RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 FRAT1Q92837 279 aaPredicted RBP21.42■■□□□ 1.02
COL9A1-210ENST00000493682 COL2A1P02458 1487 aaPredicted RBP21.41■■□□□ 1.02
COL9A1-210ENST00000493682 TNPO2O14787 897 aaKnown RBP21.41■■□□□ 1.02
COL9A1-210ENST00000493682 MCAMP43121 646 aa21.41■■□□□ 1.02
COL9A1-210ENST00000493682 TREML2Q5T2D2 321 aa21.41■■□□□ 1.02
COL9A1-210ENST00000493682 DPF3Q92784 378 aa21.41■■□□□ 1.02
COL9A1-210ENST00000493682 CLUAP1Q96AJ1 413 aa21.41■■□□□ 1.02
COL9A1-210ENST00000493682 OSBPL5Q9H0X9 879 aaPredicted RBP21.41■■□□□ 1.02
COL9A1-210ENST00000493682 UNC93B1Q9H1C4 597 aa21.41■■□□□ 1.02
COL9A1-210ENST00000493682 UQCRFS1P1P0C7P4 283 aa21.4■■□□□ 1.02
COL9A1-210ENST00000493682 ELNP15502 786 aa21.4■■□□□ 1.02
COL9A1-210ENST00000493682 ANKRD13CQ8N6S4 541 aa21.4■■□□□ 1.02
COL9A1-210ENST00000493682 LRP2BPQ9P2M1 347 aa21.4■■□□□ 1.02
COL9A1-210ENST00000493682 SPP2Q13103 211 aa21.39■■□□□ 1.01
COL9A1-210ENST00000493682 IRF5Q13568 498 aa21.39■■□□□ 1.01
COL9A1-210ENST00000493682 TEX11Q8IYF3 940 aa21.39■■□□□ 1.01
COL9A1-210ENST00000493682 PROCA1Q8NCQ7 364 aaPredicted RBP21.39■■□□□ 1.01
COL9A1-210ENST00000493682 ZNF280CQ8ND82 737 aa21.39■■□□□ 1.01
COL9A1-210ENST00000493682 PXYLP1Q8TE99 480 aa21.39■■□□□ 1.01
COL9A1-210ENST00000493682 U2AF1L4Q8WU68 220 aaKnown RBP21.39■■□□□ 1.01
COL9A1-210ENST00000493682 PNMA3Q9UL41 463 aa21.39■■□□□ 1.01
COL9A1-210ENST00000493682 CAP2P40123 477 aa21.38■■□□□ 1.01
COL9A1-210ENST00000493682 RRP1BQ14684 758 aaKnown RBP21.38■■□□□ 1.01
COL9A1-210ENST00000493682 SH3RF3Q8TEJ3 882 aaPredicted RBP21.38■■□□□ 1.01
COL9A1-210ENST00000493682 SGPL1O95470 568 aa21.37■■□□□ 1.01
COL9A1-210ENST00000493682 INHAP05111 366 aa21.37■■□□□ 1.01
COL9A1-210ENST00000493682 HTATIP2Q9BUP3 242 aa21.37■■□□□ 1.01
COL9A1-210ENST00000493682 TBC1D2Q9BYX2 928 aa21.37■■□□□ 1.01
COL9A1-210ENST00000493682 USP17L5A8MUK1 530 aa21.36■■□□□ 1.01
COL9A1-210ENST00000493682 FARP2O94887 1054 aaPredicted RBP21.36■■□□□ 1.01
COL9A1-210ENST00000493682 HMGCS2P54868 508 aa21.36■■□□□ 1.01
COL9A1-210ENST00000493682 FAM110CQ1W6H9 321 aa21.36■■□□□ 1.01
COL9A1-210ENST00000493682 CHRDL2Q6WN34 429 aa21.36■■□□□ 1.01
COL9A1-210ENST00000493682 TMEM57Q8N5G2 664 aa21.36■■□□□ 1.01
COL9A1-210ENST00000493682 COA7Q96BR5 231 aa21.36■■□□□ 1.01
COL9A1-210ENST00000493682 NOL10Q9BSC4 688 aaKnown RBP21.36■■□□□ 1.01
COL9A1-210ENST00000493682 SNRKQ9NRH2 765 aa21.36■■□□□ 1.01
COL9A1-210ENST00000493682 HERC5Q9UII4 1024 aaKnown RBP21.36■■□□□ 1.01
COL9A1-210ENST00000493682 POLA2Q14181 598 aa21.35■■□□□ 1.01
COL9A1-210ENST00000493682 TNNI3KQ59H18 835 aa21.35■■□□□ 1.01
COL9A1-210ENST00000493682 NAA16Q6N069 864 aaPredicted RBP21.35■■□□□ 1.01
COL9A1-210ENST00000493682 GPR108Q9NPR9 543 aa21.35■■□□□ 1.01
COL9A1-210ENST00000493682 PI4KBQ9UBF8 816 aa21.35■■□□□ 1.01
COL9A1-210ENST00000493682 TAOK2Q9UL54 1235 aa21.35■■□□□ 1.01
COL9A1-210ENST00000493682 FPGT-TNNI3KV9GXZ4 949 aa21.35■■□□□ 1.01
COL9A1-210ENST00000493682 LOC285556D6RIA3 1793 aa21.35■■□□□ 1.01
COL9A1-210ENST00000493682 CEP290O15078 2479 aa21.35■■□□□ 1.01
COL9A1-210ENST00000493682 BAG3O95817 575 aa21.34■■□□□ 1.01
COL9A1-210ENST00000493682 GCLCP48506 637 aaPredicted RBP21.34■■□□□ 1.01
COL9A1-210ENST00000493682 PABPC4Q13310 644 aaKnown RBP eCLIP21.34■■□□□ 1.01
COL9A1-210ENST00000493682 TTC39AQ5SRH9 613 aa21.34■■□□□ 1.01
COL9A1-210ENST00000493682 DBNDD2Q9BQY9 259 aa21.34■■□□□ 1.01
COL9A1-210ENST00000493682 AATFQ9NY61 560 aaKnown RBP eCLIP21.34■■□□□ 1.01
COL9A1-210ENST00000493682 ATAD5Q96QE3 1844 aa21.34■■□□□ 1.01
COL9A1-210ENST00000493682 TFRCP02786 760 aaKnown RBP21.33■■□□□ 1.01
COL9A1-210ENST00000493682 PLCG2P16885 1265 aa21.33■■□□□ 1.01
COL9A1-210ENST00000493682 PPP4CP60510 307 aa21.33■■□□□ 1.01
COL9A1-210ENST00000493682 SH3D19Q5HYK7 790 aa21.33■■□□□ 1.01
COL9A1-210ENST00000493682 CCDC158Q5M9N0 1113 aa21.33■■□□□ 1.01
COL9A1-210ENST00000493682 ZKSCAN2Q63HK3 967 aa21.33■■□□□ 1.01
COL9A1-210ENST00000493682 SSH3Q8TE77 659 aa21.33■■□□□ 1.01
COL9A1-210ENST00000493682 DEFB118Q96PH6 123 aa21.33■■□□□ 1.01
COL9A1-210ENST00000493682 ASCC2Q9H1I8 757 aaPredicted RBP21.33■■□□□ 1.01
COL9A1-210ENST00000493682 DHX36Q9H2U1 1008 aaKnown RBP21.33■■□□□ 1.01
COL9A1-210ENST00000493682 AS3MTQ9HBK9 375 aa21.33■■□□□ 1.01
COL9A1-210ENST00000493682 PAK6Q9NQU5 681 aaPredicted RBP21.33■■□□□ 1.01
COL9A1-210ENST00000493682 RBM27Q9P2N5 1060 aaKnown RBP21.33■■□□□ 1.01
COL9A1-210ENST00000493682 CYP2E1P05181 493 aaPredicted RBP21.32■■□□□ 1
COL9A1-210ENST00000493682 ATP8B2P98198 1209 aa21.32■■□□□ 1
COL9A1-210ENST00000493682 OS9Q13438 667 aaPredicted RBP21.32■■□□□ 1
COL9A1-210ENST00000493682 ADGRA1Q86SQ6 560 aa21.32■■□□□ 1
COL9A1-210ENST00000493682 TGFBRAP1Q8WUH2 860 aa21.32■■□□□ 1
COL9A1-210ENST00000493682 WDR18Q9BV38 432 aa21.32■■□□□ 1
COL9A1-210ENST00000493682 CAPN2P17655 700 aa21.31■■□□□ 1
COL9A1-210ENST00000493682 JAG1P78504 1218 aa21.31■■□□□ 1
COL9A1-210ENST00000493682 MAPKAPK5Q8IW41 473 aa21.31■■□□□ 1
COL9A1-210ENST00000493682 NR2E3Q9Y5X4 410 aa21.31■■□□□ 1
COL9A1-210ENST00000493682 SIPA1L1O43166 1804 aa21.31■■□□□ 1
COL9A1-210ENST00000493682 MAST2Q6P0Q8 1798 aa21.31■■□□□ 1
COL9A1-210ENST00000493682 FLT1P17948 1338 aa21.3■■□□□ 1
COL9A1-210ENST00000493682 SURF6O75683 361 aaKnown RBP21.3■■□□□ 1
COL9A1-210ENST00000493682 MTMR2Q13614 643 aa21.3■■□□□ 1
COL9A1-210ENST00000493682 METTL16Q86W50 562 aaKnown RBP21.3■■□□□ 1
COL9A1-210ENST00000493682 ZNF512BQ96KM6 892 aaPredicted RBP21.3■■□□□ 1
COL9A1-210ENST00000493682 CRISPLD2Q9H0B8 497 aa21.3■■□□□ 1
COL9A1-210ENST00000493682 DNAJC18Q9H819 358 aa21.3■■□□□ 1
COL9A1-210ENST00000493682 GJD2Q9UKL4 321 aa21.3■■□□□ 1
COL9A1-210ENST00000493682 TRIOBPQ9H2D6 2365 aa21.3■■□□□ 1
COL9A1-210ENST00000493682 DOCK3Q8IZD9 2030 aa21.29■■□□□ 1
COL9A1-210ENST00000493682 ZBTB7BO15156 539 aaPredicted RBP21.29■■□□□ 1
COL9A1-210ENST00000493682 ASNSP08243 561 aa21.29■■□□□ 1
COL9A1-210ENST00000493682 ZAP70P43403 619 aa21.29■■□□□ 1
COL9A1-210ENST00000493682 BACE1P56817 501 aa21.29■■□□□ 1
COL9A1-210ENST00000493682 FOXP4Q8IVH2 680 aaPredicted RBP21.29■■□□□ 1
COL9A1-210ENST00000493682 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.29■■□□□ 1
COL9A1-210ENST00000493682 PRO3102Q9H379 93 aa21.29■■□□□ 1
COL9A1-210ENST00000493682 C1orf115Q9H7X2 142 aa21.29■■□□□ 1
COL9A1-210ENST00000493682 PIH1D3Q9NQM4 214 aaKnown RBP21.29■■□□□ 1
COL9A1-210ENST00000493682 MORF4L1Q9UBU8 362 aa21.29■■□□□ 1
COL9A1-210ENST00000493682 PALD1Q9ULE6 856 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms