RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 OSBPL5Q9H0X9 879 aaPredicted RBP15.24■□□□□ 0.03
SAMM50-205ENST00000493621 HMG20BQ9P0W2 317 aa15.24■□□□□ 0.03
SAMM50-205ENST00000493621 PNMA3Q9UL41 463 aa15.24■□□□□ 0.03
SAMM50-205ENST00000493621 NPM3O75607 178 aaKnown RBP15.23■□□□□ 0.03
SAMM50-205ENST00000493621 LDHCP07864 332 aa15.23■□□□□ 0.03
SAMM50-205ENST00000493621 GSTO1P78417 241 aa15.23■□□□□ 0.03
SAMM50-205ENST00000493621 SPP2Q13103 211 aa15.23■□□□□ 0.03
SAMM50-205ENST00000493621 FAM110CQ1W6H9 321 aa15.23■□□□□ 0.03
SAMM50-205ENST00000493621 GORABQ5T7V8 394 aa15.23■□□□□ 0.03
SAMM50-205ENST00000493621 SPATA5Q8NB90 893 aa15.23■□□□□ 0.03
SAMM50-205ENST00000493621 PROCA1Q8NCQ7 364 aaPredicted RBP15.23■□□□□ 0.03
SAMM50-205ENST00000493621 NSUN4Q96CB9 384 aaKnown RBP15.23■□□□□ 0.03
SAMM50-205ENST00000493621 PRO3102Q9H379 93 aa15.23■□□□□ 0.03
SAMM50-205ENST00000493621 RAI14Q9P0K7 980 aa15.23■□□□□ 0.03
SAMM50-205ENST00000493621 COL2A1P02458 1487 aaPredicted RBP15.22■□□□□ 0.03
SAMM50-205ENST00000493621 EVI5O60447 810 aa15.22■□□□□ 0.03
SAMM50-205ENST00000493621 RARSP54136 660 aaKnown RBP15.22■□□□□ 0.03
SAMM50-205ENST00000493621 HMGCS2P54868 508 aa15.22■□□□□ 0.03
SAMM50-205ENST00000493621 MTX1Q13505 466 aa15.22■□□□□ 0.03
SAMM50-205ENST00000493621 ZNF280CQ8ND82 737 aa15.22■□□□□ 0.03
SAMM50-205ENST00000493621 PAK6Q9NQU5 681 aaPredicted RBP15.22■□□□□ 0.03
SAMM50-205ENST00000493621 CDK5RAP2Q96SN8 1893 aa15.22■□□□□ 0.03
SAMM50-205ENST00000493621 SIPA1L1O43166 1804 aa15.22■□□□□ 0.03
SAMM50-205ENST00000493621 MAP4K4O95819 1239 aaPredicted RBP15.21■□□□□ 0.03
SAMM50-205ENST00000493621 RRP1BQ14684 758 aaKnown RBP15.21■□□□□ 0.03
SAMM50-205ENST00000493621 TEX11Q8IYF3 940 aa15.21■□□□□ 0.03
SAMM50-205ENST00000493621 PLXNB2O15031 1838 aa15.21■□□□□ 0.03
SAMM50-205ENST00000493621 MYO5AQ9Y4I1 1855 aaKnown RBP15.2■□□□□ 0.02
SAMM50-205ENST00000493621 USP17L5A8MUK1 530 aa15.2■□□□□ 0.02
SAMM50-205ENST00000493621 CAPN2P17655 700 aa15.2■□□□□ 0.02
SAMM50-205ENST00000493621 ARID4AP29374 1257 aaPredicted RBP15.2■□□□□ 0.02
SAMM50-205ENST00000493621 CAP2P40123 477 aa15.2■□□□□ 0.02
SAMM50-205ENST00000493621 GCLCP48506 637 aaPredicted RBP15.2■□□□□ 0.02
SAMM50-205ENST00000493621 PABPC4Q13310 644 aaKnown RBP eCLIP15.2■□□□□ 0.023e-13■□□□□ 9.3
SAMM50-205ENST00000493621 ARHGAP45Q92619 1136 aa15.2■□□□□ 0.02
SAMM50-205ENST00000493621 PAWRQ96IZ0 340 aaKnown RBP15.2■□□□□ 0.02
SAMM50-205ENST00000493621 TBC1D2Q9BYX2 928 aa15.2■□□□□ 0.02
SAMM50-205ENST00000493621 CRISPLD2Q9H0B8 497 aa15.2■□□□□ 0.02
SAMM50-205ENST00000493621 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.2■□□□□ 0.02
SAMM50-205ENST00000493621 ASCC2Q9H1I8 757 aaPredicted RBP15.2■□□□□ 0.02
SAMM50-205ENST00000493621 LRP2BPQ9P2M1 347 aa15.2■□□□□ 0.02
SAMM50-205ENST00000493621 MAST2Q6P0Q8 1798 aa15.2■□□□□ 0.02
SAMM50-205ENST00000493621 FOCADQ5VW36 1801 aa15.2■□□□□ 0.02
SAMM50-205ENST00000493621 MCAMP43121 646 aa15.19■□□□□ 0.02
SAMM50-205ENST00000493621 SH3RF3Q8TEJ3 882 aaPredicted RBP15.19■□□□□ 0.02
SAMM50-205ENST00000493621 DIS3LQ8TF46 1054 aaKnown RBP15.19■□□□□ 0.02
SAMM50-205ENST00000493621 NOL10Q9BSC4 688 aaKnown RBP15.19■□□□□ 0.02
SAMM50-205ENST00000493621 DDX60LQ5H9U9 1706 aaKnown RBP15.18■□□□□ 0.02
SAMM50-205ENST00000493621 HMGCRP04035 888 aa15.18■□□□□ 0.02
SAMM50-205ENST00000493621 GNAI2P04899 355 aa15.18■□□□□ 0.02
SAMM50-205ENST00000493621 G3BP1Q13283 466 aaKnown RBP eCLIP15.18■□□□□ 0.02
SAMM50-205ENST00000493621 SH3D19Q5HYK7 790 aa15.18■□□□□ 0.02
SAMM50-205ENST00000493621 NECAB2Q7Z6G3 386 aa15.18■□□□□ 0.02
SAMM50-205ENST00000493621 AS3MTQ9HBK9 375 aa15.18■□□□□ 0.02
SAMM50-205ENST00000493621 STAP2Q9UGK3 403 aa15.18■□□□□ 0.02
SAMM50-205ENST00000493621 HERC5Q9UII4 1024 aaKnown RBP15.18■□□□□ 0.02
SAMM50-205ENST00000493621 TNNQ9UQP3 1299 aa15.18■□□□□ 0.02
SAMM50-205ENST00000493621 PNMA6EA0A0J9YXQ4 647 aa15.17■□□□□ 0.02
SAMM50-205ENST00000493621 UQCRFS1P1P0C7P4 283 aa15.17■□□□□ 0.02
SAMM50-205ENST00000493621 TRIM32Q13049 653 aa15.17■□□□□ 0.02
SAMM50-205ENST00000493621 SNRKQ9NRH2 765 aa15.17■□□□□ 0.02
SAMM50-205ENST00000493621 AATFQ9NY61 560 aaKnown RBP eCLIP15.17■□□□□ 0.02
SAMM50-205ENST00000493621 PI4KBQ9UBF8 816 aa15.17■□□□□ 0.02
SAMM50-205ENST00000493621 GJD2Q9UKL4 321 aa15.17■□□□□ 0.02
SAMM50-205ENST00000493621 A0A1W2PPC1 479 aa15.16■□□□□ 0.02
SAMM50-205ENST00000493621 TRIM27P14373 513 aa15.16■□□□□ 0.02
SAMM50-205ENST00000493621 IRX3P78415 501 aaPredicted RBP15.16■□□□□ 0.02
SAMM50-205ENST00000493621 MTMR2Q13614 643 aa15.16■□□□□ 0.02
SAMM50-205ENST00000493621 NAA16Q6N069 864 aaPredicted RBP15.16■□□□□ 0.02
SAMM50-205ENST00000493621 ANKLE1Q8NAG6 615 aa15.16■□□□□ 0.02
SAMM50-205ENST00000493621 FRAT1Q92837 279 aaPredicted RBP15.16■□□□□ 0.02
SAMM50-205ENST00000493621 WDR18Q9BV38 432 aa15.16■□□□□ 0.02
SAMM50-205ENST00000493621 DHX36Q9H2U1 1008 aaKnown RBP15.16■□□□□ 0.02
SAMM50-205ENST00000493621 HMX1Q9NP08 348 aaPredicted RBP15.16■□□□□ 0.02
SAMM50-205ENST00000493621 MORF4L1Q9UBU8 362 aa15.16■□□□□ 0.02
SAMM50-205ENST00000493621 RPTORQ8N122 1335 aa15.16■□□□□ 0.02
SAMM50-205ENST00000493621 SOX1O00570 391 aaPredicted RBP15.15■□□□□ 0.02
SAMM50-205ENST00000493621 IPO8O15397 1037 aaKnown RBP15.15■□□□□ 0.02
SAMM50-205ENST00000493621 PEX10O60683 326 aa15.15■□□□□ 0.02
SAMM50-205ENST00000493621 BAG3O95817 575 aa15.15■□□□□ 0.02
SAMM50-205ENST00000493621 JAG1P78504 1218 aa15.15■□□□□ 0.02
SAMM50-205ENST00000493621 TTC39AQ5SRH9 613 aa15.15■□□□□ 0.02
SAMM50-205ENST00000493621 MAPKAPK5Q8IW41 473 aa15.15■□□□□ 0.02
SAMM50-205ENST00000493621 C7orf61Q8IZ16 206 aa15.15■□□□□ 0.02
SAMM50-205ENST00000493621 TGFBRAP1Q8WUH2 860 aa15.15■□□□□ 0.02
SAMM50-205ENST00000493621 CLUAP1Q96AJ1 413 aa15.15■□□□□ 0.02
SAMM50-205ENST00000493621 TMOD4Q9NZQ9 345 aa15.15■□□□□ 0.02
SAMM50-205ENST00000493621 MYH1P12882 1939 aa15.15■□□□□ 0.02
SAMM50-205ENST00000493621 GDF11O95390 407 aa15.14■□□□□ 0.01
SAMM50-205ENST00000493621 ASNSP08243 561 aa15.14■□□□□ 0.01
SAMM50-205ENST00000493621 PLCG2P16885 1265 aa15.14■□□□□ 0.01
SAMM50-205ENST00000493621 CYP2B6P20813 491 aa15.14■□□□□ 0.01
SAMM50-205ENST00000493621 BACE1P56817 501 aa15.14■□□□□ 0.01
SAMM50-205ENST00000493621 SHROOM1Q2M3G4 852 aaPredicted RBP15.14■□□□□ 0.01
SAMM50-205ENST00000493621 ATF7IPQ6VMQ6 1270 aa15.14■□□□□ 0.01
SAMM50-205ENST00000493621 CRACR2BQ8N4Y2 399 aaPredicted RBP15.14■□□□□ 0.01
SAMM50-205ENST00000493621 TRIB2Q92519 343 aa15.14■□□□□ 0.01
SAMM50-205ENST00000493621 LRCH3Q96II8 777 aa15.14■□□□□ 0.01
SAMM50-205ENST00000493621 P2RX7Q99572 595 aaKnown RBP15.14■□□□□ 0.01
SAMM50-205ENST00000493621 TRIM34Q9BYJ4 488 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms