RNA–Protein interactions for RNA: ENST00000495553.1

ACTN4-207, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-207ENST00000495553 MAPKAPK5Q8IW41 473 aa11.27□□□□□ -0.61
ACTN4-207ENST00000495553 IFNL3Q8IZI9 196 aa11.27□□□□□ -0.61
ACTN4-207ENST00000495553 IL27Q8NEV9 243 aa11.27□□□□□ -0.61
ACTN4-207ENST00000495553 CCDC102AQ96A19 550 aa11.27□□□□□ -0.61
ACTN4-207ENST00000495553 CAPNS2Q96L46 248 aa11.27□□□□□ -0.61
ACTN4-207ENST00000495553 OSBPL5Q9H0X9 879 aaPredicted RBP11.27□□□□□ -0.61
ACTN4-207ENST00000495553 ZNF287Q9HBT7 754 aa11.27□□□□□ -0.61
ACTN4-207ENST00000495553 FZD1Q9UP38 647 aa11.27□□□□□ -0.61
ACTN4-207ENST00000495553 PCNTO95613 3336 aa11.27□□□□□ -0.61
ACTN4-207ENST00000495553 USP2O75604 605 aaPredicted RBP11.26□□□□□ -0.61
ACTN4-207ENST00000495553 SEC24BO95487 1268 aa11.26□□□□□ -0.61
ACTN4-207ENST00000495553 FGAP02671 866 aa11.26□□□□□ -0.61
ACTN4-207ENST00000495553 POLR3DP05423 398 aaPredicted RBP11.26□□□□□ -0.61
ACTN4-207ENST00000495553 HLA-DOAP06340 250 aa11.26□□□□□ -0.61
ACTN4-207ENST00000495553 ANAPC15P60006 121 aa11.26□□□□□ -0.61
ACTN4-207ENST00000495553 PTH1RQ03431 593 aa11.26□□□□□ -0.61
ACTN4-207ENST00000495553 TRDNQ13061 729 aa11.26□□□□□ -0.61
ACTN4-207ENST00000495553 MAP3K11Q16584 847 aa11.26□□□□□ -0.61
ACTN4-207ENST00000495553 SLC10A4Q96EP9 437 aa11.26□□□□□ -0.61
ACTN4-207ENST00000495553 TRIM34Q9BYJ4 488 aa11.26□□□□□ -0.61
ACTN4-207ENST00000495553 ZNF341Q9BYN7 854 aa11.26□□□□□ -0.61
ACTN4-207ENST00000495553 DHX36Q9H2U1 1008 aaKnown RBP11.26□□□□□ -0.61
ACTN4-207ENST00000495553 RNF41Q9H4P4 317 aaPredicted RBP11.26□□□□□ -0.61
ACTN4-207ENST00000495553 MCM9Q9NXL9 1143 aa11.26□□□□□ -0.61
ACTN4-207ENST00000495553 CSADQ9Y600 493 aa11.26□□□□□ -0.61
ACTN4-207ENST00000495553 WDR33Q9C0J8 1336 aaKnown RBP11.26□□□□□ -0.61
ACTN4-207ENST00000495553 DDTLA6NHG4 134 aaPredicted RBP11.25□□□□□ -0.61
ACTN4-207ENST00000495553 UNCXA6NJT0 531 aa11.25□□□□□ -0.61
ACTN4-207ENST00000495553 GSG1L2A8MUP6 293 aa11.25□□□□□ -0.61
ACTN4-207ENST00000495553 PCP11498 1178 aaKnown RBP11.25□□□□□ -0.61
ACTN4-207ENST00000495553 PSMA5P28066 241 aa11.25□□□□□ -0.61
ACTN4-207ENST00000495553 HSPA4P34932 840 aa11.25□□□□□ -0.61
ACTN4-207ENST00000495553 RBM25P49756 843 aaKnown RBP11.25□□□□□ -0.61
ACTN4-207ENST00000495553 NT5C2P49902 561 aa11.25□□□□□ -0.61
ACTN4-207ENST00000495553 MAP3K9P80192 1104 aa11.25□□□□□ -0.61
ACTN4-207ENST00000495553 LDLRAD1Q5T700 205 aa11.25□□□□□ -0.61
ACTN4-207ENST00000495553 VPS53Q5VIR6 699 aa11.25□□□□□ -0.61
ACTN4-207ENST00000495553 CREB3L3Q68CJ9 461 aa11.25□□□□□ -0.61
ACTN4-207ENST00000495553 SH3BP5LQ7L8J4 393 aa11.25□□□□□ -0.61
ACTN4-207ENST00000495553 TTC6Q86TZ1 520 aa11.25□□□□□ -0.61
ACTN4-207ENST00000495553 ANKRD13AQ8IZ07 590 aa11.25□□□□□ -0.61
ACTN4-207ENST00000495553 SDR42E1Q8WUS8 393 aa11.25□□□□□ -0.61
ACTN4-207ENST00000495553 TBC1D32Q96NH3 1257 aa11.25□□□□□ -0.61
ACTN4-207ENST00000495553 WRNIP1Q96S55 665 aa11.25□□□□□ -0.61
ACTN4-207ENST00000495553 IL25Q9H293 177 aa11.25□□□□□ -0.61
ACTN4-207ENST00000495553 CNNM2Q9H8M5 875 aa11.25□□□□□ -0.61
ACTN4-207ENST00000495553 DCP1AQ9NPI6 582 aaPredicted RBP11.25□□□□□ -0.61
ACTN4-207ENST00000495553 SAP30BPQ9UHR5 308 aaKnown RBP11.25□□□□□ -0.61
ACTN4-207ENST00000495553 TAOK2Q9UL54 1235 aa11.25□□□□□ -0.61
ACTN4-207ENST00000495553 FLT1P17948 1338 aa11.25□□□□□ -0.61
ACTN4-207ENST00000495553 MINDY4BA8MYZ0 360 aa11.24□□□□□ -0.61
ACTN4-207ENST00000495553 PRKAB2O43741 272 aa11.24□□□□□ -0.61
ACTN4-207ENST00000495553 HMGB1P09429 215 aaKnown RBP11.24□□□□□ -0.61
ACTN4-207ENST00000495553 PDE4BQ07343 736 aa11.24□□□□□ -0.61
ACTN4-207ENST00000495553 NOGQ13253 232 aa11.24□□□□□ -0.61
ACTN4-207ENST00000495553 SBK1Q52WX2 424 aa11.24□□□□□ -0.61
ACTN4-207ENST00000495553 RALYLQ86SE5 291 aaKnown RBP11.24□□□□□ -0.61
ACTN4-207ENST00000495553 CRACR2BQ8N4Y2 399 aaPredicted RBP11.24□□□□□ -0.61
ACTN4-207ENST00000495553 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.24□□□□□ -0.61
ACTN4-207ENST00000495553 PI4KBQ9UBF8 816 aa11.24□□□□□ -0.61
ACTN4-207ENST00000495553 SSC5DA1L4H1 1573 aa11.24□□□□□ -0.61
ACTN4-207ENST00000495553 USP17L12C9JPN9 530 aa11.23□□□□□ -0.61
ACTN4-207ENST00000495553 USP17L21D6R901 530 aa11.23□□□□□ -0.61
ACTN4-207ENST00000495553 SLC27A2O14975 620 aa11.23□□□□□ -0.61
ACTN4-207ENST00000495553 AOC2O75106 756 aa11.23□□□□□ -0.61
ACTN4-207ENST00000495553 SLC10A3P09131 477 aa11.23□□□□□ -0.61
ACTN4-207ENST00000495553 MAP2K2P36507 400 aa11.23□□□□□ -0.61
ACTN4-207ENST00000495553 NECTIN1Q15223 517 aa11.23□□□□□ -0.61
ACTN4-207ENST00000495553 MFSD6Q6ZSS7 791 aa11.23□□□□□ -0.61
ACTN4-207ENST00000495553 RASAL3Q86YV0 1011 aa11.23□□□□□ -0.61
ACTN4-207ENST00000495553 CLMNQ96JQ2 1002 aa11.23□□□□□ -0.61
ACTN4-207ENST00000495553 ELP3Q9H9T3 547 aa11.23□□□□□ -0.61
ACTN4-207ENST00000495553 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.23□□□□□ -0.613e-9■■■■■ 31.9
ACTN4-207ENST00000495553 PALD1Q9ULE6 856 aa11.23□□□□□ -0.61
ACTN4-207ENST00000495553 ATRNL1Q5VV63 1379 aa11.23□□□□□ -0.61
ACTN4-207ENST00000495553 PAPPA2Q9BXP8 1791 aa11.23□□□□□ -0.61
ACTN4-207ENST00000495553 TBC1D12O60347 775 aa11.22□□□□□ -0.61
ACTN4-207ENST00000495553 POLR2AP24928 1970 aaKnown RBP11.22□□□□□ -0.61
ACTN4-207ENST00000495553 PPARAQ07869 468 aa11.22□□□□□ -0.61
ACTN4-207ENST00000495553 MKRN3Q13064 507 aaKnown RBP11.22□□□□□ -0.61
ACTN4-207ENST00000495553 VGLL4Q14135 290 aa11.22□□□□□ -0.61
ACTN4-207ENST00000495553 SLC4A8Q2Y0W8 1093 aa11.22□□□□□ -0.61
ACTN4-207ENST00000495553 CTR9Q6PD62 1173 aa11.22□□□□□ -0.61
ACTN4-207ENST00000495553 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.22□□□□□ -0.61
ACTN4-207ENST00000495553 FOXP4Q8IVH2 680 aaPredicted RBP11.22□□□□□ -0.61
ACTN4-207ENST00000495553 JMYQ8N9B5 988 aa11.22□□□□□ -0.61
ACTN4-207ENST00000495553 ZKSCAN4Q969J2 545 aaPredicted RBP11.22□□□□□ -0.61
ACTN4-207ENST00000495553 KRT23Q9C075 422 aa11.22□□□□□ -0.61
ACTN4-207ENST00000495553 MKNK2Q9HBH9 465 aa11.22□□□□□ -0.61
ACTN4-207ENST00000495553 EPB41L4AQ9HCS5 686 aaPredicted RBP11.22□□□□□ -0.61
ACTN4-207ENST00000495553 TOMM22Q9NS69 142 aa11.22□□□□□ -0.61
ACTN4-207ENST00000495553 HERC5Q9UII4 1024 aaKnown RBP11.22□□□□□ -0.61
ACTN4-207ENST00000495553 ANAPC4Q9UJX5 808 aa11.22□□□□□ -0.61
ACTN4-207ENST00000495553 COL2A1P02458 1487 aaPredicted RBP11.21□□□□□ -0.61
ACTN4-207ENST00000495553 FAM196BA6NMK8 535 aa11.21□□□□□ -0.61
ACTN4-207ENST00000495553 FAM155AB1AL88 458 aaPredicted RBP11.21□□□□□ -0.61
ACTN4-207ENST00000495553 ST18O60284 1047 aa11.21□□□□□ -0.61
ACTN4-207ENST00000495553 CYP21A2P08686 494 aa11.21□□□□□ -0.61
ACTN4-207ENST00000495553 INPP5BP32019 993 aa11.21□□□□□ -0.61
ACTN4-207ENST00000495553 ANP32AP39687 249 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 424.4 ms