RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 LAMB1P07942 1786 aa25.87■■□□□ 1.73
ECHDC3-205ENST00000496136 E7EWF7 191 aa25.87■■□□□ 1.73
ECHDC3-205ENST00000496136 ADCK5Q3MIX3 580 aa25.87■■□□□ 1.73
ECHDC3-205ENST00000496136 AKNAD1Q5T1N1 836 aa25.87■■□□□ 1.73
ECHDC3-205ENST00000496136 STOX1Q6ZVD7 989 aa25.87■■□□□ 1.73
ECHDC3-205ENST00000496136 CLEC11AQ9Y240 323 aa25.87■■□□□ 1.73
ECHDC3-205ENST00000496136 FOXP4Q8IVH2 680 aaPredicted RBP25.86■■□□□ 1.73
ECHDC3-205ENST00000496136 SULF1Q8IWU6 871 aa25.86■■□□□ 1.73
ECHDC3-205ENST00000496136 STAG1Q8WVM7 1258 aa25.86■■□□□ 1.73
ECHDC3-205ENST00000496136 IL17RAQ96F46 866 aa25.86■■□□□ 1.73
ECHDC3-205ENST00000496136 KIF2CQ99661 725 aa25.86■■□□□ 1.73
ECHDC3-205ENST00000496136 SERPINB13Q9UIV8 391 aa25.86■■□□□ 1.73
ECHDC3-205ENST00000496136 SLC3A2P08195 630 aaKnown RBP25.85■■□□□ 1.73
ECHDC3-205ENST00000496136 FGRP09769 529 aa25.85■■□□□ 1.73
ECHDC3-205ENST00000496136 GABPAQ06546 454 aa25.85■■□□□ 1.73
ECHDC3-205ENST00000496136 MFSD6Q6ZSS7 791 aa25.85■■□□□ 1.73
ECHDC3-205ENST00000496136 EHD4Q9H223 541 aa25.85■■□□□ 1.73
ECHDC3-205ENST00000496136 SLURP2P0DP57 97 aa25.84■■□□□ 1.73
ECHDC3-205ENST00000496136 PRAMEF18Q5VWM3 479 aa25.84■■□□□ 1.73
ECHDC3-205ENST00000496136 KRT26Q7Z3Y9 468 aa25.84■■□□□ 1.73
ECHDC3-205ENST00000496136 PPP2R3BQ9Y5P8 575 aa25.84■■□□□ 1.73
ECHDC3-205ENST00000496136 ROBO3Q96MS0 1386 aa25.84■■□□□ 1.73
ECHDC3-205ENST00000496136 KRT32Q14532 448 aa25.84■■□□□ 1.73
ECHDC3-205ENST00000496136 C16orf86Q6ZW13 317 aa25.84■■□□□ 1.73
ECHDC3-205ENST00000496136 METTL16Q86W50 562 aaKnown RBP25.84■■□□□ 1.73
ECHDC3-205ENST00000496136 RNF41Q9H4P4 317 aaPredicted RBP25.84■■□□□ 1.73
ECHDC3-205ENST00000496136 SIPA1L1O43166 1804 aa25.83■■□□□ 1.73
ECHDC3-205ENST00000496136 PDE4BQ07343 736 aa25.83■■□□□ 1.73
ECHDC3-205ENST00000496136 SLC44A5Q8NCS7 719 aa25.83■■□□□ 1.73
ECHDC3-205ENST00000496136 GPBP1L1Q9HC44 474 aaPredicted RBP25.83■■□□□ 1.73
ECHDC3-205ENST00000496136 CDK8P49336 464 aa25.82■■□□□ 1.72
ECHDC3-205ENST00000496136 NBPF12Q5TAG4 269 aaPredicted RBP25.82■■□□□ 1.72
ECHDC3-205ENST00000496136 DLK2Q6UY11 383 aa25.82■■□□□ 1.72
ECHDC3-205ENST00000496136 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.82■■□□□ 1.72
ECHDC3-205ENST00000496136 ADM5C9JUS6 153 aa25.82■■□□□ 1.72
ECHDC3-205ENST00000496136 PRDM1O75626 825 aa25.82■■□□□ 1.72
ECHDC3-205ENST00000496136 PCP11498 1178 aaKnown RBP25.82■■□□□ 1.72
ECHDC3-205ENST00000496136 COL9A3Q14050 684 aaPredicted RBP25.82■■□□□ 1.72
ECHDC3-205ENST00000496136 CDC37L1Q7L3B6 337 aa25.82■■□□□ 1.72
ECHDC3-205ENST00000496136 USP48Q86UV5 1035 aa25.82■■□□□ 1.72
ECHDC3-205ENST00000496136 LDHDQ86WU2 507 aa25.82■■□□□ 1.72
ECHDC3-205ENST00000496136 CRACR2BQ8N4Y2 399 aaPredicted RBP25.82■■□□□ 1.72
ECHDC3-205ENST00000496136 JAKMIP1Q96N16 626 aaKnown RBP25.82■■□□□ 1.72
ECHDC3-205ENST00000496136 NEK1Q96PY6 1258 aa25.82■■□□□ 1.72
ECHDC3-205ENST00000496136 DNAJC18Q9H819 358 aa25.82■■□□□ 1.72
ECHDC3-205ENST00000496136 NEDD4P46934 1319 aa25.81■■□□□ 1.72
ECHDC3-205ENST00000496136 MAP1SQ66K74 1059 aaPredicted RBP25.81■■□□□ 1.72
ECHDC3-205ENST00000496136 NKX2-3Q8TAU0 364 aa25.81■■□□□ 1.72
ECHDC3-205ENST00000496136 SWAP70Q9UH65 585 aa25.81■■□□□ 1.72
ECHDC3-205ENST00000496136 FAM196BA6NMK8 535 aa25.8■■□□□ 1.72
ECHDC3-205ENST00000496136 ORC4O43929 436 aa25.8■■□□□ 1.72
ECHDC3-205ENST00000496136 MAP3K10Q02779 954 aa25.8■■□□□ 1.72
ECHDC3-205ENST00000496136 TRDNQ13061 729 aa25.8■■□□□ 1.72
ECHDC3-205ENST00000496136 MIGA2Q7L4E1 593 aa25.8■■□□□ 1.72
ECHDC3-205ENST00000496136 NCOA7Q8NI08 942 aa25.8■■□□□ 1.72
ECHDC3-205ENST00000496136 TM6SF1Q9BZW5 370 aa25.8■■□□□ 1.72
ECHDC3-205ENST00000496136 CNNM2Q9H8M5 875 aa25.8■■□□□ 1.72
ECHDC3-205ENST00000496136 MKNK2Q9HBH9 465 aa25.8■■□□□ 1.72
ECHDC3-205ENST00000496136 ZNF287Q9HBT7 754 aa25.8■■□□□ 1.72
ECHDC3-205ENST00000496136 TOMM22Q9NS69 142 aa25.8■■□□□ 1.72
ECHDC3-205ENST00000496136 HERC5Q9UII4 1024 aaKnown RBP25.8■■□□□ 1.72
ECHDC3-205ENST00000496136 TAOK2Q9UL54 1235 aa25.8■■□□□ 1.72
ECHDC3-205ENST00000496136 TBC1D12O60347 775 aa25.79■■□□□ 1.72
ECHDC3-205ENST00000496136 PSMA5P28066 241 aa25.79■■□□□ 1.72
ECHDC3-205ENST00000496136 GLIS2Q9BZE0 524 aaPredicted RBP25.79■■□□□ 1.72
ECHDC3-205ENST00000496136 B4E1Z4 1266 aa25.79■■□□□ 1.72
ECHDC3-205ENST00000496136 SHMT1P34896 483 aa25.79■■□□□ 1.72
ECHDC3-205ENST00000496136 RRP12Q5JTH9 1297 aaKnown RBP25.79■■□□□ 1.72
ECHDC3-205ENST00000496136 KRT23Q9C075 422 aa25.79■■□□□ 1.72
ECHDC3-205ENST00000496136 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.79■■□□□ 1.72
ECHDC3-205ENST00000496136 CASTP20810 708 aaKnown RBP25.78■■□□□ 1.72
ECHDC3-205ENST00000496136 TRIM34Q9BYJ4 488 aa25.78■■□□□ 1.72
ECHDC3-205ENST00000496136 ZSWIM6Q9HCJ5 1215 aa25.78■■□□□ 1.72
ECHDC3-205ENST00000496136 RASA1P20936 1047 aa25.77■■□□□ 1.72
ECHDC3-205ENST00000496136 SUPT20HL1Q3ZLR7 823 aa25.77■■□□□ 1.72
ECHDC3-205ENST00000496136 TATDN1Q6P1N9 297 aa25.77■■□□□ 1.72
ECHDC3-205ENST00000496136 RALYLQ86SE5 291 aaKnown RBP25.77■■□□□ 1.72
ECHDC3-205ENST00000496136 ZSWIM5Q9P217 1185 aa25.77■■□□□ 1.72
ECHDC3-205ENST00000496136 KDM4AO75164 1064 aa25.77■■□□□ 1.72
ECHDC3-205ENST00000496136 CPA1P15085 419 aa25.77■■□□□ 1.72
ECHDC3-205ENST00000496136 MB21D2Q8IYB1 491 aaPredicted RBP25.77■■□□□ 1.72
ECHDC3-205ENST00000496136 ZNF444Q8N0Y2 327 aaPredicted RBP25.77■■□□□ 1.72
ECHDC3-205ENST00000496136 HOOK2Q96ED9 719 aa25.77■■□□□ 1.72
ECHDC3-205ENST00000496136 UPF3BQ9BZI7 483 aaKnown RBP25.77■■□□□ 1.72
ECHDC3-205ENST00000496136 RANBP6O60518 1105 aaKnown RBP25.76■■□□□ 1.71
ECHDC3-205ENST00000496136 HMGB1P09429 215 aaKnown RBP25.76■■□□□ 1.71
ECHDC3-205ENST00000496136 BLOC1S2Q6QNY1 142 aa25.76■■□□□ 1.71
ECHDC3-205ENST00000496136 ESR2Q92731 530 aa25.76■■□□□ 1.71
ECHDC3-205ENST00000496136 MYH8P13535 1937 aa25.75■■□□□ 1.71
ECHDC3-205ENST00000496136 RUFY3Q7L099 469 aa25.75■■□□□ 1.71
ECHDC3-205ENST00000496136 FAM47AQ5JRC9 791 aa25.74■■□□□ 1.71
ECHDC3-205ENST00000496136 CYB5R4Q7L1T6 521 aa25.74■■□□□ 1.71
ECHDC3-205ENST00000496136 DHX32Q7L7V1 743 aaKnown RBP25.74■■□□□ 1.71
ECHDC3-205ENST00000496136 CDCA5Q96FF9 252 aa25.74■■□□□ 1.71
ECHDC3-205ENST00000496136 TSHZ2Q9NRE2 1034 aa25.74■■□□□ 1.71
ECHDC3-205ENST00000496136 CYP46A1Q9Y6A2 500 aa25.74■■□□□ 1.71
ECHDC3-205ENST00000496136 KIF3CO14782 793 aa25.74■■□□□ 1.71
ECHDC3-205ENST00000496136 EXOSC10Q01780 885 aaKnown RBP25.74■■□□□ 1.71
ECHDC3-205ENST00000496136 CERKLQ49MI3 558 aaPredicted RBP25.74■■□□□ 1.71
ECHDC3-205ENST00000496136 CHST3Q7LGC8 479 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms