RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 ILDR2Q71H61 639 aa4.69□□□□□ -1.66
CLTC-209ENST00000498711 ZNF654Q8IZM8 581 aa4.69□□□□□ -1.66
CLTC-209ENST00000498711 ANKLE1Q8NAG6 615 aa4.69□□□□□ -1.66
CLTC-209ENST00000498711 ANP32BQ92688 251 aaKnown RBP4.69□□□□□ -1.66
CLTC-209ENST00000498711 DNAJC25Q9H1X3 360 aa4.69□□□□□ -1.66
CLTC-209ENST00000498711 TSPY26PQ9H489 355 aa4.69□□□□□ -1.66
CLTC-209ENST00000498711 PGPEP1Q9NXJ5 209 aa4.69□□□□□ -1.66
CLTC-209ENST00000498711 DDX41Q9UJV9 622 aaKnown RBP4.69□□□□□ -1.66
CLTC-209ENST00000498711 PALD1Q9ULE6 856 aa4.69□□□□□ -1.66
CLTC-209ENST00000498711 TMA7Q9Y2S6 64 aaKnown RBP4.69□□□□□ -1.66
CLTC-209ENST00000498711 AK9Q5TCS8 1911 aa4.69□□□□□ -1.66
CLTC-209ENST00000498711 ADAMTS7Q9UKP4 1686 aa4.69□□□□□ -1.66
CLTC-209ENST00000498711 MAP3K5Q99683 1374 aa4.68□□□□□ -1.66
CLTC-209ENST00000498711 COL24A1Q17RW2 1714 aa4.68□□□□□ -1.66
CLTC-209ENST00000498711 ELL2O00472 640 aaPredicted RBP4.68□□□□□ -1.66
CLTC-209ENST00000498711 EIF1AYO14602 144 aaKnown RBP4.68□□□□□ -1.66
CLTC-209ENST00000498711 EIF4BP23588 611 aaKnown RBP4.68□□□□□ -1.66
CLTC-209ENST00000498711 MSNP26038 577 aaKnown RBP4.68□□□□□ -1.66
CLTC-209ENST00000498711 ADD1P35611 737 aaKnown RBP4.68□□□□□ -1.66
CLTC-209ENST00000498711 MTHFSDQ2M296 383 aaKnown RBP4.68□□□□□ -1.66
CLTC-209ENST00000498711 ZNF394Q53GI3 561 aa4.68□□□□□ -1.66
CLTC-209ENST00000498711 PLA2G2CQ5R387 149 aa4.68□□□□□ -1.66
CLTC-209ENST00000498711 SH3PXD2AQ5TCZ1 1133 aa4.68□□□□□ -1.66
CLTC-209ENST00000498711 SULT6B1Q6IMI4 303 aa4.68□□□□□ -1.66
CLTC-209ENST00000498711 ZNF662Q6ZS27 426 aa4.68□□□□□ -1.66
CLTC-209ENST00000498711 PI4K2BQ8TCG2 481 aa4.68□□□□□ -1.66
CLTC-209ENST00000498711 IFT43Q96FT9 208 aa4.68□□□□□ -1.66
CLTC-209ENST00000498711 LRRCC1Q9C099 1032 aa4.68□□□□□ -1.66
CLTC-209ENST00000498711 LSG1Q9H089 658 aaKnown RBP4.68□□□□□ -1.66
CLTC-209ENST00000498711 HRH3Q9Y5N1 445 aa4.68□□□□□ -1.66
CLTC-209ENST00000498711 BRWD3Q6RI45 1802 aa4.68□□□□□ -1.66
CLTC-209ENST00000498711 ANKRD62A6NC57 917 aa4.68□□□□□ -1.66
CLTC-209ENST00000498711 RNF223E7ERA6 249 aa4.68□□□□□ -1.66
CLTC-209ENST00000498711 MX1P20591 662 aa4.68□□□□□ -1.66
CLTC-209ENST00000498711 HMGN5P82970 282 aaKnown RBP4.68□□□□□ -1.66
CLTC-209ENST00000498711 ARID5AQ03989 594 aa4.68□□□□□ -1.66
CLTC-209ENST00000498711 MTX1Q13505 466 aa4.68□□□□□ -1.66
CLTC-209ENST00000498711 RC3H1Q5TC82 1133 aaKnown RBP4.68□□□□□ -1.66
CLTC-209ENST00000498711 HS2ST1Q7LGA3 356 aa4.68□□□□□ -1.66
CLTC-209ENST00000498711 TTC16Q8NEE8 873 aa4.68□□□□□ -1.66
CLTC-209ENST00000498711 MYRIPQ8NFW9 859 aa4.68□□□□□ -1.66
CLTC-209ENST00000498711 ZDHHC1Q8WTX9 485 aa4.68□□□□□ -1.66
CLTC-209ENST00000498711 TM6SF1Q9BZW5 370 aa4.68□□□□□ -1.66
CLTC-209ENST00000498711 KLK14Q9P0G3 267 aa4.68□□□□□ -1.66
CLTC-209ENST00000498711 MAP3K19Q56UN5 1328 aa4.68□□□□□ -1.66
CLTC-209ENST00000498711 WDR33Q9C0J8 1336 aaKnown RBP4.68□□□□□ -1.66
CLTC-209ENST00000498711 FLT4P35916 1363 aa4.68□□□□□ -1.66
CLTC-209ENST00000498711 CEMIPQ8WUJ3 1361 aa4.68□□□□□ -1.66
CLTC-209ENST00000498711 MRC1P22897 1456 aa4.68□□□□□ -1.66
CLTC-209ENST00000498711 SGSM2O43147 1006 aa4.67□□□□□ -1.66
CLTC-209ENST00000498711 RPLP1P05386 114 aaKnown RBP4.67□□□□□ -1.66
CLTC-209ENST00000498711 HOXB7P09629 217 aa4.67□□□□□ -1.66
CLTC-209ENST00000498711 RPIAP49247 311 aa4.67□□□□□ -1.66
CLTC-209ENST00000498711 VPS72Q15906 364 aa4.67□□□□□ -1.66
CLTC-209ENST00000498711 CCDC144BQ3MJ40 725 aa4.67□□□□□ -1.66
CLTC-209ENST00000498711 USP48Q86UV5 1035 aa4.67□□□□□ -1.66
CLTC-209ENST00000498711 SMAP1Q8IYB5 467 aaPredicted RBP4.67□□□□□ -1.66
CLTC-209ENST00000498711 ANKRD13AQ8IZ07 590 aa4.67□□□□□ -1.66
CLTC-209ENST00000498711 PIBF1Q8WXW3 757 aa4.67□□□□□ -1.66
CLTC-209ENST00000498711 SYAP1Q96A49 352 aaPredicted RBP4.67□□□□□ -1.66
CLTC-209ENST00000498711 USP44Q9H0E7 712 aa4.67□□□□□ -1.66
CLTC-209ENST00000498711 FAM13BQ9NYF5 915 aa4.67□□□□□ -1.66
CLTC-209ENST00000498711 ACEP12821 1306 aa4.67□□□□□ -1.66
CLTC-209ENST00000498711 AFF2P51816 1311 aa4.67□□□□□ -1.66
CLTC-209ENST00000498711 HEG1Q9ULI3 1381 aa4.67□□□□□ -1.66
CLTC-209ENST00000498711 CICQ96RK0 1608 aaPredicted RBP4.67□□□□□ -1.66
CLTC-209ENST00000498711 NHSQ6T4R5 1651 aa4.67□□□□□ -1.66
CLTC-209ENST00000498711 OVOS2A0A0G2JMS6 1433 aa4.67□□□□□ -1.66
CLTC-209ENST00000498711 PNMA6EA0A0J9YXQ4 647 aa4.67□□□□□ -1.66
CLTC-209ENST00000498711 SYCE3A1L190 88 aa4.67□□□□□ -1.66
CLTC-209ENST00000498711 MCCP23508 829 aa4.67□□□□□ -1.66
CLTC-209ENST00000498711 NEK4P51957 841 aa4.67□□□□□ -1.66
CLTC-209ENST00000498711 CCDC183Q5T5S1 534 aa4.67□□□□□ -1.66
CLTC-209ENST00000498711 CCDC171Q6TFL3 1326 aa4.67□□□□□ -1.66
CLTC-209ENST00000498711 MCM10Q7L590 875 aa4.67□□□□□ -1.66
CLTC-209ENST00000498711 RAD50Q92878 1312 aa4.67□□□□□ -1.66
CLTC-209ENST00000498711 PHACTR1Q9C0D0 580 aa4.67□□□□□ -1.66
CLTC-209ENST00000498711 HCSTQ9UBK5 93 aa4.67□□□□□ -1.66
CLTC-209ENST00000498711 HCN4Q9Y3Q4 1203 aa4.67□□□□□ -1.66
CLTC-209ENST00000498711 PCDHGB7Q9Y5F8 929 aa4.67□□□□□ -1.66
CLTC-209ENST00000498711 CPNE3O75131 537 aaKnown RBP4.66□□□□□ -1.66
CLTC-209ENST00000498711 GADD45BO75293 160 aaPredicted RBP4.66□□□□□ -1.66
CLTC-209ENST00000498711 RXRBP28702 533 aa4.66□□□□□ -1.66
CLTC-209ENST00000498711 GGCXP38435 758 aa4.66□□□□□ -1.66
CLTC-209ENST00000498711 RACK1P63244 317 aaKnown RBP4.66□□□□□ -1.66
CLTC-209ENST00000498711 CLN3Q13286 438 aa4.66□□□□□ -1.66
CLTC-209ENST00000498711 UTP14CQ5TAP6 766 aaKnown RBP4.66□□□□□ -1.66
CLTC-209ENST00000498711 MEX3CQ5U5Q3 659 aaKnown RBP4.66□□□□□ -1.66
CLTC-209ENST00000498711 CCDC30Q5VVM6 783 aa4.66□□□□□ -1.66
CLTC-209ENST00000498711 RBM43Q6ZSC3 357 aaKnown RBP4.66□□□□□ -1.66
CLTC-209ENST00000498711 TREML1Q86YW5 311 aa4.66□□□□□ -1.66
CLTC-209ENST00000498711 UNC5CLQ8IV45 518 aa4.66□□□□□ -1.66
CLTC-209ENST00000498711 GPR152Q8TDT2 470 aa4.66□□□□□ -1.66
CLTC-209ENST00000498711 IL25Q9H293 177 aa4.66□□□□□ -1.66
CLTC-209ENST00000498711 USP25Q9UHP3 1055 aa4.66□□□□□ -1.66
CLTC-209ENST00000498711 SNX14Q9Y5W7 946 aa4.66□□□□□ -1.66
CLTC-209ENST00000498711 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.66□□□□□ -1.666e-11■□□□□ 9.9
CLTC-209ENST00000498711 ZNF831Q5JPB2 1677 aa4.66□□□□□ -1.66
CLTC-209ENST00000498711 TTC41PQ6P2S7 1318 aa4.66□□□□□ -1.66
CLTC-209ENST00000498711 TPM3P06753 285 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms