RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 CRISPLD2Q9H0B8 497 aa19.89■□□□□ 0.77
MUC1-220ENST00000498431 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.89■□□□□ 0.77
MUC1-220ENST00000498431 HMG20BQ9P0W2 317 aa19.89■□□□□ 0.77
MUC1-220ENST00000498431 SOX1O00570 391 aaPredicted RBP19.88■□□□□ 0.77
MUC1-220ENST00000498431 SRGAP3O43295 1099 aa19.88■□□□□ 0.77
MUC1-220ENST00000498431 EVI5O60447 810 aa19.88■□□□□ 0.77
MUC1-220ENST00000498431 MVPQ14764 893 aaKnown RBP19.88■□□□□ 0.77
MUC1-220ENST00000498431 PROCA1Q8NCQ7 364 aaPredicted RBP19.88■□□□□ 0.77
MUC1-220ENST00000498431 COA7Q96BR5 231 aa19.88■□□□□ 0.77
MUC1-220ENST00000498431 NSUN4Q96CB9 384 aaKnown RBP19.88■□□□□ 0.77
MUC1-220ENST00000498431 PAWRQ96IZ0 340 aaKnown RBP19.88■□□□□ 0.77
MUC1-220ENST00000498431 NPM3O75607 178 aaKnown RBP19.87■□□□□ 0.77
MUC1-220ENST00000498431 HMGCS2P54868 508 aa19.87■□□□□ 0.77
MUC1-220ENST00000498431 NEUROD6Q96NK8 337 aa19.87■□□□□ 0.77
MUC1-220ENST00000498431 OSBPL5Q9H0X9 879 aaPredicted RBP19.87■□□□□ 0.77
MUC1-220ENST00000498431 HDAC5Q9UQL6 1122 aa19.87■□□□□ 0.77
MUC1-220ENST00000498431 AKAP2Q9Y2D5 859 aa19.87■□□□□ 0.77
MUC1-220ENST00000498431 SIPA1L1O43166 1804 aa19.86■□□□□ 0.77
MUC1-220ENST00000498431 TRIM32Q13049 653 aa19.86■□□□□ 0.77
MUC1-220ENST00000498431 SPATA5Q8NB90 893 aa19.86■□□□□ 0.77
MUC1-220ENST00000498431 ZNF280CQ8ND82 737 aa19.86■□□□□ 0.77
MUC1-220ENST00000498431 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.86■□□□□ 0.77
MUC1-220ENST00000498431 STAP2Q9UGK3 403 aa19.86■□□□□ 0.77
MUC1-220ENST00000498431 PNMA3Q9UL41 463 aa19.86■□□□□ 0.77
MUC1-220ENST00000498431 COL2A1P02458 1487 aaPredicted RBP19.86■□□□□ 0.77
MUC1-220ENST00000498431 PLXNB2O15031 1838 aa19.86■□□□□ 0.77
MUC1-220ENST00000498431 CT47B1P0C2W7 299 aaPredicted RBP19.85■□□□□ 0.77
MUC1-220ENST00000498431 CAP2P40123 477 aa19.85■□□□□ 0.77
MUC1-220ENST00000498431 MTX1Q13505 466 aa19.85■□□□□ 0.77
MUC1-220ENST00000498431 LRCH3Q96II8 777 aa19.85■□□□□ 0.77
MUC1-220ENST00000498431 ASCC2Q9H1I8 757 aaPredicted RBP19.85■□□□□ 0.77
MUC1-220ENST00000498431 GJD2Q9UKL4 321 aa19.85■□□□□ 0.77
MUC1-220ENST00000498431 RAI14Q9P0K7 980 aa19.84■□□□□ 0.77
MUC1-220ENST00000498431 DNAH12Q6ZR08 3092 aa19.83■□□□□ 0.77
MUC1-220ENST00000498431 PEX10O60683 326 aa19.83■□□□□ 0.77
MUC1-220ENST00000498431 HMGCRP04035 888 aa19.83■□□□□ 0.77
MUC1-220ENST00000498431 LDHCP07864 332 aa19.83■□□□□ 0.77
MUC1-220ENST00000498431 ARID4AP29374 1257 aaPredicted RBP19.83■□□□□ 0.77
MUC1-220ENST00000498431 MCAMP43121 646 aa19.83■□□□□ 0.77
MUC1-220ENST00000498431 GCLCP48506 637 aaPredicted RBP19.83■□□□□ 0.77
MUC1-220ENST00000498431 RARSP54136 660 aaKnown RBP19.83■□□□□ 0.77
MUC1-220ENST00000498431 GSTO1P78417 241 aa19.83■□□□□ 0.77
MUC1-220ENST00000498431 JAG1P78504 1218 aa19.83■□□□□ 0.77
MUC1-220ENST00000498431 TEX11Q8IYF3 940 aa19.83■□□□□ 0.77
MUC1-220ENST00000498431 SH3RF3Q8TEJ3 882 aaPredicted RBP19.83■□□□□ 0.77
MUC1-220ENST00000498431 A0A1W2PPC1 479 aa19.82■□□□□ 0.76
MUC1-220ENST00000498431 USP17L5A8MUK1 530 aa19.82■□□□□ 0.76
MUC1-220ENST00000498431 GNAI3P08754 354 aa19.82■□□□□ 0.76
MUC1-220ENST00000498431 MNX1P50219 401 aaPredicted RBP19.82■□□□□ 0.76
MUC1-220ENST00000498431 SHROOM1Q2M3G4 852 aaPredicted RBP19.82■□□□□ 0.76
MUC1-220ENST00000498431 SH3D19Q5HYK7 790 aa19.82■□□□□ 0.76
MUC1-220ENST00000498431 GORABQ5T7V8 394 aa19.82■□□□□ 0.76
MUC1-220ENST00000498431 NECAB2Q7Z6G3 386 aa19.82■□□□□ 0.76
MUC1-220ENST00000498431 TNNQ9UQP3 1299 aa19.82■□□□□ 0.76
MUC1-220ENST00000498431 DDX60LQ5H9U9 1706 aaKnown RBP19.82■□□□□ 0.76
MUC1-220ENST00000498431 MAP4K4O95819 1239 aaPredicted RBP19.81■□□□□ 0.76
MUC1-220ENST00000498431 CAPN2P17655 700 aa19.81■□□□□ 0.76
MUC1-220ENST00000498431 C7orf61Q8IZ16 206 aa19.81■□□□□ 0.76
MUC1-220ENST00000498431 CDK5RAP2Q96SN8 1893 aa19.81■□□□□ 0.76
MUC1-220ENST00000498431 LAMA2P24043 3122 aaKnown RBP19.8■□□□□ 0.76
MUC1-220ENST00000498431 PNMA6EA0A0J9YXQ4 647 aa19.8■□□□□ 0.76
MUC1-220ENST00000498431 PABPC4Q13310 644 aaKnown RBP eCLIP19.8■□□□□ 0.766e-14■■■□□ 18
MUC1-220ENST00000498431 MTMR2Q13614 643 aa19.8■□□□□ 0.76
MUC1-220ENST00000498431 TRIB2Q92519 343 aa19.8■□□□□ 0.76
MUC1-220ENST00000498431 GDF15Q99988 308 aa19.8■□□□□ 0.76
MUC1-220ENST00000498431 TBC1D2Q9BYX2 928 aa19.8■□□□□ 0.76
MUC1-220ENST00000498431 DNAJC18Q9H819 358 aa19.8■□□□□ 0.76
MUC1-220ENST00000498431 MORF4L1Q9UBU8 362 aa19.8■□□□□ 0.76
MUC1-220ENST00000498431 HERC5Q9UII4 1024 aaKnown RBP19.8■□□□□ 0.76
MUC1-220ENST00000498431 ZMYND8Q9ULU4 1186 aaPredicted RBP19.8■□□□□ 0.76
MUC1-220ENST00000498431 RPTORQ8N122 1335 aa19.79■□□□□ 0.76
MUC1-220ENST00000498431 ANKLE1Q8NAG6 615 aa19.79■□□□□ 0.76
MUC1-220ENST00000498431 ARHGAP45Q92619 1136 aa19.79■□□□□ 0.76
MUC1-220ENST00000498431 TXNRD2Q9NNW7 524 aa19.79■□□□□ 0.76
MUC1-220ENST00000498431 HMX1Q9NP08 348 aaPredicted RBP19.79■□□□□ 0.76
MUC1-220ENST00000498431 SNRKQ9NRH2 765 aa19.79■□□□□ 0.76
MUC1-220ENST00000498431 AATFQ9NY61 560 aaKnown RBP eCLIP19.79■□□□□ 0.76
MUC1-220ENST00000498431 LRP2BPQ9P2M1 347 aa19.79■□□□□ 0.76
MUC1-220ENST00000498431 MAST2Q6P0Q8 1798 aa19.79■□□□□ 0.76
MUC1-220ENST00000498431 MYO5AQ9Y4I1 1855 aaKnown RBP19.78■□□□□ 0.76
MUC1-220ENST00000498431 ADGRA1Q86SQ6 560 aa19.78■□□□□ 0.76
MUC1-220ENST00000498431 P2RX7Q99572 595 aaKnown RBP19.78■□□□□ 0.76
MUC1-220ENST00000498431 WDR18Q9BV38 432 aa19.78■□□□□ 0.76
MUC1-220ENST00000498431 AS3MTQ9HBK9 375 aa19.78■□□□□ 0.76
MUC1-220ENST00000498431 FOCADQ5VW36 1801 aa19.77■□□□□ 0.76
MUC1-220ENST00000498431 CYP2B6P20813 491 aa19.77■□□□□ 0.76
MUC1-220ENST00000498431 BACE1P56817 501 aa19.77■□□□□ 0.76
MUC1-220ENST00000498431 IRX3P78415 501 aaPredicted RBP19.77■□□□□ 0.76
MUC1-220ENST00000498431 MAPKAPK5Q8IW41 473 aa19.77■□□□□ 0.76
MUC1-220ENST00000498431 SLC17A8Q8NDX2 589 aa19.77■□□□□ 0.76
MUC1-220ENST00000498431 NBPF3Q9H094 633 aa19.77■□□□□ 0.76
MUC1-220ENST00000498431 PI4KBQ9UBF8 816 aa19.77■□□□□ 0.76
MUC1-220ENST00000498431 GDF11O95390 407 aa19.76■□□□□ 0.75
MUC1-220ENST00000498431 GNAI2P04899 355 aa19.76■□□□□ 0.75
MUC1-220ENST00000498431 UQCRFS1P1P0C7P4 283 aa19.76■□□□□ 0.75
MUC1-220ENST00000498431 TRIM27P14373 513 aa19.76■□□□□ 0.75
MUC1-220ENST00000498431 SYN1P17600 705 aa19.76■□□□□ 0.75
MUC1-220ENST00000498431 HOXA7P31268 230 aaPredicted RBP19.76■□□□□ 0.75
MUC1-220ENST00000498431 G3BP1Q13283 466 aaKnown RBP eCLIP19.76■□□□□ 0.75
MUC1-220ENST00000498431 MAP3K21Q5TCX8 1036 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms