RNA–Protein interactions for RNA: ENST00000496262.1

RNF220-217, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 840 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-217ENST00000496262 SH3RF3Q8TEJ3 882 aaPredicted RBP13.37□□□□□ -0.27
RNF220-217ENST00000496262 DBNDD2Q9BQY9 259 aa13.37□□□□□ -0.27
RNF220-217ENST00000496262 OSBPL5Q9H0X9 879 aaPredicted RBP13.37□□□□□ -0.27
RNF220-217ENST00000496262 AATFQ9NY61 560 aaKnown RBP eCLIP13.37□□□□□ -0.27
RNF220-217ENST00000496262 FPGT-TNNI3KV9GXZ4 949 aa13.37□□□□□ -0.27
RNF220-217ENST00000496262 DOCK1Q14185 1865 aa13.36□□□□□ -0.27
RNF220-217ENST00000496262 GRK4P32298 578 aa13.36□□□□□ -0.27
RNF220-217ENST00000496262 MAP3K10Q02779 954 aa13.36□□□□□ -0.27
RNF220-217ENST00000496262 POLA2Q14181 598 aa13.36□□□□□ -0.27
RNF220-217ENST00000496262 CCDC158Q5M9N0 1113 aa13.36□□□□□ -0.27
RNF220-217ENST00000496262 TREML2Q5T2D2 321 aa13.36□□□□□ -0.27
RNF220-217ENST00000496262 NAA16Q6N069 864 aaPredicted RBP13.36□□□□□ -0.27
RNF220-217ENST00000496262 TAOK2Q9UL54 1235 aa13.36□□□□□ -0.27
RNF220-217ENST00000496262 KIAA0100Q14667 2235 aaKnown RBP13.35□□□□□ -0.27
RNF220-217ENST00000496262 RLBP1P12271 317 aa13.35□□□□□ -0.27
RNF220-217ENST00000496262 ATP8B2P98198 1209 aa13.35□□□□□ -0.27
RNF220-217ENST00000496262 GCC1Q96CN9 775 aa13.35□□□□□ -0.27
RNF220-217ENST00000496262 TLR7Q9NYK1 1049 aaKnown RBP13.35□□□□□ -0.27
RNF220-217ENST00000496262 GABRQQ9UN88 632 aa13.35□□□□□ -0.27
RNF220-217ENST00000496262 TNPO2O14787 897 aaKnown RBP13.34□□□□□ -0.27
RNF220-217ENST00000496262 TBC1D12O60347 775 aa13.34□□□□□ -0.27
RNF220-217ENST00000496262 BAG3O95817 575 aa13.34□□□□□ -0.27
RNF220-217ENST00000496262 HMGCS2P54868 508 aa13.34□□□□□ -0.27
RNF220-217ENST00000496262 SPP2Q13103 211 aa13.34□□□□□ -0.27
RNF220-217ENST00000496262 RRP1BQ14684 758 aaKnown RBP13.34□□□□□ -0.27
RNF220-217ENST00000496262 ADGRA1Q86SQ6 560 aa13.34□□□□□ -0.27
RNF220-217ENST00000496262 MAPKAPK5Q8IW41 473 aa13.34□□□□□ -0.27
RNF220-217ENST00000496262 ANKRD13CQ8N6S4 541 aa13.34□□□□□ -0.27
RNF220-217ENST00000496262 SSH3Q8TE77 659 aa13.34□□□□□ -0.27
RNF220-217ENST00000496262 TGFBRAP1Q8WUH2 860 aa13.34□□□□□ -0.27
RNF220-217ENST00000496262 RNF208Q9H0X6 261 aa13.34□□□□□ -0.27
RNF220-217ENST00000496262 AGTPBP1Q9UPW5 1226 aa13.34□□□□□ -0.27
RNF220-217ENST00000496262 NPM3O75607 178 aaKnown RBP13.33□□□□□ -0.28
RNF220-217ENST00000496262 MAP4K4O95819 1239 aaPredicted RBP13.33□□□□□ -0.28
RNF220-217ENST00000496262 CYP2E1P05181 493 aaPredicted RBP13.33□□□□□ -0.28
RNF220-217ENST00000496262 CCL5P13501 91 aa13.33□□□□□ -0.28
RNF220-217ENST00000496262 ELNP15502 786 aa13.33□□□□□ -0.28
RNF220-217ENST00000496262 ZAP70P43403 619 aa13.33□□□□□ -0.28
RNF220-217ENST00000496262 HABP4Q5JVS0 413 aaKnown RBP13.33□□□□□ -0.28
RNF220-217ENST00000496262 ZNF280CQ8ND82 737 aa13.33□□□□□ -0.28
RNF220-217ENST00000496262 SHISA4Q96DD7 197 aa13.33□□□□□ -0.28
RNF220-217ENST00000496262 TRIM34Q9BYJ4 488 aa13.33□□□□□ -0.28
RNF220-217ENST00000496262 CCDC8Q9H0W5 538 aaPredicted RBP13.33□□□□□ -0.28
RNF220-217ENST00000496262 GPR108Q9NPR9 543 aa13.33□□□□□ -0.28
RNF220-217ENST00000496262 PIH1D3Q9NQM4 214 aaKnown RBP13.33□□□□□ -0.28
RNF220-217ENST00000496262 SAP30BPQ9UHR5 308 aaKnown RBP13.33□□□□□ -0.28
RNF220-217ENST00000496262 DBNLQ9UJU6 430 aaKnown RBP13.33□□□□□ -0.28
RNF220-217ENST00000496262 SLC45A1Q9Y2W3 748 aa13.33□□□□□ -0.28
RNF220-217ENST00000496262 NDUFB9Q9Y6M9 179 aa13.33□□□□□ -0.28
RNF220-217ENST00000496262 MAST2Q6P0Q8 1798 aa13.32□□□□□ -0.28
RNF220-217ENST00000496262 COL2A1P02458 1487 aaPredicted RBP13.32□□□□□ -0.28
RNF220-217ENST00000496262 ADCY3O60266 1144 aa13.32□□□□□ -0.28
RNF220-217ENST00000496262 CAP2P40123 477 aa13.32□□□□□ -0.28
RNF220-217ENST00000496262 FLT3LGP49771 235 aa13.32□□□□□ -0.28
RNF220-217ENST00000496262 UBXN2AP68543 259 aa13.32□□□□□ -0.28
RNF220-217ENST00000496262 CRACR2BQ8N4Y2 399 aaPredicted RBP13.32□□□□□ -0.28
RNF220-217ENST00000496262 UNC93B1Q9H1C4 597 aa13.32□□□□□ -0.28
RNF220-217ENST00000496262 PNMA3Q9UL41 463 aa13.32□□□□□ -0.28
RNF220-217ENST00000496262 NOP58Q9Y2X3 529 aaKnown RBP13.32□□□□□ -0.28
RNF220-217ENST00000496262 FLT1P17948 1338 aa13.32□□□□□ -0.28
RNF220-217ENST00000496262 USP17L5A8MUK1 530 aa13.31□□□□□ -0.28
RNF220-217ENST00000496262 ZBTB7BO15156 539 aaPredicted RBP13.31□□□□□ -0.28
RNF220-217ENST00000496262 IDH1O75874 414 aaKnown RBP13.31□□□□□ -0.28
RNF220-217ENST00000496262 GDF11O95390 407 aa13.31□□□□□ -0.28
RNF220-217ENST00000496262 PLCG2P16885 1265 aa13.31□□□□□ -0.28
RNF220-217ENST00000496262 DYNLL1P63167 89 aaKnown RBP13.31□□□□□ -0.28
RNF220-217ENST00000496262 MTMR2Q13614 643 aa13.31□□□□□ -0.28
RNF220-217ENST00000496262 SHROOM1Q2M3G4 852 aaPredicted RBP13.31□□□□□ -0.28
RNF220-217ENST00000496262 MIGA1Q8NAN2 632 aa13.31□□□□□ -0.28
RNF220-217ENST00000496262 PROCA1Q8NCQ7 364 aaPredicted RBP13.31□□□□□ -0.28
RNF220-217ENST00000496262 SLAIN1Q8ND83 568 aa13.31□□□□□ -0.28
RNF220-217ENST00000496262 PANK1Q8TE04 598 aa13.31□□□□□ -0.28
RNF220-217ENST00000496262 EAF2Q96CJ1 260 aaPredicted RBP13.31□□□□□ -0.28
RNF220-217ENST00000496262 PI4KBQ9UBF8 816 aa13.31□□□□□ -0.28
RNF220-217ENST00000496262 HERC5Q9UII4 1024 aaKnown RBP13.31□□□□□ -0.28
RNF220-217ENST00000496262 PALD1Q9ULE6 856 aa13.31□□□□□ -0.28
RNF220-217ENST00000496262 EXOC6BQ9Y2D4 811 aa13.31□□□□□ -0.28
RNF220-217ENST00000496262 PHIPQ8WWQ0 1821 aa13.31□□□□□ -0.28
RNF220-217ENST00000496262 H0YGN5 161 aa13.3□□□□□ -0.28
RNF220-217ENST00000496262 INHAP05111 366 aa13.3□□□□□ -0.28
RNF220-217ENST00000496262 CYP7A1P22680 504 aa13.3□□□□□ -0.28
RNF220-217ENST00000496262 NKX2-3Q8TAU0 364 aa13.3□□□□□ -0.28
RNF220-217ENST00000496262 DPF3Q92784 378 aa13.3□□□□□ -0.28
RNF220-217ENST00000496262 COA7Q96BR5 231 aa13.3□□□□□ -0.28
RNF220-217ENST00000496262 CCDC136Q96JN2 1154 aa13.3□□□□□ -0.28
RNF220-217ENST00000496262 DHX36Q9H2U1 1008 aaKnown RBP13.3□□□□□ -0.28
RNF220-217ENST00000496262 DNAJC18Q9H819 358 aa13.3□□□□□ -0.28
RNF220-217ENST00000496262 AS3MTQ9HBK9 375 aa13.3□□□□□ -0.28
RNF220-217ENST00000496262 PTPRFP10586 1907 aa13.3□□□□□ -0.28
RNF220-217ENST00000496262 GJB1P08034 283 aa13.29□□□□□ -0.28
RNF220-217ENST00000496262 GJA8P48165 433 aa13.29□□□□□ -0.28
RNF220-217ENST00000496262 PPP4CP60510 307 aa13.29□□□□□ -0.28
RNF220-217ENST00000496262 JAG1P78504 1218 aa13.29□□□□□ -0.28
RNF220-217ENST00000496262 PABPC4Q13310 644 aaKnown RBP eCLIP13.29□□□□□ -0.28
RNF220-217ENST00000496262 FAM110CQ1W6H9 321 aa13.29□□□□□ -0.28
RNF220-217ENST00000496262 CEP85Q6P2H3 762 aa13.29□□□□□ -0.28
RNF220-217ENST00000496262 AACSQ86V21 672 aa13.29□□□□□ -0.28
RNF220-217ENST00000496262 MAGEB6Q8N7X4 407 aa13.29□□□□□ -0.28
RNF220-217ENST00000496262 U2AF1L4Q8WU68 220 aaKnown RBP13.29□□□□□ -0.28
RNF220-217ENST00000496262 ASCC2Q9H1I8 757 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms