RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 JADE2Q9NQC1 790 aa3.8□□□□□ -1.8
SNRNP48-202ENST00000496946 FAM105AQ9NUU6 356 aa3.8□□□□□ -1.8
SNRNP48-202ENST00000496946 SYNPO2Q9UMS6 1093 aa3.8□□□□□ -1.8
SNRNP48-202ENST00000496946 TLR6Q9Y2C9 796 aa3.8□□□□□ -1.8
SNRNP48-202ENST00000496946 SPATA31D1Q6ZQQ2 1576 aa3.8□□□□□ -1.8
SNRNP48-202ENST00000496946 CABP4P57796 275 aa3.8□□□□□ -1.8
SNRNP48-202ENST00000496946 C19orf57Q0VDD7 668 aa3.8□□□□□ -1.8
SNRNP48-202ENST00000496946 RSPO4Q2I0M5 234 aaPredicted RBP3.8□□□□□ -1.8
SNRNP48-202ENST00000496946 SMC3Q9UQE7 1217 aa3.8□□□□□ -1.8
SNRNP48-202ENST00000496946 TMA7Q9Y2S6 64 aaKnown RBP3.8□□□□□ -1.8
SNRNP48-202ENST00000496946 MPHOSPH10O00566 681 aaKnown RBP3.79□□□□□ -1.8
SNRNP48-202ENST00000496946 ADAM23O75077 832 aa3.79□□□□□ -1.8
SNRNP48-202ENST00000496946 WDHD1O75717 1129 aaPredicted RBP3.79□□□□□ -1.8
SNRNP48-202ENST00000496946 USP17L7P0C7H9 530 aa3.79□□□□□ -1.8
SNRNP48-202ENST00000496946 HCLS1P14317 486 aaPredicted RBP3.79□□□□□ -1.8
SNRNP48-202ENST00000496946 TDO2P48775 406 aa3.79□□□□□ -1.8
SNRNP48-202ENST00000496946 CDPF1Q6NVV7 123 aa3.79□□□□□ -1.8
SNRNP48-202ENST00000496946 BORCS6Q96GS4 357 aa3.79□□□□□ -1.8
SNRNP48-202ENST00000496946 DMRTB1Q96MA1 342 aa3.79□□□□□ -1.8
SNRNP48-202ENST00000496946 CCDC94Q9BW85 323 aaPredicted RBP3.79□□□□□ -1.8
SNRNP48-202ENST00000496946 ADAM19Q9H013 955 aa3.79□□□□□ -1.8
SNRNP48-202ENST00000496946 KCNF1Q9H3M0 494 aa3.79□□□□□ -1.8
SNRNP48-202ENST00000496946 AP4E1Q9UPM8 1137 aa3.79□□□□□ -1.8
SNRNP48-202ENST00000496946 COMMD10Q9Y6G5 202 aa3.79□□□□□ -1.8
SNRNP48-202ENST00000496946 MYO15BQ96JP2 1530 aa3.79□□□□□ -1.8
SNRNP48-202ENST00000496946 U2SURPO15042 1029 aaKnown RBP3.79□□□□□ -1.8
SNRNP48-202ENST00000496946 CTSHP09668 335 aa3.79□□□□□ -1.8
SNRNP48-202ENST00000496946 CT47B1P0C2W7 299 aaPredicted RBP3.79□□□□□ -1.8
SNRNP48-202ENST00000496946 FAM200BP0CF97 657 aa3.79□□□□□ -1.8
SNRNP48-202ENST00000496946 BMP3P12645 472 aa3.79□□□□□ -1.8
SNRNP48-202ENST00000496946 RAB6AP20340 208 aa3.79□□□□□ -1.8
SNRNP48-202ENST00000496946 UBE3DQ7Z6J8 389 aa3.79□□□□□ -1.8
SNRNP48-202ENST00000496946 TRIM42Q8IWZ5 723 aa3.79□□□□□ -1.8
SNRNP48-202ENST00000496946 AMOTL1Q8IY63 956 aa3.79□□□□□ -1.8
SNRNP48-202ENST00000496946 KCNB2Q92953 911 aa3.79□□□□□ -1.8
SNRNP48-202ENST00000496946 ALKBH8Q96BT7 664 aaKnown RBP3.79□□□□□ -1.8
SNRNP48-202ENST00000496946 SSBP4Q9BWG4 385 aaPredicted RBP3.79□□□□□ -1.8
SNRNP48-202ENST00000496946 SUDS3Q9H7L9 328 aaPredicted RBP3.79□□□□□ -1.8
SNRNP48-202ENST00000496946 CBX8Q9HC52 389 aa3.79□□□□□ -1.8
SNRNP48-202ENST00000496946 PARP2Q9UGN5 583 aa3.79□□□□□ -1.8
SNRNP48-202ENST00000496946 TPX2Q9ULW0 747 aaKnown RBP3.79□□□□□ -1.8
SNRNP48-202ENST00000496946 FAN1Q9Y2M0 1017 aa3.79□□□□□ -1.8
SNRNP48-202ENST00000496946 KAT6BQ8WYB5 2073 aa3.78□□□□□ -1.8
SNRNP48-202ENST00000496946 B3GALT4O96024 378 aa3.78□□□□□ -1.8
SNRNP48-202ENST00000496946 RPLP1P05386 114 aaKnown RBP3.78□□□□□ -1.8
SNRNP48-202ENST00000496946 PDE3AQ14432 1141 aa3.78□□□□□ -1.8
SNRNP48-202ENST00000496946 DZIP1LQ8IYY4 767 aaKnown RBP3.78□□□□□ -1.8
SNRNP48-202ENST00000496946 UTP4Q969X6 686 aaKnown RBP3.78□□□□□ -1.8
SNRNP48-202ENST00000496946 TSPYL1Q9H0U9 437 aa3.78□□□□□ -1.8
SNRNP48-202ENST00000496946 IRF2BPLQ9H1B7 796 aa3.78□□□□□ -1.8
SNRNP48-202ENST00000496946 CCDC86Q9H6F5 360 aaKnown RBP3.78□□□□□ -1.8
SNRNP48-202ENST00000496946 CHPF2Q9P2E5 772 aa3.78□□□□□ -1.8
SNRNP48-202ENST00000496946 KRTAP9-6A0A140TA67 174 aa3.78□□□□□ -1.8
SNRNP48-202ENST00000496946 TMEM238LA0A1B0GVL6 79 aa3.78□□□□□ -1.8
SNRNP48-202ENST00000496946 SPDYE3A6NKU9 549 aa3.78□□□□□ -1.8
SNRNP48-202ENST00000496946 DYRK3O43781 588 aa3.78□□□□□ -1.8
SNRNP48-202ENST00000496946 HSP90AB2PQ58FF8 381 aa3.78□□□□□ -1.8
SNRNP48-202ENST00000496946 TTC9Q92623 222 aa3.78□□□□□ -1.8
SNRNP48-202ENST00000496946 MYCBPQ99417 103 aaPredicted RBP3.78□□□□□ -1.8
SNRNP48-202ENST00000496946 ABCF2Q9UG63 623 aa3.78□□□□□ -1.8
SNRNP48-202ENST00000496946 PPP1R9AQ9ULJ8 1098 aa3.78□□□□□ -1.8
SNRNP48-202ENST00000496946 DAGLAQ9Y4D2 1042 aa3.78□□□□□ -1.8
SNRNP48-202ENST00000496946 FAM177BA6PVY3 158 aa3.77□□□□□ -1.81
SNRNP48-202ENST00000496946 COQ9O75208 318 aa3.77□□□□□ -1.81
SNRNP48-202ENST00000496946 TGFB1P01137 390 aa3.77□□□□□ -1.81
SNRNP48-202ENST00000496946 CCDC172P0C7W6 258 aa3.77□□□□□ -1.81
SNRNP48-202ENST00000496946 BDNFP23560 247 aa3.77□□□□□ -1.81
SNRNP48-202ENST00000496946 ITPKAP23677 461 aa3.77□□□□□ -1.81
SNRNP48-202ENST00000496946 PIP4K2BP78356 416 aa3.77□□□□□ -1.81
SNRNP48-202ENST00000496946 PTPROQ16827 1216 aa3.77□□□□□ -1.81
SNRNP48-202ENST00000496946 NUTM2GQ5VZR2 741 aa3.77□□□□□ -1.81
SNRNP48-202ENST00000496946 FAM117BQ6P1L5 589 aa3.77□□□□□ -1.81
SNRNP48-202ENST00000496946 ZSCAN29Q8IWY8 852 aaPredicted RBP3.77□□□□□ -1.81
SNRNP48-202ENST00000496946 MFSD14AQ96MC6 490 aa3.77□□□□□ -1.81
SNRNP48-202ENST00000496946 RUSC1Q9BVN2 902 aa3.77□□□□□ -1.81
SNRNP48-202ENST00000496946 KRTAP9-2Q9BYQ4 174 aa3.77□□□□□ -1.81
SNRNP48-202ENST00000496946 MRPL18Q9H0U6 180 aaKnown RBP3.77□□□□□ -1.81
SNRNP48-202ENST00000496946 U3KQE9 123 aa3.77□□□□□ -1.81
SNRNP48-202ENST00000496946 SYNRGQ9UMZ2 1314 aa3.77□□□□□ -1.81
SNRNP48-202ENST00000496946 EIF3JO75822 258 aaKnown RBP3.77□□□□□ -1.81
SNRNP48-202ENST00000496946 NFICP08651 508 aa3.77□□□□□ -1.81
SNRNP48-202ENST00000496946 GYS2P54840 703 aa3.77□□□□□ -1.81
SNRNP48-202ENST00000496946 CDC37Q16543 378 aaPredicted RBP3.77□□□□□ -1.81
SNRNP48-202ENST00000496946 EP400NLQ6ZTU2 488 aa3.77□□□□□ -1.81
SNRNP48-202ENST00000496946 CHMP4CQ96CF2 233 aa3.77□□□□□ -1.81
SNRNP48-202ENST00000496946 G3BP2Q9UN86 482 aaKnown RBP3.77□□□□□ -1.81
SNRNP48-202ENST00000496946 ACTL7BQ9Y614 415 aa3.77□□□□□ -1.81
SNRNP48-202ENST00000496946 MED26O95402 600 aa3.76□□□□□ -1.81
SNRNP48-202ENST00000496946 NEFHP12036 1026 aa3.76□□□□□ -1.81
SNRNP48-202ENST00000496946 IBSPP21815 317 aaPredicted RBP3.76□□□□□ -1.81
SNRNP48-202ENST00000496946 PEX19P40855 299 aa3.76□□□□□ -1.81
SNRNP48-202ENST00000496946 CDK5R2Q13319 367 aa3.76□□□□□ -1.81
SNRNP48-202ENST00000496946 C1QTNF12Q5T7M4 302 aa3.76□□□□□ -1.81
SNRNP48-202ENST00000496946 KIAA0319Q5VV43 1072 aa3.76□□□□□ -1.81
SNRNP48-202ENST00000496946 FDX2Q6P4F2 183 aa3.76□□□□□ -1.81
SNRNP48-202ENST00000496946 DYMQ7RTS9 669 aa3.76□□□□□ -1.81
SNRNP48-202ENST00000496946 C12orf40Q86WS4 652 aa3.76□□□□□ -1.81
SNRNP48-202ENST00000496946 CCDC146Q8IYE0 955 aa3.76□□□□□ -1.81
SNRNP48-202ENST00000496946 KLHL23Q8NBE8 558 aa3.76□□□□□ -1.81
SNRNP48-202ENST00000496946 ACRBPQ8NEB7 543 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms