RNA–Protein interactions for RNA: ENST00000495400.1

PTPN18-216, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-216ENST00000495400 GJB1P08034 283 aa18.12■□□□□ 0.49
PTPN18-216ENST00000495400 GJA8P48165 433 aa18.12■□□□□ 0.49
PTPN18-216ENST00000495400 OS9Q13438 667 aaPredicted RBP18.12■□□□□ 0.49
PTPN18-216ENST00000495400 TNNI3KQ59H18 835 aa18.12■□□□□ 0.49
PTPN18-216ENST00000495400 CCDC158Q5M9N0 1113 aa18.12■□□□□ 0.49
PTPN18-216ENST00000495400 TTC39AQ5SRH9 613 aa18.12■□□□□ 0.49
PTPN18-216ENST00000495400 PROCA1Q8NCQ7 364 aaPredicted RBP18.12■□□□□ 0.49
PTPN18-216ENST00000495400 SSH3Q8TE77 659 aa18.12■□□□□ 0.49
PTPN18-216ENST00000495400 SH3RF3Q8TEJ3 882 aaPredicted RBP18.12■□□□□ 0.49
PTPN18-216ENST00000495400 TBC1D2Q9BYX2 928 aa18.12■□□□□ 0.49
PTPN18-216ENST00000495400 RNF208Q9H0X6 261 aa18.12■□□□□ 0.49
PTPN18-216ENST00000495400 SNRKQ9NRH2 765 aa18.12■□□□□ 0.49
PTPN18-216ENST00000495400 PNMA3Q9UL41 463 aa18.12■□□□□ 0.49
PTPN18-216ENST00000495400 FPGT-TNNI3KV9GXZ4 949 aa18.12■□□□□ 0.49
PTPN18-216ENST00000495400 MYO5AQ9Y4I1 1855 aaKnown RBP18.12■□□□□ 0.49
PTPN18-216ENST00000495400 ADCY3O60266 1144 aa18.11■□□□□ 0.49
PTPN18-216ENST00000495400 BAG3O95817 575 aa18.11■□□□□ 0.49
PTPN18-216ENST00000495400 CAP2P40123 477 aa18.11■□□□□ 0.49
PTPN18-216ENST00000495400 SPP2Q13103 211 aa18.11■□□□□ 0.49
PTPN18-216ENST00000495400 TREML2Q5T2D2 321 aa18.11■□□□□ 0.49
PTPN18-216ENST00000495400 NAA16Q6N069 864 aaPredicted RBP18.11■□□□□ 0.49
PTPN18-216ENST00000495400 ZNF280CQ8ND82 737 aa18.11■□□□□ 0.49
PTPN18-216ENST00000495400 DBNDD2Q9BQY9 259 aa18.11■□□□□ 0.49
PTPN18-216ENST00000495400 HERC5Q9UII4 1024 aaKnown RBP18.11■□□□□ 0.49
PTPN18-216ENST00000495400 LOC285556D6RIA3 1793 aa18.11■□□□□ 0.49
PTPN18-216ENST00000495400 MAST2Q6P0Q8 1798 aa18.11■□□□□ 0.49
PTPN18-216ENST00000495400 CDK5RAP2Q96SN8 1893 aa18.11■□□□□ 0.49
PTPN18-216ENST00000495400 CEP290O15078 2479 aa18.1■□□□□ 0.49
PTPN18-216ENST00000495400 USP17L5A8MUK1 530 aa18.1■□□□□ 0.49
PTPN18-216ENST00000495400 TNPO2O14787 897 aaKnown RBP18.1■□□□□ 0.49
PTPN18-216ENST00000495400 SURF6O75683 361 aaKnown RBP18.1■□□□□ 0.49
PTPN18-216ENST00000495400 PLCG2P16885 1265 aa18.1■□□□□ 0.49
PTPN18-216ENST00000495400 FLT3LGP49771 235 aa18.1■□□□□ 0.49
PTPN18-216ENST00000495400 ANKRD13CQ8N6S4 541 aa18.1■□□□□ 0.49
PTPN18-216ENST00000495400 DHX36Q9H2U1 1008 aaKnown RBP18.1■□□□□ 0.49
PTPN18-216ENST00000495400 AATFQ9NY61 560 aaKnown RBP eCLIP18.1■□□□□ 0.49
PTPN18-216ENST00000495400 PI4KBQ9UBF8 816 aa18.1■□□□□ 0.49
PTPN18-216ENST00000495400 FOCADQ5VW36 1801 aa18.09■□□□□ 0.49
PTPN18-216ENST00000495400 HMGCS2P54868 508 aa18.09■□□□□ 0.49
PTPN18-216ENST00000495400 PPP4CP60510 307 aa18.09■□□□□ 0.49
PTPN18-216ENST00000495400 PABPC4Q13310 644 aaKnown RBP eCLIP18.09■□□□□ 0.49
PTPN18-216ENST00000495400 IRF5Q13568 498 aa18.09■□□□□ 0.49
PTPN18-216ENST00000495400 RRP1BQ14684 758 aaKnown RBP18.09■□□□□ 0.49
PTPN18-216ENST00000495400 FAM110CQ1W6H9 321 aa18.09■□□□□ 0.49
PTPN18-216ENST00000495400 PXYLP1Q8TE99 480 aa18.09■□□□□ 0.49
PTPN18-216ENST00000495400 UNC93B1Q9H1C4 597 aa18.09■□□□□ 0.49
PTPN18-216ENST00000495400 AS3MTQ9HBK9 375 aa18.09■□□□□ 0.49
PTPN18-216ENST00000495400 COLQQ9Y215 455 aaPredicted RBP18.09■□□□□ 0.49
PTPN18-216ENST00000495400 SIPA1L1O43166 1804 aa18.09■□□□□ 0.49
PTPN18-216ENST00000495400 H0YGN5 161 aa18.08■□□□□ 0.48
PTPN18-216ENST00000495400 IGSF3O75054 1194 aa18.08■□□□□ 0.48
PTPN18-216ENST00000495400 CYP2E1P05181 493 aaPredicted RBP18.08■□□□□ 0.48
PTPN18-216ENST00000495400 SH3D19Q5HYK7 790 aa18.08■□□□□ 0.48
PTPN18-216ENST00000495400 FTSJ3Q8IY81 847 aaKnown RBP18.08■□□□□ 0.48
PTPN18-216ENST00000495400 DPF3Q92784 378 aa18.08■□□□□ 0.48
PTPN18-216ENST00000495400 COA7Q96BR5 231 aa18.08■□□□□ 0.48
PTPN18-216ENST00000495400 ZNF512BQ96KM6 892 aaPredicted RBP18.08■□□□□ 0.48
PTPN18-216ENST00000495400 NOP58Q9Y2X3 529 aaKnown RBP18.08■□□□□ 0.48
PTPN18-216ENST00000495400 ELNP15502 786 aa18.07■□□□□ 0.48
PTPN18-216ENST00000495400 ZAP70P43403 619 aa18.07■□□□□ 0.48
PTPN18-216ENST00000495400 GCLCP48506 637 aaPredicted RBP18.07■□□□□ 0.48
PTPN18-216ENST00000495400 UBE2Q1Q7Z7E8 422 aa18.07■□□□□ 0.48
PTPN18-216ENST00000495400 MAPKAPK5Q8IW41 473 aa18.07■□□□□ 0.48
PTPN18-216ENST00000495400 U2AF1L4Q8WU68 220 aaKnown RBP18.07■□□□□ 0.48
PTPN18-216ENST00000495400 TGFBRAP1Q8WUH2 860 aa18.07■□□□□ 0.48
PTPN18-216ENST00000495400 HTATIP2Q9BUP3 242 aa18.07■□□□□ 0.48
PTPN18-216ENST00000495400 C1orf115Q9H7X2 142 aa18.07■□□□□ 0.48
PTPN18-216ENST00000495400 ZBTB7BO15156 539 aaPredicted RBP18.06■□□□□ 0.48
PTPN18-216ENST00000495400 SGPL1O95470 568 aa18.06■□□□□ 0.48
PTPN18-216ENST00000495400 INHAP05111 366 aa18.06■□□□□ 0.48
PTPN18-216ENST00000495400 HNRNPUQ00839 825 aaKnown RBP eCLIP18.06■□□□□ 0.48
PTPN18-216ENST00000495400 ADGRA1Q86SQ6 560 aa18.06■□□□□ 0.48
PTPN18-216ENST00000495400 FOXP4Q8IVH2 680 aaPredicted RBP18.06■□□□□ 0.48
PTPN18-216ENST00000495400 ITPRIPQ8IWB1 547 aa18.06■□□□□ 0.48
PTPN18-216ENST00000495400 WDR18Q9BV38 432 aa18.06■□□□□ 0.48
PTPN18-216ENST00000495400 FLT1P17948 1338 aa18.05■□□□□ 0.48
PTPN18-216ENST00000495400 ASNSP08243 561 aa18.05■□□□□ 0.48
PTPN18-216ENST00000495400 CAPN2P17655 700 aa18.05■□□□□ 0.48
PTPN18-216ENST00000495400 FXR1P51114 621 aaKnown RBP eCLIP18.05■□□□□ 0.48
PTPN18-216ENST00000495400 METTL16Q86W50 562 aaKnown RBP18.05■□□□□ 0.48
PTPN18-216ENST00000495400 ASCC2Q9H1I8 757 aaPredicted RBP18.05■□□□□ 0.48
PTPN18-216ENST00000495400 PIH1D3Q9NQM4 214 aaKnown RBP18.05■□□□□ 0.48
PTPN18-216ENST00000495400 DBNLQ9UJU6 430 aaKnown RBP18.05■□□□□ 0.48
PTPN18-216ENST00000495400 TAOK2Q9UL54 1235 aa18.05■□□□□ 0.48
PTPN18-216ENST00000495400 MYH1P12882 1939 aa18.04■□□□□ 0.48
PTPN18-216ENST00000495400 FARP2O94887 1054 aaPredicted RBP18.04■□□□□ 0.48
PTPN18-216ENST00000495400 RLBP1P12271 317 aa18.04■□□□□ 0.48
PTPN18-216ENST00000495400 CRACR2BQ8N4Y2 399 aaPredicted RBP18.04■□□□□ 0.48
PTPN18-216ENST00000495400 TRIM34Q9BYJ4 488 aa18.04■□□□□ 0.48
PTPN18-216ENST00000495400 CCDC8Q9H0W5 538 aaPredicted RBP18.04■□□□□ 0.48
PTPN18-216ENST00000495400 DNAJC18Q9H819 358 aa18.04■□□□□ 0.48
PTPN18-216ENST00000495400 GINM1Q9NU53 330 aa18.04■□□□□ 0.48
PTPN18-216ENST00000495400 PALD1Q9ULE6 856 aa18.04■□□□□ 0.48
PTPN18-216ENST00000495400 TFRCP02786 760 aaKnown RBP18.03■□□□□ 0.48
PTPN18-216ENST00000495400 BACE1P56817 501 aa18.03■□□□□ 0.48
PTPN18-216ENST00000495400 MTMR2Q13614 643 aa18.03■□□□□ 0.48
PTPN18-216ENST00000495400 EAF2Q96CJ1 260 aaPredicted RBP18.03■□□□□ 0.48
PTPN18-216ENST00000495400 TLR7Q9NYK1 1049 aaKnown RBP18.03■□□□□ 0.48
PTPN18-216ENST00000495400 TMOD4Q9NZQ9 345 aa18.03■□□□□ 0.48
PTPN18-216ENST00000495400 C19orf81C9J6K1 198 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms