RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 ATAD5Q96QE3 1844 aa14.36□□□□□ -0.11
MDC1-207ENST00000492462 PTPRAP18433 802 aa14.36□□□□□ -0.11
MDC1-207ENST00000492462 CD99L2Q8TCZ2 262 aa14.36□□□□□ -0.11
MDC1-207ENST00000492462 DNAJC2Q99543 621 aaKnown RBP14.36□□□□□ -0.11
MDC1-207ENST00000492462 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.36□□□□□ -0.11
MDC1-207ENST00000492462 SAP30BPQ9UHR5 308 aaKnown RBP14.36□□□□□ -0.11
MDC1-207ENST00000492462 PCDHB15Q9Y5E8 787 aa14.36□□□□□ -0.11
MDC1-207ENST00000492462 ZHX2Q9Y6X8 837 aa14.36□□□□□ -0.11
MDC1-207ENST00000492462 FLT1P17948 1338 aa14.36□□□□□ -0.11
MDC1-207ENST00000492462 MYH1P12882 1939 aa14.35□□□□□ -0.11
MDC1-207ENST00000492462 GOLIM4O00461 696 aa14.35□□□□□ -0.11
MDC1-207ENST00000492462 TBC1D12O60347 775 aa14.35□□□□□ -0.11
MDC1-207ENST00000492462 PLCG2P16885 1265 aa14.35□□□□□ -0.11
MDC1-207ENST00000492462 MAP3K12Q12852 859 aa14.35□□□□□ -0.11
MDC1-207ENST00000492462 SLC4A8Q2Y0W8 1093 aa14.35□□□□□ -0.11
MDC1-207ENST00000492462 SLFNL1Q499Z3 407 aa14.35□□□□□ -0.11
MDC1-207ENST00000492462 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.35□□□□□ -0.11
MDC1-207ENST00000492462 ZFYVE28Q9HCC9 887 aa14.35□□□□□ -0.11
MDC1-207ENST00000492462 PICK1Q9NRD5 415 aa14.35□□□□□ -0.11
MDC1-207ENST00000492462 PALD1Q9ULE6 856 aa14.35□□□□□ -0.11
MDC1-207ENST00000492462 HTTP42858 3142 aa14.35□□□□□ -0.11
MDC1-207ENST00000492462 CTNND1O60716 968 aaKnown RBP14.34□□□□□ -0.11
MDC1-207ENST00000492462 PDE6AP16499 860 aa14.34□□□□□ -0.11
MDC1-207ENST00000492462 JAG1P78504 1218 aa14.34□□□□□ -0.11
MDC1-207ENST00000492462 SP3Q02447 781 aa14.34□□□□□ -0.11
MDC1-207ENST00000492462 SHROOM1Q2M3G4 852 aaPredicted RBP14.34□□□□□ -0.11
MDC1-207ENST00000492462 GPAT2Q6NUI2 795 aa14.34□□□□□ -0.11
MDC1-207ENST00000492462 OTOP1Q7RTM1 612 aa14.34□□□□□ -0.11
MDC1-207ENST00000492462 LRRCC1Q9C099 1032 aa14.34□□□□□ -0.11
MDC1-207ENST00000492462 BOLA2Q9H3K6 86 aa14.34□□□□□ -0.11
MDC1-207ENST00000492462 DCTPP1Q9H773 170 aa14.34□□□□□ -0.11
MDC1-207ENST00000492462 DNAJC18Q9H819 358 aa14.34□□□□□ -0.11
MDC1-207ENST00000492462 AFG3L2Q9Y4W6 797 aa14.34□□□□□ -0.11
MDC1-207ENST00000492462 TRIM17Q9Y577 477 aa14.34□□□□□ -0.11
MDC1-207ENST00000492462 COL6A3P12111 3177 aa14.33□□□□□ -0.12
MDC1-207ENST00000492462 PDHXO00330 501 aa14.33□□□□□ -0.12
MDC1-207ENST00000492462 IGSF3O75054 1194 aa14.33□□□□□ -0.12
MDC1-207ENST00000492462 CHGBP05060 677 aa14.33□□□□□ -0.12
MDC1-207ENST00000492462 ATP5JP18859 108 aa14.33□□□□□ -0.12
MDC1-207ENST00000492462 ANKRD23Q86SG2 305 aa14.33□□□□□ -0.12
MDC1-207ENST00000492462 CRBNQ96SW2 442 aa14.33□□□□□ -0.12
MDC1-207ENST00000492462 RIOK1Q9BRS2 568 aaKnown RBP14.33□□□□□ -0.12
MDC1-207ENST00000492462 A0A0G2JLL6 359 aaPredicted RBP14.32□□□□□ -0.12
MDC1-207ENST00000492462 TCRBV5S4A2TA0A5A2 114 aa14.32□□□□□ -0.12
MDC1-207ENST00000492462 TRIM75PA6NK02 468 aa14.32□□□□□ -0.12
MDC1-207ENST00000492462 CXCL11O14625 94 aa14.32□□□□□ -0.12
MDC1-207ENST00000492462 ECM2O94769 699 aaPredicted RBP14.32□□□□□ -0.12
MDC1-207ENST00000492462 PKN2Q16513 984 aaKnown RBP14.32□□□□□ -0.12
MDC1-207ENST00000492462 SLC9C2Q5TAH2 1124 aa14.32□□□□□ -0.12
MDC1-207ENST00000492462 FBXO46Q6PJ61 603 aaPredicted RBP14.32□□□□□ -0.12
MDC1-207ENST00000492462 PRRT2Q7Z6L0 340 aaPredicted RBP14.32□□□□□ -0.12
MDC1-207ENST00000492462 ERO1AQ96HE7 468 aa14.32□□□□□ -0.12
MDC1-207ENST00000492462 ARHGAP39Q9C0H5 1083 aa14.32□□□□□ -0.12
MDC1-207ENST00000492462 DHX36Q9H2U1 1008 aaKnown RBP14.32□□□□□ -0.12
MDC1-207ENST00000492462 ZCCHC17Q9NP64 241 aaKnown RBP14.32□□□□□ -0.12
MDC1-207ENST00000492462 PAG1Q9NWQ8 432 aa14.32□□□□□ -0.12
MDC1-207ENST00000492462 PI4KBQ9UBF8 816 aa14.32□□□□□ -0.12
MDC1-207ENST00000492462 ADGRA2Q96PE1 1338 aa14.32□□□□□ -0.12
MDC1-207ENST00000492462 ZNF532Q9HCE3 1301 aa14.32□□□□□ -0.12
MDC1-207ENST00000492462 MYH7P12883 1935 aa14.31□□□□□ -0.12
MDC1-207ENST00000492462 TRIOBPQ9H2D6 2365 aa14.31□□□□□ -0.12
MDC1-207ENST00000492462 TLR2O60603 784 aa14.31□□□□□ -0.12
MDC1-207ENST00000492462 CYP2C8P10632 490 aa14.31□□□□□ -0.12
MDC1-207ENST00000492462 CAP2P40123 477 aa14.31□□□□□ -0.12
MDC1-207ENST00000492462 USP5P45974 858 aa14.31□□□□□ -0.12
MDC1-207ENST00000492462 EVX2Q03828 476 aa14.31□□□□□ -0.12
MDC1-207ENST00000492462 TTF1Q15361 905 aaPredicted RBP14.31□□□□□ -0.12
MDC1-207ENST00000492462 TSHZ3Q63HK5 1081 aa14.31□□□□□ -0.12
MDC1-207ENST00000492462 METTL16Q86W50 562 aaKnown RBP14.31□□□□□ -0.12
MDC1-207ENST00000492462 HAUS7Q99871 368 aa14.31□□□□□ -0.12
MDC1-207ENST00000492462 CPA4Q9UI42 421 aa14.31□□□□□ -0.12
MDC1-207ENST00000492462 HERC5Q9UII4 1024 aaKnown RBP14.31□□□□□ -0.12
MDC1-207ENST00000492462 DDX60LQ5H9U9 1706 aaKnown RBP14.31□□□□□ -0.12
MDC1-207ENST00000492462 NAV1Q8NEY1 1877 aa14.31□□□□□ -0.12
MDC1-207ENST00000492462 MAGEB6P1A0A0J9YX57 407 aa14.3□□□□□ -0.12
MDC1-207ENST00000492462 SPP2Q13103 211 aa14.3□□□□□ -0.12
MDC1-207ENST00000492462 C17orf99Q6UX52 265 aa14.3□□□□□ -0.12
MDC1-207ENST00000492462 GADL1Q6ZQY3 521 aa14.3□□□□□ -0.12
MDC1-207ENST00000492462 FOXP4Q8IVH2 680 aaPredicted RBP14.3□□□□□ -0.12
MDC1-207ENST00000492462 EFCC1Q9HA90 598 aa14.3□□□□□ -0.12
MDC1-207ENST00000492462 GDF11O95390 407 aa14.29□□□□□ -0.12
MDC1-207ENST00000492462 CTGFP29279 349 aa14.29□□□□□ -0.12
MDC1-207ENST00000492462 LCORLQ8N3X6 602 aa14.29□□□□□ -0.12
MDC1-207ENST00000492462 CRACR2BQ8N4Y2 399 aaPredicted RBP14.29□□□□□ -0.12
MDC1-207ENST00000492462 OTUD7AQ8TE49 926 aaPredicted RBP14.29□□□□□ -0.12
MDC1-207ENST00000492462 ARMT1Q9H993 441 aa14.29□□□□□ -0.12
MDC1-207ENST00000492462 PTPN22Q9Y2R2 807 aa14.29□□□□□ -0.12
MDC1-207ENST00000492462 CENPFP49454 3210 aa14.28□□□□□ -0.12
MDC1-207ENST00000492462 LOC285556D6RIA3 1793 aa14.28□□□□□ -0.12
MDC1-207ENST00000492462 PRKAB2O43741 272 aa14.28□□□□□ -0.12
MDC1-207ENST00000492462 ADD2P35612 726 aa14.28□□□□□ -0.12
MDC1-207ENST00000492462 TREML2Q5T2D2 321 aa14.28□□□□□ -0.12
MDC1-207ENST00000492462 TMED8Q6PL24 325 aaPredicted RBP14.28□□□□□ -0.12
MDC1-207ENST00000492462 FASTKD5Q7L8L6 764 aaKnown RBP14.28□□□□□ -0.12
MDC1-207ENST00000492462 SDR42E1Q8WUS8 393 aa14.28□□□□□ -0.12
MDC1-207ENST00000492462 ECHDC1Q9NTX5 307 aa14.28□□□□□ -0.12
MDC1-207ENST00000492462 BAZ2AQ9UIF9 1905 aaKnown RBP14.28□□□□□ -0.12
MDC1-207ENST00000492462 COLQQ9Y215 455 aaPredicted RBP14.28□□□□□ -0.12
MDC1-207ENST00000492462 KIAA0100Q14667 2235 aaKnown RBP14.27□□□□□ -0.12
MDC1-207ENST00000492462 USP17L5A8MUK1 530 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms