RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 TNNQ9UQP3 1299 aa22.42■■□□□ 1.18
RNF40-203ENST00000493683 FLOT1O75955 427 aa22.42■■□□□ 1.18
RNF40-203ENST00000493683 CFAP221Q4G0U5 840 aa22.42■■□□□ 1.18
RNF40-203ENST00000493683 LGSNQ5TDP6 509 aa22.42■■□□□ 1.18
RNF40-203ENST00000493683 ZNF202O95125 648 aa22.42■■□□□ 1.18
RNF40-203ENST00000493683 RXRAP19793 462 aa22.42■■□□□ 1.18
RNF40-203ENST00000493683 IRX3P78415 501 aaPredicted RBP22.42■■□□□ 1.18
RNF40-203ENST00000493683 PPFIA4O75335 1185 aa22.41■■□□□ 1.18
RNF40-203ENST00000493683 HPDP32754 393 aaPredicted RBP22.41■■□□□ 1.18
RNF40-203ENST00000493683 TESK2Q96S53 571 aa22.41■■□□□ 1.18
RNF40-203ENST00000493683 PLIN2Q99541 437 aa22.41■■□□□ 1.18
RNF40-203ENST00000493683 PARP2Q9UGN5 583 aa22.41■■□□□ 1.18
RNF40-203ENST00000493683 MAST3O60307 1309 aa22.41■■□□□ 1.18
RNF40-203ENST00000493683 RTCBQ9Y3I0 505 aaKnown RBP22.41■■□□□ 1.18
RNF40-203ENST00000493683 ZMYM3Q14202 1370 aa22.41■■□□□ 1.18
RNF40-203ENST00000493683 E7EVH7 732 aa22.41■■□□□ 1.18
RNF40-203ENST00000493683 CEP85LQ5SZL2 805 aa22.41■■□□□ 1.18
RNF40-203ENST00000493683 EYA1Q99502 592 aa22.41■■□□□ 1.18
RNF40-203ENST00000493683 RAPGEF6Q8TEU7 1601 aa22.41■■□□□ 1.18
RNF40-203ENST00000493683 B4E1Z4 1266 aa22.41■■□□□ 1.18
RNF40-203ENST00000493683 NAA25Q14CX7 972 aa22.41■■□□□ 1.18
RNF40-203ENST00000493683 CCT6BQ92526 530 aa22.41■■□□□ 1.18
RNF40-203ENST00000493683 SEC24BO95487 1268 aa22.4■■□□□ 1.18
RNF40-203ENST00000493683 PIK3AP1Q6ZUJ8 805 aa22.4■■□□□ 1.18
RNF40-203ENST00000493683 KDM2BQ8NHM5 1336 aa22.4■■□□□ 1.18
RNF40-203ENST00000493683 POLR2DO15514 142 aaKnown RBP22.4■■□□□ 1.18
RNF40-203ENST00000493683 DPH6Q7L8W6 267 aa22.4■■□□□ 1.18
RNF40-203ENST00000493683 IP6K1Q92551 441 aa22.4■■□□□ 1.18
RNF40-203ENST00000493683 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.4■■□□□ 1.18
RNF40-203ENST00000493683 MAGEA1P43355 309 aa22.4■■□□□ 1.18
RNF40-203ENST00000493683 NONOQ15233 471 aaKnown RBP eCLIP22.4■■□□□ 1.18
RNF40-203ENST00000493683 CCDC117Q8IWD4 279 aaPredicted RBP22.4■■□□□ 1.18
RNF40-203ENST00000493683 KCNG1Q9UIX4 513 aa22.4■■□□□ 1.18
RNF40-203ENST00000493683 TEX14Q8IWB6 1497 aa22.4■■□□□ 1.18
RNF40-203ENST00000493683 IBTKQ9P2D0 1353 aaPredicted RBP22.4■■□□□ 1.18
RNF40-203ENST00000493683 POSTNQ15063 836 aa22.39■■□□□ 1.18
RNF40-203ENST00000493683 USH1CQ9Y6N9 552 aa22.39■■□□□ 1.18
RNF40-203ENST00000493683 SSH2Q76I76 1423 aa22.39■■□□□ 1.18
RNF40-203ENST00000493683 TEX11Q8IYF3 940 aa22.39■■□□□ 1.18
RNF40-203ENST00000493683 ZMYM4Q5VZL5 1548 aa22.39■■□□□ 1.17
RNF40-203ENST00000493683 KBTBD3Q8NAB2 608 aa22.39■■□□□ 1.17
RNF40-203ENST00000493683 KIFC2Q96AC6 838 aa22.39■■□□□ 1.17
RNF40-203ENST00000493683 FEZ2Q9UHY8 353 aaPredicted RBP22.39■■□□□ 1.17
RNF40-203ENST00000493683 ZNF518AQ6AHZ1 1483 aa22.39■■□□□ 1.17
RNF40-203ENST00000493683 GNA14O95837 355 aa22.39■■□□□ 1.17
RNF40-203ENST00000493683 RBM17Q96I25 401 aaKnown RBP22.39■■□□□ 1.17
RNF40-203ENST00000493683 NSFL1CQ9UNZ2 370 aaKnown RBP22.39■■□□□ 1.17
RNF40-203ENST00000493683 BRD3Q15059 726 aa22.39■■□□□ 1.17
RNF40-203ENST00000493683 CCDC62Q6P9F0 684 aa22.39■■□□□ 1.17
RNF40-203ENST00000493683 RPUSD2Q8IZ73 545 aaKnown RBP22.39■■□□□ 1.17
RNF40-203ENST00000493683 JDP2Q8WYK2 163 aa22.39■■□□□ 1.17
RNF40-203ENST00000493683 NFE2L3Q9Y4A8 694 aa22.39■■□□□ 1.17
RNF40-203ENST00000493683 KRT9P35527 623 aa22.38■■□□□ 1.17
RNF40-203ENST00000493683 PPP2R5EQ16537 467 aa22.38■■□□□ 1.17
RNF40-203ENST00000493683 A0A1W2PP64 1363 aa22.38■■□□□ 1.17
RNF40-203ENST00000493683 PCK1P35558 622 aa22.38■■□□□ 1.17
RNF40-203ENST00000493683 YTHDC2Q9H6S0 1430 aaKnown RBP22.38■■□□□ 1.17
RNF40-203ENST00000493683 ITIH3Q06033 890 aa22.38■■□□□ 1.17
RNF40-203ENST00000493683 PLS1Q14651 629 aa22.38■■□□□ 1.17
RNF40-203ENST00000493683 BIVM-ERCC5R4GMW8 1640 aa22.38■■□□□ 1.17
RNF40-203ENST00000493683 CCNT1O60563 726 aaKnown RBP22.38■■□□□ 1.17
RNF40-203ENST00000493683 BCRP11274 1271 aa22.38■■□□□ 1.17
RNF40-203ENST00000493683 HOXC9P31274 260 aa22.38■■□□□ 1.17
RNF40-203ENST00000493683 VCXQ9H320 206 aa22.38■■□□□ 1.17
RNF40-203ENST00000493683 HELBQ8NG08 1087 aaPredicted RBP22.37■■□□□ 1.17
RNF40-203ENST00000493683 PHACTR3Q96KR7 559 aa22.37■■□□□ 1.17
RNF40-203ENST00000493683 ELF2Q15723 593 aa22.37■■□□□ 1.17
RNF40-203ENST00000493683 WHAMMP3Q1A5X7 153 aa22.37■■□□□ 1.17
RNF40-203ENST00000493683 STRN3Q13033 797 aa22.37■■□□□ 1.17
RNF40-203ENST00000493683 CABS1Q96KC9 395 aa22.37■■□□□ 1.17
RNF40-203ENST00000493683 VEZTQ9HBM0 779 aa22.37■■□□□ 1.17
RNF40-203ENST00000493683 ARHGEF10LQ9HCE6 1279 aa22.37■■□□□ 1.17
RNF40-203ENST00000493683 WWC3Q9ULE0 1092 aa22.37■■□□□ 1.17
RNF40-203ENST00000493683 PARP3Q9Y6F1 533 aa22.37■■□□□ 1.17
RNF40-203ENST00000493683 V9GY48 417 aaPredicted RBP22.37■■□□□ 1.17
RNF40-203ENST00000493683 KIF3CO14782 793 aa22.37■■□□□ 1.17
RNF40-203ENST00000493683 UAP1Q16222 522 aaPredicted RBP22.37■■□□□ 1.17
RNF40-203ENST00000493683 MCUR1Q96AQ8 359 aa22.37■■□□□ 1.17
RNF40-203ENST00000493683 RAB17Q9H0T7 212 aa22.37■■□□□ 1.17
RNF40-203ENST00000493683 CPSF2Q9P2I0 782 aaKnown RBP22.37■■□□□ 1.17
RNF40-203ENST00000493683 TCOF1Q13428 1488 aaKnown RBP22.37■■□□□ 1.17
RNF40-203ENST00000493683 COL17A1Q9UMD9 1497 aaPredicted RBP22.36■■□□□ 1.17
RNF40-203ENST00000493683 RPS6KA1Q15418 735 aa22.36■■□□□ 1.17
RNF40-203ENST00000493683 CDAN1Q8IWY9 1227 aa22.36■■□□□ 1.17
RNF40-203ENST00000493683 ACSBG1Q96GR2 724 aa22.36■■□□□ 1.17
RNF40-203ENST00000493683 LRWD1Q9UFC0 647 aa22.36■■□□□ 1.17
RNF40-203ENST00000493683 ARHGEF35A5YM69 484 aa22.36■■□□□ 1.17
RNF40-203ENST00000493683 CASQ2O14958 399 aaPredicted RBP22.36■■□□□ 1.17
RNF40-203ENST00000493683 GPAA1O43292 621 aa22.36■■□□□ 1.17
RNF40-203ENST00000493683 MAP7Q14244 749 aa22.36■■□□□ 1.17
RNF40-203ENST00000493683 GKAP1Q5VSY0 366 aaPredicted RBP22.36■■□□□ 1.17
RNF40-203ENST00000493683 DSCC1Q9BVC3 393 aa22.36■■□□□ 1.17
RNF40-203ENST00000493683 BCAP29Q9UHQ4 241 aa22.36■■□□□ 1.17
RNF40-203ENST00000493683 HHATQ5VTY9 493 aa22.36■■□□□ 1.17
RNF40-203ENST00000493683 PHLDB2Q86SQ0 1253 aa22.36■■□□□ 1.17
RNF40-203ENST00000493683 VSIG1Q86XK7 387 aa22.36■■□□□ 1.17
RNF40-203ENST00000493683 ZBTB21Q9ULJ3 1066 aa22.36■■□□□ 1.17
RNF40-203ENST00000493683 CTTNBP2NLQ9P2B4 639 aa22.35■■□□□ 1.17
RNF40-203ENST00000493683 PDE8AO60658 829 aa22.35■■□□□ 1.17
RNF40-203ENST00000493683 CRCPO75575 148 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms