RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 SERPINB13Q9UIV8 391 aa23.15■■□□□ 1.3
ATG3-208ENST00000495756 ROBO3Q96MS0 1386 aa23.15■■□□□ 1.3
ATG3-208ENST00000495756 CTDSPL2Q05D32 466 aa23.14■■□□□ 1.29
ATG3-208ENST00000495756 NBPF12Q5TAG4 269 aaPredicted RBP23.14■■□□□ 1.29
ATG3-208ENST00000495756 DLK2Q6UY11 383 aa23.14■■□□□ 1.29
ATG3-208ENST00000495756 TBC1D10CQ8IV04 446 aa23.14■■□□□ 1.29
ATG3-208ENST00000495756 KCNB2Q92953 911 aa23.14■■□□□ 1.29
ATG3-208ENST00000495756 TAF6LQ9Y6J9 622 aa23.14■■□□□ 1.29
ATG3-208ENST00000495756 SLC3A2P08195 630 aaKnown RBP23.13■■□□□ 1.29
ATG3-208ENST00000495756 METTL16Q86W50 562 aaKnown RBP23.13■■□□□ 1.29
ATG3-208ENST00000495756 FOXP4Q8IVH2 680 aaPredicted RBP23.13■■□□□ 1.29
ATG3-208ENST00000495756 ZNF784Q8NCA9 323 aaPredicted RBP23.13■■□□□ 1.29
ATG3-208ENST00000495756 DYNLL2Q96FJ2 89 aa23.13■■□□□ 1.29
ATG3-208ENST00000495756 C22orf23Q9BZE7 217 aa23.13■■□□□ 1.29
ATG3-208ENST00000495756 ZKSCAN1P17029 563 aaPredicted RBP23.12■■□□□ 1.29
ATG3-208ENST00000495756 GABPAQ06546 454 aa23.12■■□□□ 1.29
ATG3-208ENST00000495756 CHADLQ6NUI6 762 aa23.12■■□□□ 1.29
ATG3-208ENST00000495756 RASEFQ8IZ41 740 aa23.12■■□□□ 1.29
ATG3-208ENST00000495756 STK11IPQ8N1F8 1099 aa23.12■■□□□ 1.29
ATG3-208ENST00000495756 TSGA10IPQ3SY00 556 aa23.11■■□□□ 1.29
ATG3-208ENST00000495756 SUPT20HL1Q3ZLR7 823 aa23.11■■□□□ 1.29
ATG3-208ENST00000495756 AKNAD1Q5T1N1 836 aa23.11■■□□□ 1.29
ATG3-208ENST00000495756 C16orf86Q6ZW13 317 aa23.11■■□□□ 1.29
ATG3-208ENST00000495756 CRACR2BQ8N4Y2 399 aaPredicted RBP23.11■■□□□ 1.29
ATG3-208ENST00000495756 STAG1Q8WVM7 1258 aa23.11■■□□□ 1.29
ATG3-208ENST00000495756 HOOK2Q96ED9 719 aa23.11■■□□□ 1.29
ATG3-208ENST00000495756 CDCA5Q96FF9 252 aa23.11■■□□□ 1.29
ATG3-208ENST00000495756 HERC5Q9UII4 1024 aaKnown RBP23.11■■□□□ 1.29
ATG3-208ENST00000495756 TAOK2Q9UL54 1235 aa23.11■■□□□ 1.29
ATG3-208ENST00000495756 SLURP2P0DP57 97 aa23.11■■□□□ 1.29
ATG3-208ENST00000495756 SLC44A5Q8NCS7 719 aa23.11■■□□□ 1.29
ATG3-208ENST00000495756 TRIM34Q9BYJ4 488 aa23.11■■□□□ 1.29
ATG3-208ENST00000495756 DNAJC18Q9H819 358 aa23.11■■□□□ 1.29
ATG3-208ENST00000495756 INCENPQ9NQS7 918 aa23.11■■□□□ 1.29
ATG3-208ENST00000495756 SNX14Q9Y5W7 946 aa23.11■■□□□ 1.29
ATG3-208ENST00000495756 TACC3Q9Y6A5 838 aa23.11■■□□□ 1.29
ATG3-208ENST00000495756 E7EWF7 191 aa23.1■■□□□ 1.29
ATG3-208ENST00000495756 TBC1D12O60347 775 aa23.1■■□□□ 1.29
ATG3-208ENST00000495756 FGRP09769 529 aa23.1■■□□□ 1.29
ATG3-208ENST00000495756 PCP11498 1178 aaKnown RBP23.1■■□□□ 1.29
ATG3-208ENST00000495756 CDK8P49336 464 aa23.1■■□□□ 1.29
ATG3-208ENST00000495756 RBM25P49756 843 aaKnown RBP23.1■■□□□ 1.29
ATG3-208ENST00000495756 MAP3K10Q02779 954 aa23.1■■□□□ 1.29
ATG3-208ENST00000495756 PDE4BQ07343 736 aa23.1■■□□□ 1.29
ATG3-208ENST00000495756 MFSD6Q6ZSS7 791 aa23.1■■□□□ 1.29
ATG3-208ENST00000495756 STOX1Q6ZVD7 989 aa23.1■■□□□ 1.29
ATG3-208ENST00000495756 MIGA2Q7L4E1 593 aa23.1■■□□□ 1.29
ATG3-208ENST00000495756 RNF41Q9H4P4 317 aaPredicted RBP23.1■■□□□ 1.29
ATG3-208ENST00000495756 SWAP70Q9UH65 585 aa23.1■■□□□ 1.29
ATG3-208ENST00000495756 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.1■■□□□ 1.29
ATG3-208ENST00000495756 SSC5DA1L4H1 1573 aa23.09■■□□□ 1.29
ATG3-208ENST00000495756 FAM196BA6NMK8 535 aa23.09■■□□□ 1.29
ATG3-208ENST00000495756 ANAPC15P60006 121 aa23.09■■□□□ 1.29
ATG3-208ENST00000495756 ZNF287Q9HBT7 754 aa23.09■■□□□ 1.29
ATG3-208ENST00000495756 TRAF5O00463 557 aa23.08■■□□□ 1.29
ATG3-208ENST00000495756 SHMT1P34896 483 aa23.08■■□□□ 1.29
ATG3-208ENST00000495756 DCAF15Q66K64 600 aa23.08■■□□□ 1.29
ATG3-208ENST00000495756 TBC1D32Q96NH3 1257 aa23.08■■□□□ 1.29
ATG3-208ENST00000495756 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.08■■□□□ 1.29
ATG3-208ENST00000495756 NEDD4P46934 1319 aa23.07■■□□□ 1.28
ATG3-208ENST00000495756 ORC4O43929 436 aa23.07■■□□□ 1.28
ATG3-208ENST00000495756 PRDM1O75626 825 aa23.07■■□□□ 1.28
ATG3-208ENST00000495756 KRT32Q14532 448 aa23.07■■□□□ 1.28
ATG3-208ENST00000495756 MKNK2Q9HBH9 465 aa23.07■■□□□ 1.28
ATG3-208ENST00000495756 ITGBL1O95965 494 aaPredicted RBP23.06■■□□□ 1.28
ATG3-208ENST00000495756 ADCK5Q3MIX3 580 aa23.06■■□□□ 1.28
ATG3-208ENST00000495756 TATDN1Q6P1N9 297 aa23.06■■□□□ 1.28
ATG3-208ENST00000495756 IL17RAQ96F46 866 aa23.06■■□□□ 1.28
ATG3-208ENST00000495756 CNNM2Q9H8M5 875 aa23.06■■□□□ 1.28
ATG3-208ENST00000495756 MYH8P13535 1937 aa23.06■■□□□ 1.28
ATG3-208ENST00000495756 TOMM70O94826 608 aa23.05■■□□□ 1.28
ATG3-208ENST00000495756 RASA1P20936 1047 aa23.05■■□□□ 1.28
ATG3-208ENST00000495756 NF2P35240 595 aa23.05■■□□□ 1.28
ATG3-208ENST00000495756 TRDNQ13061 729 aa23.05■■□□□ 1.28
ATG3-208ENST00000495756 TOMM22Q9NS69 142 aa23.05■■□□□ 1.28
ATG3-208ENST00000495756 FMR1Q06787 632 aaKnown RBP eCLIP23.05■■□□□ 1.28
ATG3-208ENST00000495756 RRP12Q5JTH9 1297 aaKnown RBP23.05■■□□□ 1.28
ATG3-208ENST00000495756 SMC1BQ8NDV3 1235 aa23.05■■□□□ 1.28
ATG3-208ENST00000495756 NCOA7Q8NI08 942 aa23.05■■□□□ 1.28
ATG3-208ENST00000495756 ZNF341Q9BYN7 854 aa23.05■■□□□ 1.28
ATG3-208ENST00000495756 KRT23Q9C075 422 aa23.05■■□□□ 1.28
ATG3-208ENST00000495756 RALYLQ86SE5 291 aaKnown RBP23.04■■□□□ 1.28
ATG3-208ENST00000495756 ZNF444Q8N0Y2 327 aaPredicted RBP23.04■■□□□ 1.28
ATG3-208ENST00000495756 RBM46Q8TBY0 533 aaKnown RBP23.04■■□□□ 1.28
ATG3-208ENST00000495756 JAKMIP1Q96N16 626 aaKnown RBP23.04■■□□□ 1.28
ATG3-208ENST00000495756 PHF20L1A8MW92 1017 aa23.03■■□□□ 1.28
ATG3-208ENST00000495756 B4E1Z4 1266 aa23.03■■□□□ 1.28
ATG3-208ENST00000495756 RANBP6O60518 1105 aaKnown RBP23.03■■□□□ 1.28
ATG3-208ENST00000495756 NT5C2P49902 561 aa23.03■■□□□ 1.28
ATG3-208ENST00000495756 CERKLQ49MI3 558 aaPredicted RBP23.03■■□□□ 1.28
ATG3-208ENST00000495756 NKX2-3Q8TAU0 364 aa23.03■■□□□ 1.28
ATG3-208ENST00000495756 ESR2Q92731 530 aa23.03■■□□□ 1.28
ATG3-208ENST00000495756 NEK1Q96PY6 1258 aa23.03■■□□□ 1.28
ATG3-208ENST00000495756 FZD1Q9UP38 647 aa23.03■■□□□ 1.28
ATG3-208ENST00000495756 PPP1R12BO60237 982 aaPredicted RBP23.02■■□□□ 1.28
ATG3-208ENST00000495756 KDM4AO75164 1064 aa23.02■■□□□ 1.28
ATG3-208ENST00000495756 PRKG1Q13976 671 aa23.02■■□□□ 1.28
ATG3-208ENST00000495756 RRP1BQ14684 758 aaKnown RBP23.02■■□□□ 1.28
ATG3-208ENST00000495756 CCDC17Q96LX7 622 aa23.02■■□□□ 1.28
ATG3-208ENST00000495756 KIF2CQ99661 725 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms