RNA–Protein interactions for RNA: ENST00000498463.5

SNX13-212, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-212ENST00000498463 KLHL6Q8WZ60 621 aa11.16□□□□□ -0.62
SNX13-212ENST00000498463 SLC9A7Q96T83 725 aa11.16□□□□□ -0.62
SNX13-212ENST00000498463 ZC3H12CQ9C0D7 883 aaKnown RBP11.16□□□□□ -0.62
SNX13-212ENST00000498463 TCEAL9Q9UHQ7 104 aa11.16□□□□□ -0.62
SNX13-212ENST00000498463 MCM8Q9UJA3 840 aa11.16□□□□□ -0.62
SNX13-212ENST00000498463 SLC6A14Q9UN76 642 aa11.16□□□□□ -0.62
SNX13-212ENST00000498463 PHF24Q9UPV7 400 aa11.16□□□□□ -0.62
SNX13-212ENST00000498463 CCDC163A0A0D9SF12 145 aa11.15□□□□□ -0.62
SNX13-212ENST00000498463 FAM86C2PA6NEL3 165 aa11.15□□□□□ -0.62
SNX13-212ENST00000498463 TNFRSF10CO14798 259 aa11.15□□□□□ -0.62
SNX13-212ENST00000498463 NFKB2Q00653 900 aa11.15□□□□□ -0.62
SNX13-212ENST00000498463 CTBSQ01459 385 aa11.15□□□□□ -0.62
SNX13-212ENST00000498463 GORABQ5T7V8 394 aa11.15□□□□□ -0.62
SNX13-212ENST00000498463 FOXB2Q5VYV0 432 aa11.15□□□□□ -0.62
SNX13-212ENST00000498463 ELMSAN1Q6PJG2 1045 aa11.15□□□□□ -0.62
SNX13-212ENST00000498463 RNF180Q86T96 592 aa11.15□□□□□ -0.62
SNX13-212ENST00000498463 EXOC8Q8IYI6 725 aa11.15□□□□□ -0.62
SNX13-212ENST00000498463 CCDC155Q8N6L0 562 aa11.15□□□□□ -0.62
SNX13-212ENST00000498463 CNNM2Q9H8M5 875 aa11.15□□□□□ -0.62
SNX13-212ENST00000498463 NCOA5Q9HCD5 579 aaKnown RBP11.15□□□□□ -0.62
SNX13-212ENST00000498463 SNCAIPQ9Y6H5 919 aa11.15□□□□□ -0.62
SNX13-212ENST00000498463 ALG1L2C9J202 215 aa11.14□□□□□ -0.63
SNX13-212ENST00000498463 SOX1O00570 391 aaPredicted RBP11.14□□□□□ -0.63
SNX13-212ENST00000498463 PRC1O43663 620 aa11.14□□□□□ -0.63
SNX13-212ENST00000498463 SIN3BO75182 1162 aa11.14□□□□□ -0.63
SNX13-212ENST00000498463 PMLP29590 882 aa11.14□□□□□ -0.63
SNX13-212ENST00000498463 SMCPP49901 116 aaPredicted RBP11.14□□□□□ -0.63
SNX13-212ENST00000498463 CABP4P57796 275 aa11.14□□□□□ -0.63
SNX13-212ENST00000498463 FAM50AQ14320 339 aaKnown RBP11.14□□□□□ -0.63
SNX13-212ENST00000498463 CDCP2Q5VXM1 449 aa11.14□□□□□ -0.63
SNX13-212ENST00000498463 HDXQ7Z353 690 aa11.14□□□□□ -0.63
SNX13-212ENST00000498463 UBR7Q8N806 425 aa11.14□□□□□ -0.63
SNX13-212ENST00000498463 GMCL1Q96IK5 515 aa11.14□□□□□ -0.63
SNX13-212ENST00000498463 EXOC2Q96KP1 924 aa11.14□□□□□ -0.63
SNX13-212ENST00000498463 PLA2G2EQ9NZK7 142 aa11.14□□□□□ -0.63
SNX13-212ENST00000498463 GSG1L2A8MUP6 293 aa11.13□□□□□ -0.63
SNX13-212ENST00000498463 PLCG1P19174 1290 aa11.13□□□□□ -0.63
SNX13-212ENST00000498463 L1CAMP32004 1257 aa11.13□□□□□ -0.63
SNX13-212ENST00000498463 SLC7A5Q01650 507 aa11.13□□□□□ -0.63
SNX13-212ENST00000498463 C8orf48Q96LL4 319 aa11.13□□□□□ -0.63
SNX13-212ENST00000498463 KIF2CQ99661 725 aa11.13□□□□□ -0.63
SNX13-212ENST00000498463 SOX17Q9H6I2 414 aaPredicted RBP11.13□□□□□ -0.63
SNX13-212ENST00000498463 PDZRN3Q9UPQ7 1066 aa11.13□□□□□ -0.63
SNX13-212ENST00000498463 H3BRJ5 948 aa11.12□□□□□ -0.63
SNX13-212ENST00000498463 RAPGEF3O95398 923 aa11.12□□□□□ -0.63
SNX13-212ENST00000498463 CDC27P30260 824 aa11.12□□□□□ -0.63
SNX13-212ENST00000498463 GSTM4Q03013 218 aa11.12□□□□□ -0.63
SNX13-212ENST00000498463 CCAR1Q8IX12 1150 aaKnown RBP11.12□□□□□ -0.63
SNX13-212ENST00000498463 KISS1RQ969F8 398 aaPredicted RBP11.12□□□□□ -0.63
SNX13-212ENST00000498463 LPIN3Q9BQK8 851 aa11.12□□□□□ -0.63
SNX13-212ENST00000498463 GEMIN8Q9NWZ8 242 aaKnown RBP11.12□□□□□ -0.63
SNX13-212ENST00000498463 KLHL3Q9UH77 587 aa11.12□□□□□ -0.63
SNX13-212ENST00000498463 ZNF214Q9UL59 606 aaPredicted RBP11.12□□□□□ -0.63
SNX13-212ENST00000498463 TACC3Q9Y6A5 838 aa11.12□□□□□ -0.63
SNX13-212ENST00000498463 ECEL1O95672 775 aa11.11□□□□□ -0.63
SNX13-212ENST00000498463 GNPTABQ3T906 1256 aa11.11□□□□□ -0.63
SNX13-212ENST00000498463 TMEM201Q5SNT2 666 aa11.11□□□□□ -0.63
SNX13-212ENST00000498463 TNFRSF25Q93038 417 aa11.11□□□□□ -0.63
SNX13-212ENST00000498463 RUSC1Q9BVN2 902 aa11.11□□□□□ -0.63
SNX13-212ENST00000498463 CCDC86Q9H6F5 360 aaKnown RBP11.11□□□□□ -0.63
SNX13-212ENST00000498463 KRT82Q9NSB4 513 aa11.11□□□□□ -0.63
SNX13-212ENST00000498463 MAPRE3Q9UPY8 281 aa11.11□□□□□ -0.63
SNX13-212ENST00000498463 MRPS23Q9Y3D9 190 aaKnown RBP11.11□□□□□ -0.63
SNX13-212ENST00000498463 AGRPO00253 132 aa11.1□□□□□ -0.63
SNX13-212ENST00000498463 PLD2O14939 933 aa11.1□□□□□ -0.63
SNX13-212ENST00000498463 ALDH1L1O75891 902 aa11.1□□□□□ -0.63
SNX13-212ENST00000498463 PCBP4P57723 403 aaKnown RBP11.1□□□□□ -0.63
SNX13-212ENST00000498463 PDE4BQ07343 736 aa11.1□□□□□ -0.63
SNX13-212ENST00000498463 AKAP4Q5JQC9 854 aa11.1□□□□□ -0.63
SNX13-212ENST00000498463 GDF6Q6KF10 455 aaPredicted RBP11.1□□□□□ -0.63
SNX13-212ENST00000498463 AFAP1L2Q8N4X5 818 aa11.1□□□□□ -0.63
SNX13-212ENST00000498463 MORC4Q8TE76 937 aa11.1□□□□□ -0.63
SNX13-212ENST00000498463 TSR2Q969E8 191 aaKnown RBP11.1□□□□□ -0.63
SNX13-212ENST00000498463 ARHGEF4Q9NR80 690 aa11.1□□□□□ -0.63
SNX13-212ENST00000498463 CYP11A1P05108 521 aa11.09□□□□□ -0.63
SNX13-212ENST00000498463 ITGA6P23229 1130 aa11.09□□□□□ -0.63
SNX13-212ENST00000498463 ADH7P40394 386 aa11.09□□□□□ -0.63
SNX13-212ENST00000498463 FNDC3BQ53EP0 1204 aaKnown RBP11.09□□□□□ -0.63
SNX13-212ENST00000498463 FAM209AQ5JX71 171 aa11.09□□□□□ -0.63
SNX13-212ENST00000498463 SLC7A3Q8WY07 619 aa11.09□□□□□ -0.63
SNX13-212ENST00000498463 ELMO3Q96BJ8 720 aa11.09□□□□□ -0.63
SNX13-212ENST00000498463 CDC6Q99741 560 aa11.09□□□□□ -0.63
SNX13-212ENST00000498463 CORO1BQ9BR76 489 aa11.09□□□□□ -0.63
SNX13-212ENST00000498463 DHRS4Q9BTZ2 278 aa11.09□□□□□ -0.63
SNX13-212ENST00000498463 TARS2Q9BW92 718 aaKnown RBP11.09□□□□□ -0.63
SNX13-212ENST00000498463 NRSN2Q9GZP1 204 aa11.09□□□□□ -0.63
SNX13-212ENST00000498463 FRRS1LQ9P0K9 344 aa11.09□□□□□ -0.63
SNX13-212ENST00000498463 A0A1W2PQU0 124 aa11.08□□□□□ -0.64
SNX13-212ENST00000498463 EPHB1P54762 984 aa11.08□□□□□ -0.64
SNX13-212ENST00000498463 TTF1Q15361 905 aaPredicted RBP11.08□□□□□ -0.64
SNX13-212ENST00000498463 CYFIP1Q7L576 1253 aa11.08□□□□□ -0.64
SNX13-212ENST00000498463 PMM1Q92871 262 aa11.08□□□□□ -0.64
SNX13-212ENST00000498463 CLUHP3Q96NS8 147 aa11.08□□□□□ -0.64
SNX13-212ENST00000498463 AXIN1O15169 862 aa11.07□□□□□ -0.64
SNX13-212ENST00000498463 CDC25BP30305 580 aa11.07□□□□□ -0.64
SNX13-212ENST00000498463 POLR2BP30876 1174 aaKnown RBP11.07□□□□□ -0.64
SNX13-212ENST00000498463 CCNFP41002 786 aa11.07□□□□□ -0.64
SNX13-212ENST00000498463 SV2CQ496J9 727 aa11.07□□□□□ -0.64
SNX13-212ENST00000498463 YOD1Q5VVQ6 348 aaPredicted RBP11.07□□□□□ -0.64
SNX13-212ENST00000498463 WWC2Q6AWC2 1192 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms