RNA–Protein interactions for RNA: ENST00000494943.5

PHC3-214, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best) BASIC

Gene PHC3, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-214ENST00000494943 GHRP10912 638 aa6.84□□□□□ -1.31
PHC3-214ENST00000494943 MTX1Q13505 466 aa6.84□□□□□ -1.31
PHC3-214ENST00000494943 LAMB3Q13751 1172 aa6.84□□□□□ -1.31
PHC3-214ENST00000494943 SAFB2Q14151 953 aaKnown RBP eCLIP6.84□□□□□ -1.31
PHC3-214ENST00000494943 CCDC96Q2M329 555 aa6.84□□□□□ -1.31
PHC3-214ENST00000494943 NFXL1Q6ZNB6 911 aa6.84□□□□□ -1.31
PHC3-214ENST00000494943 CENPKQ9BS16 269 aa6.84□□□□□ -1.31
PHC3-214ENST00000494943 IFT172Q9UG01 1749 aa6.84□□□□□ -1.31
PHC3-214ENST00000494943 FANCAO15360 1455 aa6.84□□□□□ -1.31
PHC3-214ENST00000494943 USP32Q8NFA0 1604 aa6.84□□□□□ -1.31
PHC3-214ENST00000494943 N4BP3O15049 544 aa6.84□□□□□ -1.31
PHC3-214ENST00000494943 IDEP14735 1019 aa6.84□□□□□ -1.31
PHC3-214ENST00000494943 TCP1P17987 556 aaKnown RBP6.84□□□□□ -1.31
PHC3-214ENST00000494943 CCND1P24385 295 aa6.84□□□□□ -1.31
PHC3-214ENST00000494943 USP14P54578 494 aa6.84□□□□□ -1.31
PHC3-214ENST00000494943 BIRC3Q13489 604 aa6.84□□□□□ -1.31
PHC3-214ENST00000494943 IQCB1Q15051 598 aa6.84□□□□□ -1.31
PHC3-214ENST00000494943 KIAA0753Q2KHM9 967 aa6.84□□□□□ -1.31
PHC3-214ENST00000494943 BEND6Q5SZJ8 279 aaPredicted RBP6.84□□□□□ -1.31
PHC3-214ENST00000494943 CCDC122Q5T0U0 273 aa6.84□□□□□ -1.31
PHC3-214ENST00000494943 ARHGAP24Q8N264 748 aa6.84□□□□□ -1.31
PHC3-214ENST00000494943 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.84□□□□□ -1.31
PHC3-214ENST00000494943 SLC40A1Q9NP59 571 aa6.84□□□□□ -1.31
PHC3-214ENST00000494943 RCOR1Q9UKL0 485 aa6.84□□□□□ -1.31
PHC3-214ENST00000494943 HPCAL4Q9UM19 191 aa6.84□□□□□ -1.31
PHC3-214ENST00000494943 CPSF1Q10570 1443 aaKnown RBP6.84□□□□□ -1.31
PHC3-214ENST00000494943 MYO3AQ8NEV4 1616 aa6.84□□□□□ -1.32
PHC3-214ENST00000494943 ANO9A1A5B4 782 aa6.84□□□□□ -1.32
PHC3-214ENST00000494943 ALDH3A1P30838 453 aa6.84□□□□□ -1.32
PHC3-214ENST00000494943 PDE6BP35913 854 aa6.84□□□□□ -1.32
PHC3-214ENST00000494943 INTS8Q75QN2 995 aaKnown RBP6.84□□□□□ -1.32
PHC3-214ENST00000494943 PNMA8AQ86V59 439 aaPredicted RBP6.84□□□□□ -1.32
PHC3-214ENST00000494943 NLRP14Q86W24 1093 aa6.84□□□□□ -1.32
PHC3-214ENST00000494943 IL17RAQ96F46 866 aa6.84□□□□□ -1.32
PHC3-214ENST00000494943 ZMAT2Q96NC0 199 aaKnown RBP6.84□□□□□ -1.32
PHC3-214ENST00000494943 OLFM3Q96PB7 478 aa6.84□□□□□ -1.32
PHC3-214ENST00000494943 SIL1Q9H173 461 aa6.84□□□□□ -1.32
PHC3-214ENST00000494943 A0A0G2JS52 829 aa6.83□□□□□ -1.32
PHC3-214ENST00000494943 SEMA3EO15041 775 aa6.83□□□□□ -1.32
PHC3-214ENST00000494943 ATP5HO75947 161 aa6.83□□□□□ -1.32
PHC3-214ENST00000494943 GSTA1P08263 222 aa6.83□□□□□ -1.32
PHC3-214ENST00000494943 RPSAP08865 295 aaKnown RBP6.83□□□□□ -1.32
PHC3-214ENST00000494943 NR1D1P20393 614 aa6.83□□□□□ -1.32
PHC3-214ENST00000494943 HSP90AA5PQ58FG0 334 aa6.83□□□□□ -1.32
PHC3-214ENST00000494943 TTC39AQ5SRH9 613 aa6.83□□□□□ -1.32
PHC3-214ENST00000494943 ZNF513Q8N8E2 541 aaPredicted RBP6.83□□□□□ -1.32
PHC3-214ENST00000494943 SGSM3Q96HU1 749 aa6.83□□□□□ -1.32
PHC3-214ENST00000494943 SEC62Q99442 399 aaKnown RBP6.83□□□□□ -1.32
PHC3-214ENST00000494943 MPHOSPH6Q99547 160 aaKnown RBP6.83□□□□□ -1.32
PHC3-214ENST00000494943 SLC12A5Q9H2X9 1139 aa6.83□□□□□ -1.32
PHC3-214ENST00000494943 GGNBP2Q9H3C7 697 aa6.83□□□□□ -1.32
PHC3-214ENST00000494943 GUCA1BQ9UMX6 200 aa6.83□□□□□ -1.32
PHC3-214ENST00000494943 TRIM35Q9UPQ4 493 aa6.83□□□□□ -1.32
PHC3-214ENST00000494943 NEO1Q92859 1461 aa6.83□□□□□ -1.32
PHC3-214ENST00000494943 CDHR2Q9BYE9 1310 aa6.83□□□□□ -1.32
PHC3-214ENST00000494943 SEMA3FQ13275 785 aa6.83□□□□□ -1.32
PHC3-214ENST00000494943 MUM1Q2TAK8 710 aa6.83□□□□□ -1.32
PHC3-214ENST00000494943 CFAP70Q5T0N1 1121 aa6.83□□□□□ -1.32
PHC3-214ENST00000494943 AEBP2Q6ZN18 517 aaPredicted RBP6.83□□□□□ -1.32
PHC3-214ENST00000494943 ARHGAP22Q7Z5H3 698 aa6.83□□□□□ -1.32
PHC3-214ENST00000494943 AACSQ86V21 672 aa6.83□□□□□ -1.32
PHC3-214ENST00000494943 ZKSCAN4Q969J2 545 aaPredicted RBP6.83□□□□□ -1.32
PHC3-214ENST00000494943 HYOU1Q9Y4L1 999 aa6.83□□□□□ -1.32
PHC3-214ENST00000494943 SAMM50Q9Y512 469 aa6.83□□□□□ -1.32
PHC3-214ENST00000494943 CETN3O15182 167 aa6.83□□□□□ -1.32
PHC3-214ENST00000494943 E2F5Q15329 346 aa6.83□□□□□ -1.32
PHC3-214ENST00000494943 RHPN1Q8TCX5 695 aa6.83□□□□□ -1.32
PHC3-214ENST00000494943 CPLX3Q8WVH0 158 aa6.83□□□□□ -1.32
PHC3-214ENST00000494943 RTEL1Q9NZ71 1219 aa6.83□□□□□ -1.32
PHC3-214ENST00000494943 RGL1Q9NZL6 768 aa6.83□□□□□ -1.32
PHC3-214ENST00000494943 PPFIA2O75334 1257 aa6.83□□□□□ -1.32
PHC3-214ENST00000494943 GSTA2P09210 222 aa6.83□□□□□ -1.32
PHC3-214ENST00000494943 SKIP12755 728 aa6.83□□□□□ -1.32
PHC3-214ENST00000494943 CMA1P23946 247 aa6.83□□□□□ -1.32
PHC3-214ENST00000494943 IRAK1P51617 712 aa6.83□□□□□ -1.32
PHC3-214ENST00000494943 CFAP221Q4G0U5 840 aa6.83□□□□□ -1.32
PHC3-214ENST00000494943 LCA5Q86VQ0 697 aa6.83□□□□□ -1.32
PHC3-214ENST00000494943 CCDC13Q8IYE1 715 aa6.83□□□□□ -1.32
PHC3-214ENST00000494943 STMN2Q93045 179 aa6.83□□□□□ -1.32
PHC3-214ENST00000494943 BICD1Q96G01 975 aa6.83□□□□□ -1.32
PHC3-214ENST00000494943 YIPF3Q9GZM5 350 aa6.83□□□□□ -1.32
PHC3-214ENST00000494943 UBA5Q9GZZ9 404 aa6.83□□□□□ -1.32
PHC3-214ENST00000494943 PAIP2BQ9ULR5 123 aaKnown RBP6.83□□□□□ -1.32
PHC3-214ENST00000494943 SPG7Q9UQ90 795 aa6.83□□□□□ -1.32
PHC3-214ENST00000494943 AKAP2Q9Y2D5 859 aa6.83□□□□□ -1.32
PHC3-214ENST00000494943 RIMS2Q9UQ26 1411 aa6.82□□□□□ -1.32
PHC3-214ENST00000494943 ZNF202O95125 648 aa6.82□□□□□ -1.32
PHC3-214ENST00000494943 VIMP08670 466 aaKnown RBP6.82□□□□□ -1.32
PHC3-214ENST00000494943 CNGA1P29973 690 aa6.82□□□□□ -1.32
PHC3-214ENST00000494943 GGCXP38435 758 aa6.82□□□□□ -1.32
PHC3-214ENST00000494943 ARMCX5Q6P1M9 558 aa6.82□□□□□ -1.32
PHC3-214ENST00000494943 LRIG3Q6UXM1 1119 aa6.82□□□□□ -1.32
PHC3-214ENST00000494943 LMBR1Q8WVP7 490 aa6.82□□□□□ -1.32
PHC3-214ENST00000494943 CUL5Q93034 780 aa6.82□□□□□ -1.32
PHC3-214ENST00000494943 KIF9Q9HAQ2 790 aa6.82□□□□□ -1.32
PHC3-214ENST00000494943 TXLNGQ9NUQ3 528 aa6.82□□□□□ -1.32
PHC3-214ENST00000494943 MADDQ8WXG6 1647 aa6.82□□□□□ -1.32
PHC3-214ENST00000494943 ARHGEF40Q8TER5 1519 aa6.82□□□□□ -1.32
PHC3-214ENST00000494943 PTPRTO14522 1441 aa6.82□□□□□ -1.32
PHC3-214ENST00000494943 UBN2Q6ZU65 1347 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms