RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, humanhuman

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-222ENST00000494672 IGF2BP3O00425 579 aaKnown RBP eCLIP7.98□□□□□ -1.13
CCDC66-222ENST00000494672 PDIA4P13667 645 aaKnown RBP7.98□□□□□ -1.13
CCDC66-222ENST00000494672 AOC3Q16853 763 aa7.98□□□□□ -1.13
CCDC66-222ENST00000494672 SND1Q7KZF4 910 aaKnown RBP eCLIP7.98□□□□□ -1.13
CCDC66-222ENST00000494672 HRASLS5Q96KN8 279 aa7.98□□□□□ -1.13
CCDC66-222ENST00000494672 HEXIM2Q96MH2 286 aaKnown RBP7.98□□□□□ -1.13
CCDC66-222ENST00000494672 SNX11Q9Y5W9 270 aa7.98□□□□□ -1.13
CCDC66-222ENST00000494672 ANKRD33BA6NCL7 494 aa7.97□□□□□ -1.13
CCDC66-222ENST00000494672 BIN1O00499 593 aa7.97□□□□□ -1.13
CCDC66-222ENST00000494672 CD8BP10966 210 aa7.97□□□□□ -1.13
CCDC66-222ENST00000494672 ITGB5P18084 799 aa7.97□□□□□ -1.13
CCDC66-222ENST00000494672 LMNB1P20700 586 aa7.97□□□□□ -1.13
CCDC66-222ENST00000494672 INPP5AQ14642 412 aa7.97□□□□□ -1.13
CCDC66-222ENST00000494672 CCDC85BQ15834 202 aaPredicted RBP7.97□□□□□ -1.13
CCDC66-222ENST00000494672 TTBK2Q6IQ55 1244 aa7.97□□□□□ -1.13
CCDC66-222ENST00000494672 PLAGL2Q9UPG8 496 aa7.97□□□□□ -1.13
CCDC66-222ENST00000494672 SNCAIPQ9Y6H5 919 aa7.97□□□□□ -1.13
CCDC66-222ENST00000494672 ITIH2P19823 946 aa7.96□□□□□ -1.14
CCDC66-222ENST00000494672 FUT4P22083 530 aa7.96□□□□□ -1.14
CCDC66-222ENST00000494672 PTPN11Q06124 597 aaPredicted RBP7.96□□□□□ -1.14
CCDC66-222ENST00000494672 ZNF792Q3KQV3 632 aa7.96□□□□□ -1.14
CCDC66-222ENST00000494672 LRFN4Q6PJG9 635 aa7.96□□□□□ -1.14
CCDC66-222ENST00000494672 CYFIP1Q7L576 1253 aa7.96□□□□□ -1.14
CCDC66-222ENST00000494672 FAM214BQ7L5A3 538 aa7.96□□□□□ -1.14
CCDC66-222ENST00000494672 WFDC3Q8IUB2 231 aa7.96□□□□□ -1.14
CCDC66-222ENST00000494672 PLPPR2Q96GM1 343 aa7.96□□□□□ -1.14
CCDC66-222ENST00000494672 DUSP9Q99956 384 aaKnown RBP7.96□□□□□ -1.14
CCDC66-222ENST00000494672 U3KQE9 123 aa7.96□□□□□ -1.14
CCDC66-222ENST00000494672 PRAMEF27A3QJZ7 478 aa7.95□□□□□ -1.14
CCDC66-222ENST00000494672 RPS26P62854 115 aaKnown RBP7.95□□□□□ -1.14
CCDC66-222ENST00000494672 UBE3DQ7Z6J8 389 aa7.95□□□□□ -1.14
CCDC66-222ENST00000494672 PI4K2BQ8TCG2 481 aa7.95□□□□□ -1.14
CCDC66-222ENST00000494672 TNKS2Q9H2K2 1166 aa7.95□□□□□ -1.14
CCDC66-222ENST00000494672 GNAT3A8MTJ3 354 aa7.94□□□□□ -1.14
CCDC66-222ENST00000494672 LRIG2O94898 1065 aa7.94□□□□□ -1.14
CCDC66-222ENST00000494672 YBX3P16989 372 aaKnown RBP eCLIP7.94□□□□□ -1.14
CCDC66-222ENST00000494672 ETF1P62495 437 aaKnown RBP7.94□□□□□ -1.14
CCDC66-222ENST00000494672 ANGEL2Q5VTE6 544 aaKnown RBP7.94□□□□□ -1.14
CCDC66-222ENST00000494672 ARMCX6Q7L4S7 300 aa7.94□□□□□ -1.14
CCDC66-222ENST00000494672 ASB11Q8WXH4 323 aa7.94□□□□□ -1.14
CCDC66-222ENST00000494672 FOXQ1Q9C009 403 aa7.94□□□□□ -1.14
CCDC66-222ENST00000494672 WNT10AQ9GZT5 417 aa7.94□□□□□ -1.14
CCDC66-222ENST00000494672 CD96P40200 585 aa7.93□□□□□ -1.14
CCDC66-222ENST00000494672 WIPI1Q5MNZ9 446 aaPredicted RBP7.93□□□□□ -1.14
CCDC66-222ENST00000494672 GAL3ST3Q96A11 431 aa7.93□□□□□ -1.14
CCDC66-222ENST00000494672 PRDM5Q9NQX1 630 aaPredicted RBP7.93□□□□□ -1.14
CCDC66-222ENST00000494672 EOMESO95936 686 aa7.92□□□□□ -1.14
CCDC66-222ENST00000494672 CAP2P40123 477 aa7.92□□□□□ -1.14
CCDC66-222ENST00000494672 LCE3BQ5TA77 95 aa7.92□□□□□ -1.14
CCDC66-222ENST00000494672 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.92□□□□□ -1.14
CCDC66-222ENST00000494672 AGMOQ6ZNB7 445 aa7.92□□□□□ -1.14
CCDC66-222ENST00000494672 HID1Q8IV36 788 aa7.92□□□□□ -1.14
CCDC66-222ENST00000494672 MFSD2AQ8NA29 543 aa7.92□□□□□ -1.14
CCDC66-222ENST00000494672 RC3H2Q9HBD1 1191 aaKnown RBP7.92□□□□□ -1.14
CCDC66-222ENST00000494672 PARP2Q9UGN5 583 aa7.92□□□□□ -1.14
CCDC66-222ENST00000494672 RNASE1P07998 156 aaKnown RBP7.91□□□□□ -1.14
CCDC66-222ENST00000494672 RLBP1P12271 317 aa7.91□□□□□ -1.14
CCDC66-222ENST00000494672 XPCQ01831 940 aaPredicted RBP7.91□□□□□ -1.14
CCDC66-222ENST00000494672 PSMD2Q13200 908 aa7.91□□□□□ -1.14
CCDC66-222ENST00000494672 SLBPQ14493 270 aaKnown RBP eCLIP7.91□□□□□ -1.14
CCDC66-222ENST00000494672 DIEXFQ68CQ4 756 aaKnown RBP7.91□□□□□ -1.14
CCDC66-222ENST00000494672 ATG4DQ86TL0 474 aaPredicted RBP7.91□□□□□ -1.14
CCDC66-222ENST00000494672 KRTAP19-1Q8IUB9 90 aa7.91□□□□□ -1.14
CCDC66-222ENST00000494672 KRTAP1-3Q8IUG1 177 aa7.91□□□□□ -1.14
CCDC66-222ENST00000494672 FBRSQ9HAH7 460 aa7.91□□□□□ -1.14
CCDC66-222ENST00000494672 MBNL3Q9NUK0 354 aaKnown RBP7.91□□□□□ -1.14
CCDC66-222ENST00000494672 RNF19AQ9NV58 838 aa7.91□□□□□ -1.14
CCDC66-222ENST00000494672 MAPK8IP1Q9UQF2 711 aa7.91□□□□□ -1.14
CCDC66-222ENST00000494672 CLCN7P51798 805 aa7.9□□□□□ -1.14
CCDC66-222ENST00000494672 MAP3K11Q16584 847 aa7.9□□□□□ -1.14
CCDC66-222ENST00000494672 NKPD1Q17RQ9 610 aa7.9□□□□□ -1.14
CCDC66-222ENST00000494672 SLC23A3Q6PIS1 610 aa7.9□□□□□ -1.14
CCDC66-222ENST00000494672 SPACA3Q8IXA5 215 aa7.9□□□□□ -1.14
CCDC66-222ENST00000494672 TPX2Q9ULW0 747 aaKnown RBP7.9□□□□□ -1.14
CCDC66-222ENST00000494672 PCDHB5Q9Y5E4 795 aa7.9□□□□□ -1.14
CCDC66-222ENST00000494672 TACC3Q9Y6A5 838 aa7.9□□□□□ -1.14
CCDC66-222ENST00000494672 SLITRK5O94991 958 aa7.89□□□□□ -1.15
CCDC66-222ENST00000494672 PAPLNO95428 1278 aa7.89□□□□□ -1.15
CCDC66-222ENST00000494672 GRK4P32298 578 aa7.89□□□□□ -1.15
CCDC66-222ENST00000494672 CDK8P49336 464 aa7.89□□□□□ -1.15
CCDC66-222ENST00000494672 LIG3P49916 1009 aa7.89□□□□□ -1.15
CCDC66-222ENST00000494672 DAB2P98082 770 aa7.89□□□□□ -1.15
CCDC66-222ENST00000494672 SEPT6Q14141 434 aa7.89□□□□□ -1.15
CCDC66-222ENST00000494672 TAF1CQ15572 869 aaPredicted RBP7.89□□□□□ -1.15
CCDC66-222ENST00000494672 SFRP5Q5T4F7 317 aa7.89□□□□□ -1.15
CCDC66-222ENST00000494672 MIPEPQ99797 713 aa7.89□□□□□ -1.15
CCDC66-222ENST00000494672 MIR1-1HGQ9H1L0 117 aa7.89□□□□□ -1.15
CCDC66-222ENST00000494672 FAM155AB1AL88 458 aaPredicted RBP7.88□□□□□ -1.15
CCDC66-222ENST00000494672 GFRA2O00451 464 aa7.88□□□□□ -1.15
CCDC66-222ENST00000494672 IKZF1Q13422 519 aa7.88□□□□□ -1.15
CCDC66-222ENST00000494672 NKG7Q16617 165 aa7.88□□□□□ -1.15
CCDC66-222ENST00000494672 MEI1Q5TIA1 1274 aa7.88□□□□□ -1.15
CCDC66-222ENST00000494672 ZNF746Q6NUN9 644 aaPredicted RBP7.88□□□□□ -1.15
CCDC66-222ENST00000494672 NPAS4Q8IUM7 802 aa7.88□□□□□ -1.15
CCDC66-222ENST00000494672 ADAMTS6Q9UKP5 1117 aa7.88□□□□□ -1.15
CCDC66-222ENST00000494672 CST3P01034 146 aaPredicted RBP7.87□□□□□ -1.15
CCDC66-222ENST00000494672 ZP2Q05996 745 aa7.87□□□□□ -1.15
CCDC66-222ENST00000494672 TSNAXIP1Q2TAA8 658 aa7.87□□□□□ -1.15
CCDC66-222ENST00000494672 OGFOD2Q6N063 350 aa7.87□□□□□ -1.15
CCDC66-222ENST00000494672 LETMD1Q6P1Q0 360 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms