RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 MAP3K12Q12852 859 aa19.62■□□□□ 0.73
NR1H3-227ENST00000498548 PALD1Q9ULE6 856 aa19.62■□□□□ 0.73
NR1H3-227ENST00000498548 AFG3L2Q9Y4W6 797 aa19.62■□□□□ 0.73
NR1H3-227ENST00000498548 FLT1P17948 1338 aa19.61■□□□□ 0.73
NR1H3-227ENST00000498548 ZSWIM8A7E2V4 1837 aa19.61■□□□□ 0.73
NR1H3-227ENST00000498548 ATAD5Q96QE3 1844 aa19.61■□□□□ 0.73
NR1H3-227ENST00000498548 GOLIM4O00461 696 aa19.61■□□□□ 0.73
NR1H3-227ENST00000498548 CXCL11O14625 94 aa19.61■□□□□ 0.73
NR1H3-227ENST00000498548 TLR2O60603 784 aa19.61■□□□□ 0.73
NR1H3-227ENST00000498548 GPAT2Q6NUI2 795 aa19.61■□□□□ 0.73
NR1H3-227ENST00000498548 GADL1Q6ZQY3 521 aa19.61■□□□□ 0.73
NR1H3-227ENST00000498548 ANKRD23Q86SG2 305 aa19.61■□□□□ 0.73
NR1H3-227ENST00000498548 BOLA2Q9H3K6 86 aa19.61■□□□□ 0.73
NR1H3-227ENST00000498548 EFCC1Q9HA90 598 aa19.61■□□□□ 0.73
NR1H3-227ENST00000498548 CPA4Q9UI42 421 aa19.61■□□□□ 0.73
NR1H3-227ENST00000498548 COL2A1P02458 1487 aaPredicted RBP19.6■□□□□ 0.73
NR1H3-227ENST00000498548 TRIM75PA6NK02 468 aa19.6■□□□□ 0.73
NR1H3-227ENST00000498548 PI4KBQ9UBF8 816 aa19.6■□□□□ 0.73
NR1H3-227ENST00000498548 MYH1P12882 1939 aa19.6■□□□□ 0.73
NR1H3-227ENST00000498548 PTPRFP10586 1907 aa19.59■□□□□ 0.73
NR1H3-227ENST00000498548 RGS19P49795 217 aa19.59■□□□□ 0.73
NR1H3-227ENST00000498548 LRRCC1Q9C099 1032 aa19.59■□□□□ 0.73
NR1H3-227ENST00000498548 ARHGAP39Q9C0H5 1083 aa19.59■□□□□ 0.73
NR1H3-227ENST00000498548 DHX36Q9H2U1 1008 aaKnown RBP19.59■□□□□ 0.73
NR1H3-227ENST00000498548 ZCCHC17Q9NP64 241 aaKnown RBP19.59■□□□□ 0.73
NR1H3-227ENST00000498548 A0A0G2JLL6 359 aaPredicted RBP19.58■□□□□ 0.72
NR1H3-227ENST00000498548 IGSF3O75054 1194 aa19.58■□□□□ 0.72
NR1H3-227ENST00000498548 CAP2P40123 477 aa19.58■□□□□ 0.72
NR1H3-227ENST00000498548 USP5P45974 858 aa19.58■□□□□ 0.72
NR1H3-227ENST00000498548 TTF1Q15361 905 aaPredicted RBP19.58■□□□□ 0.72
NR1H3-227ENST00000498548 SHROOM1Q2M3G4 852 aaPredicted RBP19.58■□□□□ 0.72
NR1H3-227ENST00000498548 SLFNL1Q499Z3 407 aa19.58■□□□□ 0.72
NR1H3-227ENST00000498548 SLC9C2Q5TAH2 1124 aa19.58■□□□□ 0.72
NR1H3-227ENST00000498548 PRRT2Q7Z6L0 340 aaPredicted RBP19.58■□□□□ 0.72
NR1H3-227ENST00000498548 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.58■□□□□ 0.72
NR1H3-227ENST00000498548 DNAJC18Q9H819 358 aa19.58■□□□□ 0.72
NR1H3-227ENST00000498548 PTPN22Q9Y2R2 807 aa19.58■□□□□ 0.72
NR1H3-227ENST00000498548 CYP2C8P10632 490 aa19.57■□□□□ 0.72
NR1H3-227ENST00000498548 PDE6AP16499 860 aa19.57■□□□□ 0.72
NR1H3-227ENST00000498548 RRP1P56182 461 aaKnown RBP19.57■□□□□ 0.72
NR1H3-227ENST00000498548 JAG1P78504 1218 aa19.57■□□□□ 0.72
NR1H3-227ENST00000498548 MLLT1Q03111 559 aaPredicted RBP19.57■□□□□ 0.72
NR1H3-227ENST00000498548 C17orf99Q6UX52 265 aa19.57■□□□□ 0.72
NR1H3-227ENST00000498548 CRACR2BQ8N4Y2 399 aaPredicted RBP19.57■□□□□ 0.72
NR1H3-227ENST00000498548 HERC5Q9UII4 1024 aaKnown RBP19.57■□□□□ 0.72
NR1H3-227ENST00000498548 PCDHB15Q9Y5E8 787 aa19.57■□□□□ 0.72
NR1H3-227ENST00000498548 ZNF532Q9HCE3 1301 aa19.56■□□□□ 0.72
NR1H3-227ENST00000498548 MAGEB6P1A0A0J9YX57 407 aa19.56■□□□□ 0.72
NR1H3-227ENST00000498548 ATP5JP18859 108 aa19.56■□□□□ 0.72
NR1H3-227ENST00000498548 SPP2Q13103 211 aa19.56■□□□□ 0.72
NR1H3-227ENST00000498548 FASTKD5Q7L8L6 764 aaKnown RBP19.56■□□□□ 0.72
NR1H3-227ENST00000498548 FOXP4Q8IVH2 680 aaPredicted RBP19.56■□□□□ 0.72
NR1H3-227ENST00000498548 RIOK1Q9BRS2 568 aaKnown RBP19.56■□□□□ 0.72
NR1H3-227ENST00000498548 TRIM34Q9BYJ4 488 aa19.56■□□□□ 0.72
NR1H3-227ENST00000498548 GDF11O95390 407 aa19.55■□□□□ 0.72
NR1H3-227ENST00000498548 CHGBP05060 677 aa19.55■□□□□ 0.72
NR1H3-227ENST00000498548 CTGFP29279 349 aa19.55■□□□□ 0.72
NR1H3-227ENST00000498548 LACTBP83111 547 aaPredicted RBP19.55■□□□□ 0.72
NR1H3-227ENST00000498548 DCTPP1Q9H773 170 aa19.55■□□□□ 0.72
NR1H3-227ENST00000498548 PAG1Q9NWQ8 432 aa19.55■□□□□ 0.72
NR1H3-227ENST00000498548 ADGRA2Q96PE1 1338 aa19.54■□□□□ 0.72
NR1H3-227ENST00000498548 TCRBV5S4A2TA0A5A2 114 aa19.54■□□□□ 0.72
NR1H3-227ENST00000498548 USP17L5A8MUK1 530 aa19.54■□□□□ 0.72
NR1H3-227ENST00000498548 HLA-DOAP06340 250 aa19.54■□□□□ 0.72
NR1H3-227ENST00000498548 CRBNQ96SW2 442 aa19.54■□□□□ 0.72
NR1H3-227ENST00000498548 HAUS7Q99871 368 aa19.54■□□□□ 0.72
NR1H3-227ENST00000498548 PTCH2Q9Y6C5 1203 aa19.54■□□□□ 0.72
NR1H3-227ENST00000498548 KIF22Q14807 665 aa19.53■□□□□ 0.72
NR1H3-227ENST00000498548 TREML2Q5T2D2 321 aa19.53■□□□□ 0.72
NR1H3-227ENST00000498548 METTL16Q86W50 562 aaKnown RBP19.53■□□□□ 0.72
NR1H3-227ENST00000498548 ZNF280CQ8ND82 737 aa19.53■□□□□ 0.72
NR1H3-227ENST00000498548 PARK7Q99497 189 aaKnown RBP19.53■□□□□ 0.72
NR1H3-227ENST00000498548 HMGCS2P54868 508 aa19.52■□□□□ 0.72
NR1H3-227ENST00000498548 EVX2Q03828 476 aa19.52■□□□□ 0.72
NR1H3-227ENST00000498548 ARHGEF6Q15052 776 aa19.52■□□□□ 0.72
NR1H3-227ENST00000498548 TSHZ3Q63HK5 1081 aa19.52■□□□□ 0.72
NR1H3-227ENST00000498548 LCORLQ8N3X6 602 aa19.52■□□□□ 0.72
NR1H3-227ENST00000498548 ARMT1Q9H993 441 aa19.52■□□□□ 0.72
NR1H3-227ENST00000498548 ADD2P35612 726 aa19.51■□□□□ 0.71
NR1H3-227ENST00000498548 PSMC4P43686 418 aa19.51■□□□□ 0.71
NR1H3-227ENST00000498548 PLCD1P51178 756 aa19.51■□□□□ 0.71
NR1H3-227ENST00000498548 CERS3Q8IU89 383 aa19.51■□□□□ 0.71
NR1H3-227ENST00000498548 SDR42E1Q8WUS8 393 aa19.51■□□□□ 0.71
NR1H3-227ENST00000498548 AGTPBP1Q9UPW5 1226 aa19.51■□□□□ 0.71
NR1H3-227ENST00000498548 NAV1Q8NEY1 1877 aa19.5■□□□□ 0.71
NR1H3-227ENST00000498548 FMNL1O95466 1100 aaPredicted RBP19.5■□□□□ 0.71
NR1H3-227ENST00000498548 POLR3DP05423 398 aaPredicted RBP19.5■□□□□ 0.71
NR1H3-227ENST00000498548 BCRP11274 1271 aa19.5■□□□□ 0.71
NR1H3-227ENST00000498548 TMED8Q6PL24 325 aaPredicted RBP19.5■□□□□ 0.71
NR1H3-227ENST00000498548 TRIM47Q96LD4 638 aa19.5■□□□□ 0.71
NR1H3-227ENST00000498548 CRNKL1Q9BZJ0 848 aaKnown RBP19.5■□□□□ 0.71
NR1H3-227ENST00000498548 AS3MTQ9HBK9 375 aa19.5■□□□□ 0.71
NR1H3-227ENST00000498548 ZBTB21Q9ULJ3 1066 aa19.5■□□□□ 0.71
NR1H3-227ENST00000498548 MYH7P12883 1935 aa19.5■□□□□ 0.71
NR1H3-227ENST00000498548 PRKAB2O43741 272 aa19.49■□□□□ 0.71
NR1H3-227ENST00000498548 ASNSP08243 561 aa19.49■□□□□ 0.71
NR1H3-227ENST00000498548 TTC6Q86TZ1 520 aa19.49■□□□□ 0.71
NR1H3-227ENST00000498548 ECHDC1Q9NTX5 307 aa19.49■□□□□ 0.71
NR1H3-227ENST00000498548 SLC45A1Q9Y2W3 748 aa19.49■□□□□ 0.71
NR1H3-227ENST00000498548 MGAMO43451 1857 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms