnown RBP16.01■□□□□ 0.15
AP001258.1-201ENST00000501817 ORC4O43929 436 aa16.01■□□□□ 0.15
AP001258.1-201ENST00000501817 PRPF40AO75400 957 aaKnown RBP16.01■□□□□ 0.15
AP001258.1-201ENST00000501817 NCLP19338 710 aaKnown RBP16.01■□□□□ 0.15
AP001258.1-201ENST00000501817 GJB2P29033 226 aa16.01■□□□□ 0.15
AP001258.1-201ENST00000501817 FAM47AQ5JRC9 791 aa16.01■□□□□ 0.15
AP001258.1-201ENST00000501817 ZFPM1Q8IX07 1006 aa16.01■□□□□ 0.15
AP001258.1-201ENST00000501817 PRMT6Q96LA8 375 aaPredicted RBP16.01■□□□□ 0.15
AP001258.1-201ENST00000501817 SYT17Q9BSW7 474 aa16.01■□□□□ 0.15
AP001258.1-201ENST00000501817 SMC3Q9UQE7 1217 aa16.01■□□□□ 0.15
AP001258.1-201ENST00000501817 MYO3BQ8WXR4 1341 aa16■□□□□ 0.15
AP001258.1-201ENST00000501817 NMT2O60551 498 aa16■□□□□ 0.15
AP001258.1-201ENST00000501817 JAK2O60674 1132 aa16■□□□□ 0.15
AP001258.1-201ENST00000501817 CTDNEP1O95476 244 aa16■□□□□ 0.15
AP001258.1-201ENST00000501817 RXRAP19793 462 aa16■□□□□ 0.15
AP001258.1-201ENST00000501817 CAVIN1Q6NZI2 390 aaKnown RBP16■□□□□ 0.15
AP001258.1-201ENST00000501817 SHTN1A0MZ66 631 aa16■□□□□ 0.15
AP001258.1-201ENST00000501817 GOLGA8BA8MQT2 603 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms