RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 SLFNL1Q499Z3 407 aa12.96□□□□□ -0.33
NELFE-213ENST00000494956 HSP90AB4PQ58FF6 505 aa12.96□□□□□ -0.33
NELFE-213ENST00000494956 FBXO46Q6PJ61 603 aaPredicted RBP12.96□□□□□ -0.33
NELFE-213ENST00000494956 CLASRPQ8N2M8 674 aaKnown RBP12.96□□□□□ -0.33
NELFE-213ENST00000494956 NOL10Q9BSC4 688 aaKnown RBP12.96□□□□□ -0.33
NELFE-213ENST00000494956 ZFYVE28Q9HCC9 887 aa12.96□□□□□ -0.33
NELFE-213ENST00000494956 SAP30BPQ9UHR5 308 aaKnown RBP12.96□□□□□ -0.33
NELFE-213ENST00000494956 PALD1Q9ULE6 856 aa12.96□□□□□ -0.33
NELFE-213ENST00000494956 FLT1P17948 1338 aa12.95□□□□□ -0.34
NELFE-213ENST00000494956 PDHXO00330 501 aa12.95□□□□□ -0.34
NELFE-213ENST00000494956 BAG3O95817 575 aa12.95□□□□□ -0.34
NELFE-213ENST00000494956 CHGBP05060 677 aa12.95□□□□□ -0.34
NELFE-213ENST00000494956 PPP4CP60510 307 aa12.95□□□□□ -0.34
NELFE-213ENST00000494956 JAG1P78504 1218 aa12.95□□□□□ -0.34
NELFE-213ENST00000494956 GPAT2Q6NUI2 795 aa12.95□□□□□ -0.34
NELFE-213ENST00000494956 DNAJC2Q99543 621 aaKnown RBP12.95□□□□□ -0.34
NELFE-213ENST00000494956 DNAJC18Q9H819 358 aa12.95□□□□□ -0.34
NELFE-213ENST00000494956 CPA4Q9UI42 421 aa12.95□□□□□ -0.34
NELFE-213ENST00000494956 AFG3L2Q9Y4W6 797 aa12.95□□□□□ -0.34
NELFE-213ENST00000494956 COL2A1P02458 1487 aaPredicted RBP12.94□□□□□ -0.34
NELFE-213ENST00000494956 TRIM75PA6NK02 468 aa12.94□□□□□ -0.34
NELFE-213ENST00000494956 TLR2O60603 784 aa12.94□□□□□ -0.34
NELFE-213ENST00000494956 CTNND1O60716 968 aaKnown RBP12.94□□□□□ -0.34
NELFE-213ENST00000494956 IFIT2P09913 472 aaKnown RBP12.94□□□□□ -0.34
NELFE-213ENST00000494956 CYP2C8P10632 490 aa12.94□□□□□ -0.34
NELFE-213ENST00000494956 CTGFP29279 349 aa12.94□□□□□ -0.34
NELFE-213ENST00000494956 PKN2Q16513 984 aaKnown RBP12.94□□□□□ -0.34
NELFE-213ENST00000494956 GADL1Q6ZQY3 521 aa12.94□□□□□ -0.34
NELFE-213ENST00000494956 ERO1AQ96HE7 468 aa12.94□□□□□ -0.34
NELFE-213ENST00000494956 BOLA2Q9H3K6 86 aa12.94□□□□□ -0.34
NELFE-213ENST00000494956 PICK1Q9NRD5 415 aa12.94□□□□□ -0.34
NELFE-213ENST00000494956 GOLIM4O00461 696 aa12.93□□□□□ -0.34
NELFE-213ENST00000494956 TBC1D12O60347 775 aa12.93□□□□□ -0.34
NELFE-213ENST00000494956 RAB11FIP3O75154 756 aa12.93□□□□□ -0.34
NELFE-213ENST00000494956 RGS19P49795 217 aa12.93□□□□□ -0.34
NELFE-213ENST00000494956 EVX2Q03828 476 aa12.93□□□□□ -0.34
NELFE-213ENST00000494956 ANKRD23Q86SG2 305 aa12.93□□□□□ -0.34
NELFE-213ENST00000494956 EFCC1Q9HA90 598 aa12.93□□□□□ -0.34
NELFE-213ENST00000494956 PTPN22Q9Y2R2 807 aa12.93□□□□□ -0.34
NELFE-213ENST00000494956 ADGRA2Q96PE1 1338 aa12.92□□□□□ -0.34
NELFE-213ENST00000494956 A0A0G2JLL6 359 aaPredicted RBP12.92□□□□□ -0.34
NELFE-213ENST00000494956 CXCL11O14625 94 aa12.92□□□□□ -0.34
NELFE-213ENST00000494956 GDF11O95390 407 aa12.92□□□□□ -0.34
NELFE-213ENST00000494956 MAP4K4O95819 1239 aaPredicted RBP12.92□□□□□ -0.34
NELFE-213ENST00000494956 PDE6AP16499 860 aa12.92□□□□□ -0.34
NELFE-213ENST00000494956 PLCG2P16885 1265 aa12.92□□□□□ -0.34
NELFE-213ENST00000494956 CAP2P40123 477 aa12.92□□□□□ -0.34
NELFE-213ENST00000494956 MAP3K12Q12852 859 aa12.92□□□□□ -0.34
NELFE-213ENST00000494956 PRRT2Q7Z6L0 340 aaPredicted RBP12.92□□□□□ -0.34
NELFE-213ENST00000494956 CHMP4BQ9H444 224 aaKnown RBP12.92□□□□□ -0.34
NELFE-213ENST00000494956 NAV1Q8NEY1 1877 aa12.91□□□□□ -0.34
NELFE-213ENST00000494956 USP5P45974 858 aa12.91□□□□□ -0.34
NELFE-213ENST00000494956 MLLT1Q03111 559 aaPredicted RBP12.91□□□□□ -0.34
NELFE-213ENST00000494956 SPP2Q13103 211 aa12.91□□□□□ -0.34
NELFE-213ENST00000494956 TREML2Q5T2D2 321 aa12.91□□□□□ -0.34
NELFE-213ENST00000494956 SLC9C2Q5TAH2 1124 aa12.91□□□□□ -0.34
NELFE-213ENST00000494956 TSHZ3Q63HK5 1081 aa12.91□□□□□ -0.34
NELFE-213ENST00000494956 C17orf99Q6UX52 265 aa12.91□□□□□ -0.34
NELFE-213ENST00000494956 RIOK1Q9BRS2 568 aaKnown RBP12.91□□□□□ -0.34
NELFE-213ENST00000494956 PI4KBQ9UBF8 816 aa12.91□□□□□ -0.34
NELFE-213ENST00000494956 PCDHB15Q9Y5E8 787 aa12.91□□□□□ -0.34
NELFE-213ENST00000494956 PTCH2Q9Y6C5 1203 aa12.91□□□□□ -0.34
NELFE-213ENST00000494956 MYH7P12883 1935 aa12.91□□□□□ -0.34
NELFE-213ENST00000494956 MGAMO43451 1857 aa12.91□□□□□ -0.34
NELFE-213ENST00000494956 DDX60LQ5H9U9 1706 aaKnown RBP12.91□□□□□ -0.34
NELFE-213ENST00000494956 ZNF532Q9HCE3 1301 aa12.9□□□□□ -0.34
NELFE-213ENST00000494956 LOC285556D6RIA3 1793 aa12.9□□□□□ -0.34
NELFE-213ENST00000494956 MYCP01106 439 aaPredicted RBP12.9□□□□□ -0.34
NELFE-213ENST00000494956 RRP1P56182 461 aaKnown RBP12.9□□□□□ -0.34
NELFE-213ENST00000494956 LACTBP83111 547 aaPredicted RBP12.9□□□□□ -0.34
NELFE-213ENST00000494956 CRACR2BQ8N4Y2 399 aaPredicted RBP12.9□□□□□ -0.34
NELFE-213ENST00000494956 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.9□□□□□ -0.34
NELFE-213ENST00000494956 LRRCC1Q9C099 1032 aa12.9□□□□□ -0.34
NELFE-213ENST00000494956 DHX36Q9H2U1 1008 aaKnown RBP12.9□□□□□ -0.34
NELFE-213ENST00000494956 ZCCHC17Q9NP64 241 aaKnown RBP12.9□□□□□ -0.34
NELFE-213ENST00000494956 PAG1Q9NWQ8 432 aa12.9□□□□□ -0.34
NELFE-213ENST00000494956 HERC5Q9UII4 1024 aaKnown RBP12.9□□□□□ -0.34
NELFE-213ENST00000494956 BAZ2AQ9UIF9 1905 aaKnown RBP12.9□□□□□ -0.35
NELFE-213ENST00000494956 MAGEB6P1A0A0J9YX57 407 aa12.89□□□□□ -0.35
NELFE-213ENST00000494956 TCRBV5S4A2TA0A5A2 114 aa12.89□□□□□ -0.35
NELFE-213ENST00000494956 ATP5JP18859 108 aa12.89□□□□□ -0.35
NELFE-213ENST00000494956 HMGCS2P54868 508 aa12.89□□□□□ -0.35
NELFE-213ENST00000494956 TTF1Q15361 905 aaPredicted RBP12.89□□□□□ -0.35
NELFE-213ENST00000494956 LCORLQ8N3X6 602 aa12.89□□□□□ -0.35
NELFE-213ENST00000494956 SDR42E1Q8WUS8 393 aa12.89□□□□□ -0.35
NELFE-213ENST00000494956 CRBNQ96SW2 442 aa12.89□□□□□ -0.35
NELFE-213ENST00000494956 DCTPP1Q9H773 170 aa12.89□□□□□ -0.35
NELFE-213ENST00000494956 POTEFA5A3E0 1075 aa12.88□□□□□ -0.35
NELFE-213ENST00000494956 USP17L5A8MUK1 530 aa12.88□□□□□ -0.35
NELFE-213ENST00000494956 SMIM22K7EJ46 135 aa12.88□□□□□ -0.35
NELFE-213ENST00000494956 PRKAB2O43741 272 aa12.88□□□□□ -0.35
NELFE-213ENST00000494956 HLA-DOAP06340 250 aa12.88□□□□□ -0.35
NELFE-213ENST00000494956 PSMC4P43686 418 aa12.88□□□□□ -0.35
NELFE-213ENST00000494956 PLCD1P51178 756 aa12.88□□□□□ -0.35
NELFE-213ENST00000494956 FASTKD5Q7L8L6 764 aaKnown RBP12.88□□□□□ -0.35
NELFE-213ENST00000494956 TRIM47Q96LD4 638 aa12.88□□□□□ -0.35
NELFE-213ENST00000494956 PARK7Q99497 189 aaKnown RBP12.88□□□□□ -0.35
NELFE-213ENST00000494956 HAUS7Q99871 368 aa12.88□□□□□ -0.35
NELFE-213ENST00000494956 TRIM34Q9BYJ4 488 aa12.88□□□□□ -0.35
NELFE-213ENST00000494956 ARMT1Q9H993 441 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms